RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 HLA-DQA1P01909 254 aa2.88□□□□□ -1.95
HMGB1P48-201ENST00000446155 MAS1P04201 325 aa2.88□□□□□ -1.95
HMGB1P48-201ENST00000446155 TCRBP04435 133 aa2.88□□□□□ -1.95
HMGB1P48-201ENST00000446155 IFNA16P05015 189 aa2.88□□□□□ -1.95
HMGB1P48-201ENST00000446155 SOD3P08294 240 aa2.88□□□□□ -1.95
HMGB1P48-201ENST00000446155 ZNF806P0C7X5 589 aa2.88□□□□□ -1.95
HMGB1P48-201ENST00000446155 LINC00614P0C842 121 aa2.88□□□□□ -1.95
HMGB1P48-201ENST00000446155 SCGB1C2P0DMR2 95 aa2.88□□□□□ -1.95
HMGB1P48-201ENST00000446155 HIST1H1EP10412 219 aaKnown RBP2.88□□□□□ -1.95
HMGB1P48-201ENST00000446155 HSD11B1P28845 292 aa2.88□□□□□ -1.95
HMGB1P48-201ENST00000446155 IMPA1P29218 277 aa2.88□□□□□ -1.95
HMGB1P48-201ENST00000446155 SLCO1A2P46721 670 aa2.88□□□□□ -1.95
HMGB1P48-201ENST00000446155 ERVS71-1P61550 626 aa2.88□□□□□ -1.95
HMGB1P48-201ENST00000446155 CCL7P80098 99 aa2.88□□□□□ -1.95
HMGB1P48-201ENST00000446155 FMODQ06828 376 aa2.88□□□□□ -1.95
HMGB1P48-201ENST00000446155 AESQ08117 197 aa2.88□□□□□ -1.95
HMGB1P48-201ENST00000446155 SKP2Q13309 424 aa2.88□□□□□ -1.95
HMGB1P48-201ENST00000446155 C1DQ13901 141 aaKnown RBP2.88□□□□□ -1.95
HMGB1P48-201ENST00000446155 PAFAH1B3Q15102 231 aaKnown RBP2.88□□□□□ -1.95
HMGB1P48-201ENST00000446155 TMEM176BQ3YBM2 270 aaPredicted RBP2.88□□□□□ -1.95
HMGB1P48-201ENST00000446155 TNFAIP8L2Q6P589 184 aaPredicted RBP2.88□□□□□ -1.95
HMGB1P48-201ENST00000446155 ZNF773Q6PK81 442 aa2.88□□□□□ -1.95
HMGB1P48-201ENST00000446155 FA2HQ7L5A8 372 aa2.88□□□□□ -1.95
HMGB1P48-201ENST00000446155 UBALD2Q8IYN6 164 aa2.88□□□□□ -1.95
HMGB1P48-201ENST00000446155 ORMDL3Q8N138 153 aa2.88□□□□□ -1.95
HMGB1P48-201ENST00000446155 ZNF555Q8NEP9 628 aa2.88□□□□□ -1.95
HMGB1P48-201ENST00000446155 OR1M1Q8NGA1 313 aa2.88□□□□□ -1.95
HMGB1P48-201ENST00000446155 OR5H2Q8NGV7 314 aa2.88□□□□□ -1.95
HMGB1P48-201ENST00000446155 OR11L1Q8NGX0 322 aa2.88□□□□□ -1.95
HMGB1P48-201ENST00000446155 SCGB1C1Q8TD33 95 aa2.88□□□□□ -1.95
HMGB1P48-201ENST00000446155 TAMM41Q96BW9 452 aa2.88□□□□□ -1.95
HMGB1P48-201ENST00000446155 C9orf16Q9BUW7 83 aa2.88□□□□□ -1.95
HMGB1P48-201ENST00000446155 TAS2R5Q9NYW4 299 aa2.88□□□□□ -1.95
HMGB1P48-201ENST00000446155 ZNF706Q9Y5V0 76 aaPredicted RBP2.88□□□□□ -1.95
HMGB1P48-201ENST00000446155 TMEM14AQ9Y6G1 99 aa2.88□□□□□ -1.95
HMGB1P48-201ENST00000446155 EYSQ5T1H1 3165 aa2.88□□□□□ -1.95
HMGB1P48-201ENST00000446155 CLUHO75153 1309 aa2.88□□□□□ -1.95
HMGB1P48-201ENST00000446155 KIAA0100Q14667 2235 aaKnown RBP2.88□□□□□ -1.95
HMGB1P48-201ENST00000446155 PKD1L3Q7Z443 1732 aa2.88□□□□□ -1.95
HMGB1P48-201ENST00000446155 A0A1W2PP64 1363 aa2.87□□□□□ -1.95
HMGB1P48-201ENST00000446155 MIA3Q5JRA6 1907 aa2.87□□□□□ -1.95
HMGB1P48-201ENST00000446155 ARHGAP21Q5T5U3 1957 aa2.87□□□□□ -1.95
HMGB1P48-201ENST00000446155 IGKV1-6A0A0C4DH72 117 aa2.87□□□□□ -1.95
HMGB1P48-201ENST00000446155 MFNGO00587 321 aa2.87□□□□□ -1.95
HMGB1P48-201ENST00000446155 IGKV1-39P01597 117 aa2.87□□□□□ -1.95
HMGB1P48-201ENST00000446155 IGKV1D-39P04432 117 aa2.87□□□□□ -1.95
HMGB1P48-201ENST00000446155 MNAT1P51948 309 aa2.87□□□□□ -1.95
HMGB1P48-201ENST00000446155 CMC4P56277 68 aaPredicted RBP2.87□□□□□ -1.95
HMGB1P48-201ENST00000446155 TCL1AP56279 114 aa2.87□□□□□ -1.95
HMGB1P48-201ENST00000446155 TAS2R43P59537 309 aa2.87□□□□□ -1.95
HMGB1P48-201ENST00000446155 PDK2Q15119 407 aa2.87□□□□□ -1.95
HMGB1P48-201ENST00000446155 UBE2SQ16763 222 aa2.87□□□□□ -1.95
HMGB1P48-201ENST00000446155 AKIRIN2Q53H80 203 aa2.87□□□□□ -1.95
HMGB1P48-201ENST00000446155 CENPWQ5EE01 88 aa2.87□□□□□ -1.95
HMGB1P48-201ENST00000446155 CLVS2Q5SYC1 327 aa2.87□□□□□ -1.95
HMGB1P48-201ENST00000446155 ZNF684Q5T5D7 378 aa2.87□□□□□ -1.95
HMGB1P48-201ENST00000446155 SPOPLQ6IQ16 392 aa2.87□□□□□ -1.95
HMGB1P48-201ENST00000446155 FAM173BQ6P4H8 233 aa2.87□□□□□ -1.95
HMGB1P48-201ENST00000446155 WDR86Q86TI4 376 aa2.87□□□□□ -1.95
HMGB1P48-201ENST00000446155 COMMD7Q86VX2 200 aa2.87□□□□□ -1.95
HMGB1P48-201ENST00000446155 RNF175Q8N4F7 328 aa2.87□□□□□ -1.95
HMGB1P48-201ENST00000446155 DEFB123Q8N688 67 aa2.87□□□□□ -1.95
HMGB1P48-201ENST00000446155 GPR32P1Q8NGA4 272 aa2.87□□□□□ -1.95
HMGB1P48-201ENST00000446155 CIRBP-AS1Q8TBR5 109 aa2.87□□□□□ -1.95
HMGB1P48-201ENST00000446155 PHOSPHO2Q8TCD6 241 aa2.87□□□□□ -1.95
HMGB1P48-201ENST00000446155 C16orf78Q8WTQ4 265 aa2.87□□□□□ -1.95
HMGB1P48-201ENST00000446155 OPTNQ96CV9 577 aa2.87□□□□□ -1.95
HMGB1P48-201ENST00000446155 PRAP1Q96NZ9 151 aa2.87□□□□□ -1.95
HMGB1P48-201ENST00000446155 OLFM3Q96PB7 478 aa2.87□□□□□ -1.95
HMGB1P48-201ENST00000446155 TIPINQ9BVW5 301 aa2.87□□□□□ -1.95
HMGB1P48-201ENST00000446155 ULBP1Q9BZM6 244 aa2.87□□□□□ -1.95
HMGB1P48-201ENST00000446155 OR51B6Q9H340 312 aa2.87□□□□□ -1.95
HMGB1P48-201ENST00000446155 ZNF331Q9NQX6 463 aaPredicted RBP2.87□□□□□ -1.95
HMGB1P48-201ENST00000446155 SLC2A9Q9NRM0 540 aa2.87□□□□□ -1.95
HMGB1P48-201ENST00000446155 NEU3Q9UQ49 428 aa2.87□□□□□ -1.95
HMGB1P48-201ENST00000446155 C14orf166Q9Y224 244 aaKnown RBP2.87□□□□□ -1.95
HMGB1P48-201ENST00000446155 BTRCQ9Y297 605 aa2.87□□□□□ -1.95
HMGB1P48-201ENST00000446155 KIAA1551Q9HCM1 1747 aa2.87□□□□□ -1.95
HMGB1P48-201ENST00000446155 EVC2Q86UK5 1308 aa2.87□□□□□ -1.95
HMGB1P48-201ENST00000446155 N4BP2Q86UW6 1770 aaPredicted RBP2.87□□□□□ -1.95
HMGB1P48-201ENST00000446155 QRICH2Q9H0J4 1663 aa2.86□□□□□ -1.95
HMGB1P48-201ENST00000446155 NCOR1O75376 2440 aa2.86□□□□□ -1.95
HMGB1P48-201ENST00000446155 TMX2-CTNND1H3BSU7 103 aa2.86□□□□□ -1.95
HMGB1P48-201ENST00000446155 KCNK1O00180 336 aa2.86□□□□□ -1.95
HMGB1P48-201ENST00000446155 ZNF207O43670 478 aaKnown RBP2.86□□□□□ -1.95
HMGB1P48-201ENST00000446155 HLA-DRAP01903 254 aa2.86□□□□□ -1.95
HMGB1P48-201ENST00000446155 SEC11BP0C7V7 166 aa2.86□□□□□ -1.95
HMGB1P48-201ENST00000446155 GABRA1P14867 456 aa2.86□□□□□ -1.95
HMGB1P48-201ENST00000446155 NELFEP18615 380 aaKnown RBP2.86□□□□□ -1.95
HMGB1P48-201ENST00000446155 MIPP30301 263 aa2.86□□□□□ -1.95
HMGB1P48-201ENST00000446155 PMELP40967 661 aa2.86□□□□□ -1.95
HMGB1P48-201ENST00000446155 CAPZBP47756 277 aa2.86□□□□□ -1.95
HMGB1P48-201ENST00000446155 OMPP47874 163 aa2.86□□□□□ -1.95
HMGB1P48-201ENST00000446155 CXCL12P48061 93 aa2.86□□□□□ -1.95
HMGB1P48-201ENST00000446155 MP68P56378 58 aa2.86□□□□□ -1.95
HMGB1P48-201ENST00000446155 PFN3P60673 137 aa2.86□□□□□ -1.95
HMGB1P48-201ENST00000446155 VBP1P61758 197 aa2.86□□□□□ -1.95
HMGB1P48-201ENST00000446155 ATP5G2Q06055 141 aa2.86□□□□□ -1.95
HMGB1P48-201ENST00000446155 TSPAN31Q12999 210 aa2.86□□□□□ -1.95
HMGB1P48-201ENST00000446155 TMEM241Q24JQ0 296 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms