RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 WNT5AP41221 380 aa16.16■□□□□ 0.18
SDCBP-204ENST00000447182 DCAF12Q5T6F0 453 aa16.16■□□□□ 0.18
SDCBP-204ENST00000447182 PEAR1Q5VY43 1037 aaPredicted RBP16.16■□□□□ 0.18
SDCBP-204ENST00000447182 ZNF497Q6ZNH5 498 aa16.16■□□□□ 0.18
SDCBP-204ENST00000447182 CENPVQ7Z7K6 275 aaPredicted RBP16.16■□□□□ 0.18
SDCBP-204ENST00000447182 CT55Q8WUE5 264 aa16.16■□□□□ 0.18
SDCBP-204ENST00000447182 TAF15Q92804 592 aaKnown RBP eCLIP16.16■□□□□ 0.18
SDCBP-204ENST00000447182 KMT2EQ8IZD2 1858 aa16.15■□□□□ 0.18
SDCBP-204ENST00000447182 RHBDL1O75783 438 aa16.15■□□□□ 0.18
SDCBP-204ENST00000447182 DEFA6Q01524 100 aa16.15■□□□□ 0.18
SDCBP-204ENST00000447182 RBKSQ9H477 322 aa16.15■□□□□ 0.18
SDCBP-204ENST00000447182 B4GALT7Q9UBV7 327 aa16.15■□□□□ 0.18
SDCBP-204ENST00000447182 NAT8Q9UHE5 227 aa16.15■□□□□ 0.18
SDCBP-204ENST00000447182 PITPNC1Q9UKF7 332 aa16.15■□□□□ 0.18
SDCBP-204ENST00000447182 NEURL1O76050 574 aa16.15■□□□□ 0.18
SDCBP-204ENST00000447182 CELA3AP09093 270 aa16.15■□□□□ 0.18
SDCBP-204ENST00000447182 SSX3Q99909 188 aa16.15■□□□□ 0.18
SDCBP-204ENST00000447182 ESPL1Q14674 2120 aa16.14■□□□□ 0.17
SDCBP-204ENST00000447182 ZNF737O75373 536 aa16.14■□□□□ 0.17
SDCBP-204ENST00000447182 NDUFS6O75380 124 aaKnown RBP16.14■□□□□ 0.17
SDCBP-204ENST00000447182 GPX4P36969 197 aaPredicted RBP16.14■□□□□ 0.17
SDCBP-204ENST00000447182 PDZD11Q5EBL8 140 aa16.14■□□□□ 0.17
SDCBP-204ENST00000447182 SPANXN5Q5MJ07 72 aa16.14■□□□□ 0.17
SDCBP-204ENST00000447182 C6orf15Q6UXA7 325 aaPredicted RBP16.14■□□□□ 0.17
SDCBP-204ENST00000447182 TMEM14EPQ6UXP3 125 aa16.14■□□□□ 0.17
SDCBP-204ENST00000447182 CYP2G1PQ6ZSU1 146 aa16.14■□□□□ 0.17
SDCBP-204ENST00000447182 PYGO2Q9BRQ0 406 aa16.14■□□□□ 0.17
SDCBP-204ENST00000447182 FABP4P15090 132 aa16.13■□□□□ 0.17
SDCBP-204ENST00000447182 SLC38A11Q08AI6 406 aa16.13■□□□□ 0.17
SDCBP-204ENST00000447182 ZNF600Q6ZNG1 722 aa16.13■□□□□ 0.17
SDCBP-204ENST00000447182 OR10A7Q8NGE5 316 aa16.13■□□□□ 0.17
SDCBP-204ENST00000447182 SRD5A3Q9H8P0 318 aa16.13■□□□□ 0.17
SDCBP-204ENST00000447182 MBNL3Q9NUK0 354 aaKnown RBP16.13■□□□□ 0.17
SDCBP-204ENST00000447182 CHD3Q12873 2000 aaKnown RBP16.13■□□□□ 0.17
SDCBP-204ENST00000447182 PATE3B3GLJ2 98 aa16.13■□□□□ 0.17
SDCBP-204ENST00000447182 CER1O95813 267 aa16.13■□□□□ 0.17
SDCBP-204ENST00000447182 JMJD7P0C870 316 aa16.13■□□□□ 0.17
SDCBP-204ENST00000447182 PGA5P0DJD9 388 aa16.13■□□□□ 0.17
SDCBP-204ENST00000447182 CA6P23280 308 aa16.13■□□□□ 0.17
SDCBP-204ENST00000447182 MEF2BQ02080 365 aaPredicted RBP16.13■□□□□ 0.17
SDCBP-204ENST00000447182 TIPARPQ7Z3E1 657 aaKnown RBP16.13■□□□□ 0.17
SDCBP-204ENST00000447182 Q8IYB0 196 aa16.13■□□□□ 0.17
SDCBP-204ENST00000447182 RPP25LQ8N5L8 163 aaKnown RBP16.13■□□□□ 0.17
SDCBP-204ENST00000447182 LHX4Q969G2 390 aa16.13■□□□□ 0.17
SDCBP-204ENST00000447182 SMIM7Q9BQ49 75 aa16.13■□□□□ 0.17
SDCBP-204ENST00000447182 SLC39A9Q9NUM3 307 aa16.13■□□□□ 0.17
SDCBP-204ENST00000447182 KCNS2Q9ULS6 477 aa16.13■□□□□ 0.17
SDCBP-204ENST00000447182 RBM7Q9Y580 266 aaKnown RBP16.13■□□□□ 0.17
SDCBP-204ENST00000447182 A0A1W2PR80 420 aa16.12■□□□□ 0.17
SDCBP-204ENST00000447182 RNF212BA8MTL3 300 aa16.12■□□□□ 0.17
SDCBP-204ENST00000447182 PFN1P07737 140 aaKnown RBP16.12■□□□□ 0.17
SDCBP-204ENST00000447182 CLN3Q13286 438 aa16.12■□□□□ 0.17
SDCBP-204ENST00000447182 FGFRL1Q8N441 504 aa16.12■□□□□ 0.17
SDCBP-204ENST00000447182 DRAM1Q8N682 238 aa16.12■□□□□ 0.17
SDCBP-204ENST00000447182 HLA-CQ95604 372 aa16.12■□□□□ 0.17
SDCBP-204ENST00000447182 THOC3Q96J01 351 aaKnown RBP16.12■□□□□ 0.17
SDCBP-204ENST00000447182 PACRGQ96M98 296 aaPredicted RBP16.12■□□□□ 0.17
SDCBP-204ENST00000447182 HIST1H2BLQ99880 126 aa16.12■□□□□ 0.17
SDCBP-204ENST00000447182 TRAPPC2LQ9UL33 140 aa16.12■□□□□ 0.17
SDCBP-204ENST00000447182 WIPI2Q9Y4P8 454 aa16.12■□□□□ 0.17
SDCBP-204ENST00000447182 UBE2L5PA0A1B0GUS4 154 aa16.12■□□□□ 0.17
SDCBP-204ENST00000447182 C3orf80F5H4A9 247 aa16.12■□□□□ 0.17
SDCBP-204ENST00000447182 TMEM250H0YL14 139 aa16.12■□□□□ 0.17
SDCBP-204ENST00000447182 WDR1O75083 606 aa16.12■□□□□ 0.17
SDCBP-204ENST00000447182 KBTBD11O94819 623 aa16.12■□□□□ 0.17
SDCBP-204ENST00000447182 OR2H2O95918 312 aa16.12■□□□□ 0.17
SDCBP-204ENST00000447182 ZNF16P17020 682 aaPredicted RBP16.12■□□□□ 0.17
SDCBP-204ENST00000447182 SPINK2P20155 84 aa16.12■□□□□ 0.17
SDCBP-204ENST00000447182 ELLP55199 621 aaPredicted RBP16.12■□□□□ 0.17
SDCBP-204ENST00000447182 ERVK11-1P61568 191 aa16.12■□□□□ 0.17
SDCBP-204ENST00000447182 TMEM241Q24JQ0 296 aa16.12■□□□□ 0.17
SDCBP-204ENST00000447182 C4orf17Q53FE4 359 aa16.12■□□□□ 0.17
SDCBP-204ENST00000447182 NCR3LG1Q68D85 454 aa16.12■□□□□ 0.17
SDCBP-204ENST00000447182 OR1K1Q8NGR3 316 aa16.12■□□□□ 0.17
SDCBP-204ENST00000447182 MAFAQ8NHW3 353 aaPredicted RBP16.12■□□□□ 0.17
SDCBP-204ENST00000447182 TRAV39A0A0B4J263 110 aa16.11■□□□□ 0.17
SDCBP-204ENST00000447182 IGKV1D-33P01593 117 aa16.11■□□□□ 0.17
SDCBP-204ENST00000447182 IGKV1-33P01594 117 aa16.11■□□□□ 0.17
SDCBP-204ENST00000447182 TNFRSF9Q07011 255 aa16.11■□□□□ 0.17
SDCBP-204ENST00000447182 GAMTQ14353 236 aa16.11■□□□□ 0.17
SDCBP-204ENST00000447182 BEND4Q6ZU67 534 aa16.11■□□□□ 0.17
SDCBP-204ENST00000447182 PRR18Q8N4B5 295 aa16.11■□□□□ 0.17
SDCBP-204ENST00000447182 OR4X1Q8NH49 305 aa16.11■□□□□ 0.17
SDCBP-204ENST00000447182 GP6Q9HCN6 339 aa16.11■□□□□ 0.17
SDCBP-204ENST00000447182 HSPB7Q9UBY9 170 aa16.11■□□□□ 0.17
SDCBP-204ENST00000447182 PRSS50Q9UI38 385 aa16.11■□□□□ 0.17
SDCBP-204ENST00000447182 CEACAM6P40199 344 aa16.1■□□□□ 0.17
SDCBP-204ENST00000447182 PKIAP61925 76 aa16.1■□□□□ 0.17
SDCBP-204ENST00000447182 ATP6V1FQ16864 119 aa16.1■□□□□ 0.17
SDCBP-204ENST00000447182 TGIF2LYQ8IUE0 185 aa16.1■□□□□ 0.17
SDCBP-204ENST00000447182 TMEM183AQ8IXX5 376 aa16.1■□□□□ 0.17
SDCBP-204ENST00000447182 OR5R1Q8NH85 324 aa16.1■□□□□ 0.17
SDCBP-204ENST00000447182 SNX22Q96L94 193 aa16.1■□□□□ 0.17
SDCBP-204ENST00000447182 RTL8AQ9BWD3 113 aa16.1■□□□□ 0.17
SDCBP-204ENST00000447182 COL27A1Q8IZC6 1860 aaPredicted RBP16.1■□□□□ 0.17
SDCBP-204ENST00000447182 MED12LQ86YW9 2145 aa16.1■□□□□ 0.17
SDCBP-204ENST00000447182 SIRPB1O00241 398 aa16.1■□□□□ 0.17
SDCBP-204ENST00000447182 TDGF1P13385 188 aa16.1■□□□□ 0.17
SDCBP-204ENST00000447182 MAGEA5P43359 124 aa16.1■□□□□ 0.17
SDCBP-204ENST00000447182 NUFIP2Q7Z417 695 aaKnown RBP16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms