RNA–Protein interactions for RNA: ENST00000447041.6

COL9A1-205, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 4

Gene COL9A1, Length 690 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-205ENST00000447041 NICN1Q9BSH3 213 aa14.23□□□□□ -0.13
COL9A1-205ENST00000447041 MND1Q9BWT6 205 aa14.23□□□□□ -0.13
COL9A1-205ENST00000447041 KMT2CQ8NEZ4 4911 aaKnown RBP14.22□□□□□ -0.13
COL9A1-205ENST00000447041 SAA2-SAA4A0A096LPE2 208 aa14.22□□□□□ -0.13
COL9A1-205ENST00000447041 YPEL1O60688 119 aa14.22□□□□□ -0.13
COL9A1-205ENST00000447041 UBBP0CG47 229 aa14.22□□□□□ -0.13
COL9A1-205ENST00000447041 SAA2P0DJI9 122 aaPredicted RBP14.22□□□□□ -0.13
COL9A1-205ENST00000447041 PSMB8P28062 276 aa14.22□□□□□ -0.13
COL9A1-205ENST00000447041 OR3A3P47888 321 aa14.22□□□□□ -0.13
COL9A1-205ENST00000447041 ACTBP60709 375 aa14.22□□□□□ -0.13
COL9A1-205ENST00000447041 RPS27AP62979 156 aaKnown RBP14.22□□□□□ -0.13
COL9A1-205ENST00000447041 UNC119Q13432 240 aa14.22□□□□□ -0.13
COL9A1-205ENST00000447041 KIR2DS1Q14954 304 aa14.22□□□□□ -0.13
COL9A1-205ENST00000447041 HMGN3Q15651 99 aa14.22□□□□□ -0.13
COL9A1-205ENST00000447041 ZNF833PQ6ZTB9 187 aa14.22□□□□□ -0.13
COL9A1-205ENST00000447041 NEDD4LQ96PU5 975 aa14.22□□□□□ -0.13
COL9A1-205ENST00000447041 YPEL2Q96QA6 119 aa14.22□□□□□ -0.13
COL9A1-205ENST00000447041 B9D2Q9BPU9 175 aa14.22□□□□□ -0.13
COL9A1-205ENST00000447041 FAAP24Q9BTP7 215 aa14.22□□□□□ -0.13
COL9A1-205ENST00000447041 TMEM59Q9BXS4 323 aa14.22□□□□□ -0.13
COL9A1-205ENST00000447041 ZNF580Q9UK33 172 aa14.22□□□□□ -0.13
COL9A1-205ENST00000447041 LSM2Q9Y333 95 aaKnown RBP14.22□□□□□ -0.13
COL9A1-205ENST00000447041 HTR2CP28335 458 aa14.21□□□□□ -0.13
COL9A1-205ENST00000447041 DGCR2P98153 550 aa14.21□□□□□ -0.13
COL9A1-205ENST00000447041 C1orf100Q5SVJ3 147 aa14.21□□□□□ -0.13
COL9A1-205ENST00000447041 GLT8D1Q68CQ7 371 aa14.21□□□□□ -0.13
COL9A1-205ENST00000447041 MS4A15Q8N5U1 240 aa14.21□□□□□ -0.13
COL9A1-205ENST00000447041 OR5M8Q8NGP6 311 aa14.21□□□□□ -0.13
COL9A1-205ENST00000447041 C4orf3Q8WVX3 66 aa14.21□□□□□ -0.13
COL9A1-205ENST00000447041 GALMQ96C23 342 aa14.21□□□□□ -0.13
COL9A1-205ENST00000447041 IFI27L2Q9H2X8 130 aa14.21□□□□□ -0.13
COL9A1-205ENST00000447041 PTGES3LE9PB15 166 aa14.2□□□□□ -0.14
COL9A1-205ENST00000447041 G3V318 75 aa14.2□□□□□ -0.14
COL9A1-205ENST00000447041 ATP6V0E1O15342 81 aa14.2□□□□□ -0.14
COL9A1-205ENST00000447041 ST8SIA5O15466 376 aa14.2□□□□□ -0.14
COL9A1-205ENST00000447041 RGS11O94810 467 aa14.2□□□□□ -0.14
COL9A1-205ENST00000447041 OR5H8P0DN80 308 aa14.2□□□□□ -0.14
COL9A1-205ENST00000447041 FHL3Q13643 280 aa14.2□□□□□ -0.14
COL9A1-205ENST00000447041 RNLSQ5VYX0 342 aa14.2□□□□□ -0.14
COL9A1-205ENST00000447041 SVOPQ8N4V2 548 aa14.2□□□□□ -0.14
COL9A1-205ENST00000447041 OR2AK2Q8NG84 335 aa14.2□□□□□ -0.14
COL9A1-205ENST00000447041 MYOZ3Q8TDC0 251 aa14.2□□□□□ -0.14
COL9A1-205ENST00000447041 IL1F10Q8WWZ1 152 aa14.2□□□□□ -0.14
COL9A1-205ENST00000447041 PHYHIPQ92561 330 aa14.2□□□□□ -0.14
COL9A1-205ENST00000447041 ZNF251Q9BRH9 671 aa14.2□□□□□ -0.14
COL9A1-205ENST00000447041 TM2D1Q9BX74 207 aa14.2□□□□□ -0.14
COL9A1-205ENST00000447041 ANKRD60Q9BZ19 345 aa14.2□□□□□ -0.14
COL9A1-205ENST00000447041 PARP11Q9NR21 331 aa14.2□□□□□ -0.14
COL9A1-205ENST00000447041 WSB1Q9Y6I7 421 aa14.2□□□□□ -0.14
COL9A1-205ENST00000447041 A0A0A6YYD4 124 aa14.19□□□□□ -0.14
COL9A1-205ENST00000447041 IGHV7-81A0A0B4J1V7 117 aa14.19□□□□□ -0.14
COL9A1-205ENST00000447041 TMEM14DPA8MWL7 114 aa14.19□□□□□ -0.14
COL9A1-205ENST00000447041 ANKRD65E5RJM6 399 aa14.19□□□□□ -0.14
COL9A1-205ENST00000447041 NBR2O15453 112 aa14.19□□□□□ -0.14
COL9A1-205ENST00000447041 HLA-DRB1P01911 266 aa14.19□□□□□ -0.14
COL9A1-205ENST00000447041 PPIFP30405 207 aaKnown RBP14.19□□□□□ -0.14
COL9A1-205ENST00000447041 SPHARQ15513 63 aa14.19□□□□□ -0.14
COL9A1-205ENST00000447041 MED22Q15528 200 aa14.19□□□□□ -0.14
COL9A1-205ENST00000447041 HSD17B12Q53GQ0 312 aa14.19□□□□□ -0.14
COL9A1-205ENST00000447041 LY6G6FQ5SQ64 297 aa14.19□□□□□ -0.14
COL9A1-205ENST00000447041 CEACAM19Q7Z692 300 aa14.19□□□□□ -0.14
COL9A1-205ENST00000447041 SETD6Q8TBK2 473 aa14.19□□□□□ -0.14
COL9A1-205ENST00000447041 KLK15Q9H2R5 256 aa14.19□□□□□ -0.14
COL9A1-205ENST00000447041 VCXQ9H320 206 aa14.19□□□□□ -0.14
COL9A1-205ENST00000447041 OR51J1Q9H342 316 aa14.19□□□□□ -0.14
COL9A1-205ENST00000447041 GNB4Q9HAV0 340 aa14.19□□□□□ -0.14
COL9A1-205ENST00000447041 CHMP1AQ9HD42 196 aaPredicted RBP14.19□□□□□ -0.14
COL9A1-205ENST00000447041 ABRACLQ9P1F3 81 aa14.19□□□□□ -0.14
COL9A1-205ENST00000447041 SLC22A1O15245 554 aa14.18□□□□□ -0.14
COL9A1-205ENST00000447041 NAPSAO96009 420 aa14.18□□□□□ -0.14
COL9A1-205ENST00000447041 UCHL1P09936 223 aa14.18□□□□□ -0.14
COL9A1-205ENST00000447041 SRMP19623 302 aa14.18□□□□□ -0.14
COL9A1-205ENST00000447041 QRFPP83859 136 aa14.18□□□□□ -0.14
COL9A1-205ENST00000447041 C5orf64Q2M2E5 130 aa14.18□□□□□ -0.14
COL9A1-205ENST00000447041 C9orf66Q5T8R8 295 aa14.18□□□□□ -0.14
COL9A1-205ENST00000447041 LIPKQ5VXJ0 399 aa14.18□□□□□ -0.14
COL9A1-205ENST00000447041 ZNF880Q6PDB4 577 aa14.18□□□□□ -0.14
COL9A1-205ENST00000447041 FAM131AQ6UXB0 335 aa14.18□□□□□ -0.14
COL9A1-205ENST00000447041 OR11H1Q8NG94 326 aa14.18□□□□□ -0.14
COL9A1-205ENST00000447041 KCNG3Q8TAE7 436 aa14.18□□□□□ -0.14
COL9A1-205ENST00000447041 PRR25Q96S07 402 aa14.18□□□□□ -0.14
COL9A1-205ENST00000447041 PARP12Q9H0J9 701 aaKnown RBP14.18□□□□□ -0.14
COL9A1-205ENST00000447041 SEC14L6B5MCN3 397 aa14.17□□□□□ -0.14
COL9A1-205ENST00000447041 RAMP3O60896 148 aa14.17□□□□□ -0.14
COL9A1-205ENST00000447041 NDUFA3O95167 84 aa14.17□□□□□ -0.14
COL9A1-205ENST00000447041 BLVRBP30043 206 aaPredicted RBP14.17□□□□□ -0.14
COL9A1-205ENST00000447041 NDPQ00604 133 aa14.17□□□□□ -0.14
COL9A1-205ENST00000447041 DCTN2Q13561 401 aaKnown RBP14.17□□□□□ -0.14
COL9A1-205ENST00000447041 KIAA0141Q14154 515 aaPredicted RBP14.17□□□□□ -0.14
COL9A1-205ENST00000447041 IRF3Q14653 427 aa14.17□□□□□ -0.14
COL9A1-205ENST00000447041 RPL39P5Q59GN2 51 aa14.17□□□□□ -0.14
COL9A1-205ENST00000447041 ASPHD1Q5U4P2 390 aa14.17□□□□□ -0.14
COL9A1-205ENST00000447041 FAM71F2Q6NXP2 309 aa14.17□□□□□ -0.14
COL9A1-205ENST00000447041 NPBQ8NG41 125 aa14.17□□□□□ -0.14
COL9A1-205ENST00000447041 TMEM203Q969S6 136 aa14.17□□□□□ -0.14
COL9A1-205ENST00000447041 OR5B12Q96R08 314 aa14.17□□□□□ -0.14
COL9A1-205ENST00000447041 GFI1Q99684 422 aa14.17□□□□□ -0.14
COL9A1-205ENST00000447041 HDHD3Q9BSH5 251 aaPredicted RBP14.17□□□□□ -0.14
COL9A1-205ENST00000447041 LPAR5Q9H1C0 372 aa14.17□□□□□ -0.14
COL9A1-205ENST00000447041 ZMAT5Q9UDW3 170 aaKnown RBP14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms