RNA–Protein interactions for RNA: ENST00000446987.5

DDX56-206, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-206ENST00000446987 IGHG3P01860 377 aa11.19□□□□□ -0.62
DDX56-206ENST00000446987 NBEAP1P0C6P0 100 aa11.19□□□□□ -0.62
DDX56-206ENST00000446987 PLGLB1Q02325 96 aa11.19□□□□□ -0.62
DDX56-206ENST00000446987 BAXQ07812 192 aa11.19□□□□□ -0.62
DDX56-206ENST00000446987 ZNF141Q15928 474 aa11.19□□□□□ -0.62
DDX56-206ENST00000446987 ZNF74Q16587 644 aa11.19□□□□□ -0.62
DDX56-206ENST00000446987 WDR25Q64LD2 544 aaPredicted RBP11.19□□□□□ -0.62
DDX56-206ENST00000446987 C16orf82Q7Z2V1 217 aa11.19□□□□□ -0.62
DDX56-206ENST00000446987 C20orf196Q8IYI0 205 aa11.19□□□□□ -0.62
DDX56-206ENST00000446987 OR2C3Q8N628 320 aa11.19□□□□□ -0.62
DDX56-206ENST00000446987 OR2T10Q8NGZ9 312 aa11.19□□□□□ -0.62
DDX56-206ENST00000446987 KCNG3Q8TAE7 436 aa11.19□□□□□ -0.62
DDX56-206ENST00000446987 MBD3L1Q8WWY6 194 aa11.19□□□□□ -0.62
DDX56-206ENST00000446987 REPIN1Q9BWE0 567 aaKnown RBP11.19□□□□□ -0.62
DDX56-206ENST00000446987 CALHM2Q9HA72 323 aa11.19□□□□□ -0.62
DDX56-206ENST00000446987 RP1L1Q8IWN7 2480 aaPredicted RBP11.19□□□□□ -0.62
DDX56-206ENST00000446987 IGLV3-32A0A0A0MS00 114 aa11.19□□□□□ -0.62
DDX56-206ENST00000446987 J3QKU1 62 aa11.19□□□□□ -0.62
DDX56-206ENST00000446987 PNMTP11086 282 aa11.19□□□□□ -0.62
DDX56-206ENST00000446987 GZMHP20718 246 aa11.19□□□□□ -0.62
DDX56-206ENST00000446987 TFPI2P48307 235 aa11.19□□□□□ -0.62
DDX56-206ENST00000446987 GNB2P62879 340 aa11.19□□□□□ -0.62
DDX56-206ENST00000446987 SRSF1Q07955 248 aaKnown RBP eCLIP11.19□□□□□ -0.624e-7■□□□□ 8.4
DDX56-206ENST00000446987 BATFQ16520 125 aa11.19□□□□□ -0.62
DDX56-206ENST00000446987 ZNF440Q8IYI8 595 aa11.19□□□□□ -0.62
DDX56-206ENST00000446987 CMTM1Q8IZ96 169 aa11.19□□□□□ -0.62
DDX56-206ENST00000446987 GATSQ8NAP1 163 aa11.19□□□□□ -0.62
DDX56-206ENST00000446987 OR2M3Q8NG83 312 aa11.19□□□□□ -0.62
DDX56-206ENST00000446987 OR1L6Q8NGR2 347 aa11.19□□□□□ -0.62
DDX56-206ENST00000446987 OR2V1Q8NHB1 315 aa11.19□□□□□ -0.62
DDX56-206ENST00000446987 SDSLQ96GA7 329 aa11.19□□□□□ -0.62
DDX56-206ENST00000446987 C18orf12Q96KH6 178 aa11.19□□□□□ -0.62
DDX56-206ENST00000446987 VPS25Q9BRG1 176 aa11.19□□□□□ -0.62
DDX56-206ENST00000446987 ABHD6Q9BV23 337 aa11.19□□□□□ -0.62
DDX56-206ENST00000446987 DEFB127Q9H1M4 99 aa11.19□□□□□ -0.62
DDX56-206ENST00000446987 PLEKHF2Q9H8W4 249 aa11.19□□□□□ -0.62
DDX56-206ENST00000446987 EHFQ9NZC4 300 aa11.19□□□□□ -0.62
DDX56-206ENST00000446987 ZNF319Q9P2F9 582 aa11.19□□□□□ -0.62
DDX56-206ENST00000446987 PRSS50Q9UI38 385 aa11.19□□□□□ -0.62
DDX56-206ENST00000446987 CDC42EP3Q9UKI2 254 aa11.19□□□□□ -0.62
DDX56-206ENST00000446987 RPH3ALQ9UNE2 315 aa11.19□□□□□ -0.62
DDX56-206ENST00000446987 MYO18BQ8IUG5 2567 aa11.19□□□□□ -0.62
DDX56-206ENST00000446987 A0A1W2PQD3 144 aa11.18□□□□□ -0.62
DDX56-206ENST00000446987 RNF212BA8MTL3 300 aa11.18□□□□□ -0.62
DDX56-206ENST00000446987 IFNA1P01562 189 aa11.18□□□□□ -0.62
DDX56-206ENST00000446987 ASAH2BP0C7U1 165 aa11.18□□□□□ -0.62
DDX56-206ENST00000446987 RHOGP84095 191 aa11.18□□□□□ -0.62
DDX56-206ENST00000446987 TMEM187Q14656 261 aa11.18□□□□□ -0.62
DDX56-206ENST00000446987 FBLN7Q53RD9 439 aa11.18□□□□□ -0.62
DDX56-206ENST00000446987 KCNIP4Q6PIL6 250 aa11.18□□□□□ -0.62
DDX56-206ENST00000446987 OR10S1Q8NGN2 331 aa11.18□□□□□ -0.62
DDX56-206ENST00000446987 OR2AJ1Q8NGZ0 328 aa11.18□□□□□ -0.62
DDX56-206ENST00000446987 TMEM37Q8WXS4 190 aa11.18□□□□□ -0.62
DDX56-206ENST00000446987 ZNF524Q96C55 264 aa11.18□□□□□ -0.62
DDX56-206ENST00000446987 MRPL27Q9P0M9 148 aaKnown RBP11.18□□□□□ -0.62
DDX56-206ENST00000446987 SPRR3Q9UBC9 169 aa11.18□□□□□ -0.62
DDX56-206ENST00000446987 SLC7A11Q9UPY5 501 aa11.18□□□□□ -0.62
DDX56-206ENST00000446987 ZNF835Q9Y2P0 537 aa11.18□□□□□ -0.62
DDX56-206ENST00000446987 LAMTOR2Q9Y2Q5 125 aa11.18□□□□□ -0.62
DDX56-206ENST00000446987 MRPS16Q9Y3D3 137 aaKnown RBP11.18□□□□□ -0.62
DDX56-206ENST00000446987 USP9XQ93008 2570 aaPredicted RBP11.18□□□□□ -0.62
DDX56-206ENST00000446987 ANKUB1A6NFN9 424 aa11.17□□□□□ -0.62
DDX56-206ENST00000446987 CBY3A6NI87 242 aa11.17□□□□□ -0.62
DDX56-206ENST00000446987 CDS2O95674 445 aa11.17□□□□□ -0.62
DDX56-206ENST00000446987 HPNP05981 417 aa11.17□□□□□ -0.62
DDX56-206ENST00000446987 MDKP21741 143 aaPredicted RBP11.17□□□□□ -0.62
DDX56-206ENST00000446987 GDF1P27539 372 aa11.17□□□□□ -0.62
DDX56-206ENST00000446987 CTRLP40313 264 aa11.17□□□□□ -0.62
DDX56-206ENST00000446987 CSNK2A1P68400 391 aaPredicted RBP11.17□□□□□ -0.62
DDX56-206ENST00000446987 RNF151Q2KHN1 245 aa11.17□□□□□ -0.62
DDX56-206ENST00000446987 BSXQ3C1V8 233 aa11.17□□□□□ -0.62
DDX56-206ENST00000446987 PLAC9Q5JTB6 97 aa11.17□□□□□ -0.62
DDX56-206ENST00000446987 MRGPRGQ86SM5 289 aa11.17□□□□□ -0.62
DDX56-206ENST00000446987 STPG4Q8N801 248 aa11.17□□□□□ -0.62
DDX56-206ENST00000446987 CSNK2A3Q8NEV1 391 aa11.17□□□□□ -0.62
DDX56-206ENST00000446987 OR4C5Q8NGB2 326 aa11.17□□□□□ -0.62
DDX56-206ENST00000446987 OR4D5Q8NGN0 318 aa11.17□□□□□ -0.62
DDX56-206ENST00000446987 ABHD14AQ9BUJ0 271 aa11.17□□□□□ -0.62
DDX56-206ENST00000446987 OR51I2Q9H344 312 aa11.17□□□□□ -0.62
DDX56-206ENST00000446987 G6PC2Q9NQR9 355 aa11.17□□□□□ -0.62
DDX56-206ENST00000446987 KIAA1549Q9HCM3 1950 aa11.17□□□□□ -0.62
DDX56-206ENST00000446987 A6NJY4 79 aa11.17□□□□□ -0.62
DDX56-206ENST00000446987 H3BSH0 61 aa11.17□□□□□ -0.62
DDX56-206ENST00000446987 WISP1O95388 367 aa11.17□□□□□ -0.62
DDX56-206ENST00000446987 WNT5AP41221 380 aa11.17□□□□□ -0.62
DDX56-206ENST00000446987 SNU13P55769 128 aaKnown RBP11.17□□□□□ -0.62
DDX56-206ENST00000446987 TAS2R30P59541 319 aa11.17□□□□□ -0.62
DDX56-206ENST00000446987 RPL15P61313 204 aaKnown RBP11.17□□□□□ -0.62
DDX56-206ENST00000446987 OCIAD2Q56VL3 154 aa11.17□□□□□ -0.62
DDX56-206ENST00000446987 CBLN3Q6UW01 205 aa11.17□□□□□ -0.62
DDX56-206ENST00000446987 GFRALQ6UXV0 394 aa11.17□□□□□ -0.62
DDX56-206ENST00000446987 LSRQ86X29 649 aaPredicted RBP11.17□□□□□ -0.62
DDX56-206ENST00000446987 FAM89BQ8N5H3 189 aa11.17□□□□□ -0.62
DDX56-206ENST00000446987 OR52N5Q8NH56 324 aa11.17□□□□□ -0.62
DDX56-206ENST00000446987 RPUSD4Q96CM3 377 aaKnown RBP11.17□□□□□ -0.62
DDX56-206ENST00000446987 FAM71F1Q96KD3 344 aaPredicted RBP11.17□□□□□ -0.62
DDX56-206ENST00000446987 TSPAN32Q96QS1 320 aa11.17□□□□□ -0.62
DDX56-206ENST00000446987 RNF2Q99496 336 aa11.17□□□□□ -0.62
DDX56-206ENST00000446987 B9D1Q9UPM9 204 aa11.17□□□□□ -0.62
DDX56-206ENST00000446987 RCL1Q9Y2P8 373 aaKnown RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms