RNA–Protein interactions for RNA: ENST00000448428.1

PRPF40A-203, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 5

Gene PRPF40A, Length 490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-203ENST00000448428 ODF3L1Q8IXM7 274 aa10.12□□□□□ -0.79
PRPF40A-203ENST00000448428 IZUMO1Q8IYV9 350 aa10.12□□□□□ -0.79
PRPF40A-203ENST00000448428 C5orf56Q8N8D9 126 aa10.12□□□□□ -0.79
PRPF40A-203ENST00000448428 OR56B1Q8NGI3 324 aa10.12□□□□□ -0.79
PRPF40A-203ENST00000448428 IL1F10Q8WWZ1 152 aa10.12□□□□□ -0.79
PRPF40A-203ENST00000448428 CITED2Q99967 270 aaPredicted RBP10.12□□□□□ -0.79
PRPF40A-203ENST00000448428 STUB1Q9UNE7 303 aa10.12□□□□□ -0.79
PRPF40A-203ENST00000448428 A0A0B4J203 849 aa10.11□□□□□ -0.79
PRPF40A-203ENST00000448428 SMIM30A4D0T7 59 aa10.11□□□□□ -0.79
PRPF40A-203ENST00000448428 ADARB2-AS1A8MUL3 147 aa10.11□□□□□ -0.79
PRPF40A-203ENST00000448428 FGF16O43320 207 aa10.11□□□□□ -0.79
PRPF40A-203ENST00000448428 LANCL1O43813 399 aa10.11□□□□□ -0.79
PRPF40A-203ENST00000448428 RGS11O94810 467 aa10.11□□□□□ -0.79
PRPF40A-203ENST00000448428 SLC2A2P11168 524 aaPredicted RBP10.11□□□□□ -0.79
PRPF40A-203ENST00000448428 NSUN5P1Q3KNT7 163 aa10.11□□□□□ -0.79
PRPF40A-203ENST00000448428 MOGAT2Q3SYC2 334 aa10.11□□□□□ -0.79
PRPF40A-203ENST00000448428 C10orf99Q6UWK7 81 aa10.11□□□□□ -0.79
PRPF40A-203ENST00000448428 Q8N6K4 173 aa10.11□□□□□ -0.79
PRPF40A-203ENST00000448428 OR2T10Q8NGZ9 312 aa10.11□□□□□ -0.79
PRPF40A-203ENST00000448428 ABHD14AQ9BUJ0 271 aa10.11□□□□□ -0.79
PRPF40A-203ENST00000448428 OR51E2Q9H255 320 aa10.11□□□□□ -0.79
PRPF40A-203ENST00000448428 Q9N2K0 584 aa10.11□□□□□ -0.79
PRPF40A-203ENST00000448428 KCNK7Q9Y2U2 307 aa10.11□□□□□ -0.79
PRPF40A-203ENST00000448428 MGAM2Q2M2H8 2515 aa10.1□□□□□ -0.79
PRPF40A-203ENST00000448428 NCBP2LA6PVI3 153 aaKnown RBP10.1□□□□□ -0.79
PRPF40A-203ENST00000448428 TXNL1O43396 289 aa10.1□□□□□ -0.79
PRPF40A-203ENST00000448428 MOSP00540 346 aa10.1□□□□□ -0.79
PRPF40A-203ENST00000448428 SCTP09683 121 aa10.1□□□□□ -0.79
PRPF40A-203ENST00000448428 CD83Q01151 205 aa10.1□□□□□ -0.79
PRPF40A-203ENST00000448428 KCTD21Q4G0X4 260 aa10.1□□□□□ -0.79
PRPF40A-203ENST00000448428 TCTEX1D4Q5JR98 221 aa10.1□□□□□ -0.79
PRPF40A-203ENST00000448428 MOB1BQ7L9L4 216 aa10.1□□□□□ -0.79
PRPF40A-203ENST00000448428 NDUFA11Q86Y39 141 aa10.1□□□□□ -0.79
PRPF40A-203ENST00000448428 CMSS1Q9BQ75 279 aaKnown RBP10.1□□□□□ -0.79
PRPF40A-203ENST00000448428 PLSCR3Q9NRY6 295 aa10.1□□□□□ -0.79
PRPF40A-203ENST00000448428 SSR3Q9UNL2 185 aa10.1□□□□□ -0.79
PRPF40A-203ENST00000448428 LINC01548A6NM66 108 aa10.09□□□□□ -0.79
PRPF40A-203ENST00000448428 RAB27BO00194 218 aa10.09□□□□□ -0.79
PRPF40A-203ENST00000448428 RAB6AP20340 208 aa10.09□□□□□ -0.79
PRPF40A-203ENST00000448428 CEACAM6P40199 344 aa10.09□□□□□ -0.79
PRPF40A-203ENST00000448428 OR3A3P47888 321 aa10.09□□□□□ -0.79
PRPF40A-203ENST00000448428 F2RL1P55085 397 aa10.09□□□□□ -0.79
PRPF40A-203ENST00000448428 NEDD8Q15843 81 aa10.09□□□□□ -0.79
PRPF40A-203ENST00000448428 ZNF833PQ6ZTB9 187 aa10.09□□□□□ -0.79
PRPF40A-203ENST00000448428 TPRA1Q86W33 373 aa10.09□□□□□ -0.79
PRPF40A-203ENST00000448428 Q8N9W7 124 aa10.09□□□□□ -0.79
PRPF40A-203ENST00000448428 OR2AK2Q8NG84 335 aa10.09□□□□□ -0.79
PRPF40A-203ENST00000448428 OR10R2Q8NGX6 335 aa10.09□□□□□ -0.79
PRPF40A-203ENST00000448428 RAB3CQ96E17 227 aa10.09□□□□□ -0.79
PRPF40A-203ENST00000448428 PARP12Q9H0J9 701 aaKnown RBP10.09□□□□□ -0.79
PRPF40A-203ENST00000448428 IFI27L2Q9H2X8 130 aa10.09□□□□□ -0.79
PRPF40A-203ENST00000448428 C12orf4Q9NQ89 552 aa10.09□□□□□ -0.79
PRPF40A-203ENST00000448428 OR1A1Q9P1Q5 309 aa10.09□□□□□ -0.79
PRPF40A-203ENST00000448428 MGAT4AQ9UM21 535 aa10.09□□□□□ -0.79
PRPF40A-203ENST00000448428 PLXNB1O43157 2135 aa10.09□□□□□ -0.79
PRPF40A-203ENST00000448428 SAA2-SAA4A0A096LPE2 208 aa10.08□□□□□ -0.8
PRPF40A-203ENST00000448428 METTL21EPA6NDL7 271 aa10.08□□□□□ -0.8
PRPF40A-203ENST00000448428 NOTOA8MTQ0 251 aa10.08□□□□□ -0.8
PRPF40A-203ENST00000448428 ST8SIA5O15466 376 aa10.08□□□□□ -0.8
PRPF40A-203ENST00000448428 IGHG2P01859 326 aa10.08□□□□□ -0.8
PRPF40A-203ENST00000448428 OPN1MWP04001 364 aa10.08□□□□□ -0.8
PRPF40A-203ENST00000448428 CD3GP09693 182 aa10.08□□□□□ -0.8
PRPF40A-203ENST00000448428 SAA2P0DJI9 122 aaPredicted RBP10.08□□□□□ -0.8
PRPF40A-203ENST00000448428 OPN1MW2P0DN77 364 aa10.08□□□□□ -0.8
PRPF40A-203ENST00000448428 OPN1MW3P0DN78 364 aa10.08□□□□□ -0.8
PRPF40A-203ENST00000448428 GNB3P16520 340 aa10.08□□□□□ -0.8
PRPF40A-203ENST00000448428 GADD45AP24522 165 aa10.08□□□□□ -0.8
PRPF40A-203ENST00000448428 HLA-DRB3P79483 266 aa10.08□□□□□ -0.8
PRPF40A-203ENST00000448428 LSAMPQ13449 338 aa10.08□□□□□ -0.8
PRPF40A-203ENST00000448428 PTX4Q96A99 478 aa10.08□□□□□ -0.8
PRPF40A-203ENST00000448428 RITA1Q96K30 269 aa10.08□□□□□ -0.8
PRPF40A-203ENST00000448428 NOL4LQ96MY1 436 aaPredicted RBP10.08□□□□□ -0.8
PRPF40A-203ENST00000448428 S1PR3Q99500 378 aa10.08□□□□□ -0.8
PRPF40A-203ENST00000448428 NABP2Q9BQ15 211 aa10.08□□□□□ -0.8
PRPF40A-203ENST00000448428 CHCHD6Q9BRQ6 235 aa10.08□□□□□ -0.8
PRPF40A-203ENST00000448428 MRPL20Q9BYC9 149 aaKnown RBP10.08□□□□□ -0.8
PRPF40A-203ENST00000448428 RNF167Q9H6Y7 350 aa10.08□□□□□ -0.8
PRPF40A-203ENST00000448428 SLC23A1Q9UHI7 598 aa10.08□□□□□ -0.8
PRPF40A-203ENST00000448428 A0A075B6Q4 140 aa10.07□□□□□ -0.8
PRPF40A-203ENST00000448428 IGKV1-6A0A0C4DH72 117 aa10.07□□□□□ -0.8
PRPF40A-203ENST00000448428 A0A1W2PRX2 142 aa10.07□□□□□ -0.8
PRPF40A-203ENST00000448428 TCRBV4S1A1TA0A5B7 111 aa10.07□□□□□ -0.8
PRPF40A-203ENST00000448428 TRDCB7Z8K6 153 aa10.07□□□□□ -0.8
PRPF40A-203ENST00000448428 MFNGO00587 321 aa10.07□□□□□ -0.8
PRPF40A-203ENST00000448428 ITGB1BP1O14713 200 aa10.07□□□□□ -0.8
PRPF40A-203ENST00000448428 HSPA12AO43301 675 aa10.07□□□□□ -0.8
PRPF40A-203ENST00000448428 CD36P16671 472 aa10.07□□□□□ -0.8
PRPF40A-203ENST00000448428 ZBTB25P24278 435 aa10.07□□□□□ -0.8
PRPF40A-203ENST00000448428 SDC2P34741 201 aa10.07□□□□□ -0.8
PRPF40A-203ENST00000448428 DEFA6Q01524 100 aa10.07□□□□□ -0.8
PRPF40A-203ENST00000448428 SLC35E3Q7Z769 313 aa10.07□□□□□ -0.8
PRPF40A-203ENST00000448428 ZNF329Q86UD4 541 aa10.07□□□□□ -0.8
PRPF40A-203ENST00000448428 OR8H1Q8NGG4 311 aa10.07□□□□□ -0.8
PRPF40A-203ENST00000448428 R3HDM4Q96D70 268 aa10.07□□□□□ -0.8
PRPF40A-203ENST00000448428 ABHD14BQ96IU4 210 aa10.07□□□□□ -0.8
PRPF40A-203ENST00000448428 KCTD7Q96MP8 289 aa10.07□□□□□ -0.8
PRPF40A-203ENST00000448428 ZNF251Q9BRH9 671 aa10.07□□□□□ -0.8
PRPF40A-203ENST00000448428 AGMATQ9BSE5 352 aa10.07□□□□□ -0.8
PRPF40A-203ENST00000448428 C11orf54Q9H0W9 315 aaPredicted RBP10.07□□□□□ -0.8
PRPF40A-203ENST00000448428 ATG5Q9H1Y0 275 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms