RNA–Protein interactions for RNA: ENST00000449544.5

HCG18-238, Transcript of HLA complex group 18, human

TSL 2 BASIC

Gene HCG18, Length 4,262 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HCG18-238	ENST00000449544	ADAD2	Q8NCV1	583 aa	Known RBP	7.04	□□□□□ -1.28
HCG18-238	ENST00000449544	DERL3	Q96Q80	235 aa		7.04	□□□□□ -1.28
HCG18-238	ENST00000449544	MED28	Q9H204	178 aa		7.04	□□□□□ -1.28
HCG18-238	ENST00000449544	CACFD1	Q9UGQ2	172 aa		7.04	□□□□□ -1.28
HCG18-238	ENST00000449544	HIST1H1D	P16402	221 aa	Known RBP	7.04	□□□□□ -1.28
HCG18-238	ENST00000449544	RHOB	P62745	196 aa		7.04	□□□□□ -1.28
HCG18-238	ENST00000449544	CD69	Q07108	199 aa		7.04	□□□□□ -1.28
HCG18-238	ENST00000449544	PNLIPRP3	Q17RR3	467 aa		7.04	□□□□□ -1.28
HCG18-238	ENST00000449544	LINC01590	Q5TEZ4	76 aa		7.04	□□□□□ -1.28
HCG18-238	ENST00000449544	LCNL1	Q6ZST4	164 aa		7.04	□□□□□ -1.28
HCG18-238	ENST00000449544	SAXO1	Q8IYX7	474 aa		7.04	□□□□□ -1.28
HCG18-238	ENST00000449544	LRRC75A	Q8NAA5	344 aa		7.04	□□□□□ -1.28
HCG18-238	ENST00000449544	FUNDC2	Q9BWH2	189 aa		7.04	□□□□□ -1.28
HCG18-238	ENST00000449544	WDR12	Q9GZL7	423 aa	Known RBP	7.04	□□□□□ -1.28
HCG18-238	ENST00000449544	C19orf12	Q9NSK7	152 aa		7.04	□□□□□ -1.28
HCG18-238	ENST00000449544	IGLV3-9	A0A075B6K5	115 aa		7.04	□□□□□ -1.28
HCG18-238	ENST00000449544	TRAV6	A0A075B6T7	132 aa		7.04	□□□□□ -1.28
HCG18-238	ENST00000449544	GPR31	O00270	319 aa		7.04	□□□□□ -1.28
HCG18-238	ENST00000449544	SRSF7	Q16629	238 aa	Known RBP eCLIP	7.04	□□□□□ -1.28
HCG18-238	ENST00000449544	TEX38	Q6PEX7	206 aa		7.04	□□□□□ -1.28
HCG18-238	ENST00000449544	LGI3	Q8N145	548 aa		7.04	□□□□□ -1.28
HCG18-238	ENST00000449544	OR13F1	Q8NGS4	319 aa		7.04	□□□□□ -1.28
HCG18-238	ENST00000449544	MBD6	Q96DN6	1003 aa		7.04	□□□□□ -1.28
HCG18-238	ENST00000449544	MCRIP2	Q9BUT9	160 aa	Known RBP	7.04	□□□□□ -1.28
HCG18-238	ENST00000449544	C19orf24	Q9BVV8	132 aa		7.04	□□□□□ -1.28
HCG18-238	ENST00000449544	FBXL15	Q9H469	300 aa		7.04	□□□□□ -1.28
HCG18-238	ENST00000449544	CRLF1	O75462	422 aa		7.04	□□□□□ -1.28
HCG18-238	ENST00000449544	TBP	P20226	339 aa		7.04	□□□□□ -1.28
HCG18-238	ENST00000449544	LPAR6	P43657	344 aa		7.04	□□□□□ -1.28
HCG18-238	ENST00000449544	TAS2R20	P59543	309 aa		7.04	□□□□□ -1.28
HCG18-238	ENST00000449544	GSG1L	Q6UXU4	331 aa		7.04	□□□□□ -1.28
HCG18-238	ENST00000449544	BVES	Q8NE79	360 aa		7.04	□□□□□ -1.28
HCG18-238	ENST00000449544	OR51I2	Q9H344	312 aa		7.04	□□□□□ -1.28
HCG18-238	ENST00000449544	RHOF	Q9HBH0	211 aa		7.04	□□□□□ -1.28
HCG18-238	ENST00000449544	PLCXD1	Q9NUJ7	323 aa		7.04	□□□□□ -1.28
HCG18-238	ENST00000449544	PEMT	Q9UBM1	199 aa		7.04	□□□□□ -1.28
HCG18-238	ENST00000449544	EXOG	Q9Y2C4	368 aa	Known RBP	7.04	□□□□□ -1.28
HCG18-238	ENST00000449544	HPGDS	O60760	199 aa		7.03	□□□□□ -1.28
HCG18-238	ENST00000449544	IDO2	Q6ZQW0	420 aa		7.03	□□□□□ -1.28
HCG18-238	ENST00000449544	PPP1R27	Q86WC6	154 aa		7.03	□□□□□ -1.28
HCG18-238	ENST00000449544	CALHM1	Q8IU99	346 aa		7.03	□□□□□ -1.28
HCG18-238	ENST00000449544	DYRK2	Q92630	601 aa		7.03	□□□□□ -1.28
HCG18-238	ENST00000449544	DGCR14	Q96DF8	476 aa	Known RBP	7.03	□□□□□ -1.28
HCG18-238	ENST00000449544	JKAMP	Q9P055	326 aa		7.03	□□□□□ -1.28
HCG18-238	ENST00000449544	IGHV4-31	P0DP07	118 aa		7.03	□□□□□ -1.28
HCG18-238	ENST00000449544	RCC1	P18754	421 aa	Predicted RBP	7.03	□□□□□ -1.28
HCG18-238	ENST00000449544	ZP3	P21754	424 aa		7.03	□□□□□ -1.28
HCG18-238	ENST00000449544	NTF4	P34130	210 aa		7.03	□□□□□ -1.28
HCG18-238	ENST00000449544	KIR3DL2	P43630	455 aa		7.03	□□□□□ -1.28
HCG18-238	ENST00000449544	OR1L8	Q8NGR8	309 aa		7.03	□□□□□ -1.28
HCG18-238	ENST00000449544	JPT1	Q9UK76	154 aa		7.03	□□□□□ -1.28
HCG18-238	ENST00000449544	DSP	P15924	2871 aa	Known RBP	7.03	□□□□□ -1.28
HCG18-238	ENST00000449544	MLNR	O43193	412 aa		7.03	□□□□□ -1.28
HCG18-238	ENST00000449544	IGHV4-59	P01825	116 aa		7.03	□□□□□ -1.28
HCG18-238	ENST00000449544	FGF2	P09038	288 aa		7.03	□□□□□ -1.28
HCG18-238	ENST00000449544	NQO2	P16083	231 aa		7.03	□□□□□ -1.28
HCG18-238	ENST00000449544	ZNF26	P17031	533 aa	Predicted RBP	7.03	□□□□□ -1.28
HCG18-238	ENST00000449544	GP2	P55259	537 aa	Known RBP	7.03	□□□□□ -1.28
HCG18-238	ENST00000449544	STEAP1B	Q6NZ63	245 aa		7.03	□□□□□ -1.28
HCG18-238	ENST00000449544		Q6ZRG5	221 aa		7.03	□□□□□ -1.28
HCG18-238	ENST00000449544	OR5M8	Q8NGP6	311 aa		7.03	□□□□□ -1.28
HCG18-238	ENST00000449544	EXOSC5	Q9NQT4	235 aa	Known RBP eCLIP	7.03	□□□□□ -1.28
HCG18-238	ENST00000449544	NUDT15	Q9NV35	164 aa		7.03	□□□□□ -1.28
HCG18-238	ENST00000449544	TBL2	Q9Y4P3	447 aa	Known RBP	7.03	□□□□□ -1.28
HCG18-238	ENST00000449544	OR2F2	O95006	317 aa		7.02	□□□□□ -1.29
HCG18-238	ENST00000449544	RFX2	P48378	723 aa		7.02	□□□□□ -1.29
HCG18-238	ENST00000449544	SRSF2	Q01130	221 aa	Known RBP	7.02	□□□□□ -1.29
HCG18-238	ENST00000449544	ZNF273	Q14593	569 aa		7.02	□□□□□ -1.29
HCG18-238	ENST00000449544	MED12L	Q86YW9	2145 aa		7.02	□□□□□ -1.29
HCG18-238	ENST00000449544	KLHDC1	Q8N7A1	406 aa		7.02	□□□□□ -1.29
HCG18-238	ENST00000449544	OR8H1	Q8NGG4	311 aa		7.02	□□□□□ -1.29
HCG18-238	ENST00000449544	FBXO7	Q9Y3I1	522 aa		7.02	□□□□□ -1.29
HCG18-238	ENST00000449544	C5orf42	Q9H799	3197 aa		7.02	□□□□□ -1.29
HCG18-238	ENST00000449544	OOSP1	A8MZH6	123 aa		7.02	□□□□□ -1.29
HCG18-238	ENST00000449544	HTN1	P15515	57 aa		7.02	□□□□□ -1.29
HCG18-238	ENST00000449544	CD34	P28906	385 aa		7.02	□□□□□ -1.29
HCG18-238	ENST00000449544	MAB21L1	Q13394	359 aa		7.02	□□□□□ -1.29
HCG18-238	ENST00000449544	TMEM200B	Q69YZ2	307 aa		7.02	□□□□□ -1.29
HCG18-238	ENST00000449544	SLC35E4	Q6ICL7	350 aa		7.02	□□□□□ -1.29
HCG18-238	ENST00000449544	OR8G2P	Q6IF36	304 aa		7.02	□□□□□ -1.29
HCG18-238	ENST00000449544	ETFRF1	Q6IPR1	90 aa		7.02	□□□□□ -1.29
HCG18-238	ENST00000449544	RHOV	Q96L33	236 aa		7.02	□□□□□ -1.29
HCG18-238	ENST00000449544	MMP27	Q9H306	513 aa		7.02	□□□□□ -1.29
HCG18-238	ENST00000449544	AK3	Q9UIJ7	227 aa		7.02	□□□□□ -1.29
HCG18-238	ENST00000449544	IGHV2-26	A0A0B4J1V2	119 aa		7.02	□□□□□ -1.29
HCG18-238	ENST00000449544	NPIPB11	E5RHQ5	1161 aa		7.02	□□□□□ -1.29
HCG18-238	ENST00000449544	IL5	P05113	134 aa		7.02	□□□□□ -1.29
HCG18-238	ENST00000449544	IGHV1-8	P0DP01	117 aa		7.02	□□□□□ -1.29
HCG18-238	ENST00000449544	RPS27A	P62979	156 aa	Known RBP	7.02	□□□□□ -1.29
HCG18-238	ENST00000449544	MIDN	Q504T8	468 aa		7.02	□□□□□ -1.29
HCG18-238	ENST00000449544	MYPOP	Q86VE0	399 aa	Predicted RBP	7.02	□□□□□ -1.29
HCG18-238	ENST00000449544	PARP16	Q8N5Y8	322 aa		7.02	□□□□□ -1.29
HCG18-238	ENST00000449544	DUSP18	Q8NEJ0	188 aa		7.02	□□□□□ -1.29
HCG18-238	ENST00000449544	OR4A4P	Q8NGN8	299 aa		7.02	□□□□□ -1.29
HCG18-238	ENST00000449544	RTN4IP1	Q8WWV3	396 aa	Predicted RBP	7.02	□□□□□ -1.29
HCG18-238	ENST00000449544	POFUT1	Q9H488	388 aa		7.02	□□□□□ -1.29
HCG18-238	ENST00000449544	SCPEP1	Q9HB40	452 aa		7.02	□□□□□ -1.29
HCG18-238	ENST00000449544	MTCH1	Q9NZJ7	389 aa		7.02	□□□□□ -1.29
HCG18-238	ENST00000449544	ZNF224	Q9NZL3	707 aa		7.02	□□□□□ -1.29
HCG18-238	ENST00000449544	RNF24	Q9Y225	148 aa		7.02	□□□□□ -1.29

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