RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 IGKV1-39P01597 117 aa11.88□□□□□ -0.51
VPS52-212ENST00000445902 IGKV1D-39P04432 117 aa11.88□□□□□ -0.51
VPS52-212ENST00000445902 ZNF32P17041 273 aa11.88□□□□□ -0.51
VPS52-212ENST00000445902 DRD1P21728 446 aa11.88□□□□□ -0.51
VPS52-212ENST00000445902 MPLP40238 635 aa11.88□□□□□ -0.51
VPS52-212ENST00000445902 FUT6P51993 359 aa11.88□□□□□ -0.51
VPS52-212ENST00000445902 UBE2G2P60604 165 aa11.88□□□□□ -0.51
VPS52-212ENST00000445902 RPL15P61313 204 aaKnown RBP11.88□□□□□ -0.51
VPS52-212ENST00000445902 SLC38A11Q08AI6 406 aa11.88□□□□□ -0.51
VPS52-212ENST00000445902 C20orf204Q6ZNR8 217 aa11.88□□□□□ -0.51
VPS52-212ENST00000445902 TMPRSS7Q7RTY8 843 aa11.88□□□□□ -0.51
VPS52-212ENST00000445902 OR1F12Q8NHA8 337 aa11.88□□□□□ -0.51
VPS52-212ENST00000445902 TMEM54Q969K7 222 aa11.88□□□□□ -0.51
VPS52-212ENST00000445902 MIEN1Q9BRT3 115 aa11.88□□□□□ -0.51
VPS52-212ENST00000445902 PPP1R3CQ9UQK1 317 aa11.88□□□□□ -0.51
VPS52-212ENST00000445902 USF3Q68DE3 2245 aa11.88□□□□□ -0.51
VPS52-212ENST00000445902 FREM2Q5SZK8 3169 aa11.88□□□□□ -0.51
VPS52-212ENST00000445902 LINC00614P0C842 121 aa11.88□□□□□ -0.51
VPS52-212ENST00000445902 C1QTNF9P0C862 333 aa11.88□□□□□ -0.51
VPS52-212ENST00000445902 NPPCP23582 126 aa11.88□□□□□ -0.51
VPS52-212ENST00000445902 CD38P28907 300 aa11.88□□□□□ -0.51
VPS52-212ENST00000445902 C11orf42Q8N5U0 333 aa11.88□□□□□ -0.51
VPS52-212ENST00000445902 CRISPLD2Q9H0B8 497 aa11.88□□□□□ -0.51
VPS52-212ENST00000445902 GPR35Q9HC97 309 aa11.88□□□□□ -0.51
VPS52-212ENST00000445902 GPR27Q9NS67 375 aa11.88□□□□□ -0.51
VPS52-212ENST00000445902 FREM1Q5H8C1 2179 aa11.88□□□□□ -0.51
VPS52-212ENST00000445902 CEP290O15078 2479 aa11.88□□□□□ -0.51
VPS52-212ENST00000445902 MSX1P28360 303 aa11.88□□□□□ -0.51
VPS52-212ENST00000445902 SRP14P37108 136 aaKnown RBP11.88□□□□□ -0.51
VPS52-212ENST00000445902 PPP1CBP62140 327 aa11.88□□□□□ -0.51
VPS52-212ENST00000445902 HSPB9Q9BQS6 159 aa11.88□□□□□ -0.51
VPS52-212ENST00000445902 DNAJC4Q9NNZ3 241 aa11.88□□□□□ -0.51
VPS52-212ENST00000445902 TMEM106BQ9NUM4 274 aa11.88□□□□□ -0.51
VPS52-212ENST00000445902 DOCK7Q96N67 2140 aa11.87□□□□□ -0.51
VPS52-212ENST00000445902 TMEM250H0YL14 139 aa11.87□□□□□ -0.51
VPS52-212ENST00000445902 TYMSP04818 313 aa11.87□□□□□ -0.51
VPS52-212ENST00000445902 RAET1LQ5VY80 246 aa11.87□□□□□ -0.51
VPS52-212ENST00000445902 OR10G9Q8NGN4 311 aa11.87□□□□□ -0.51
VPS52-212ENST00000445902 OR10G7Q8NGN6 311 aa11.87□□□□□ -0.51
VPS52-212ENST00000445902 FGFBP3Q8TAT2 258 aa11.87□□□□□ -0.51
VPS52-212ENST00000445902 PINX1Q96BK5 328 aaKnown RBP11.87□□□□□ -0.51
VPS52-212ENST00000445902 CACNA1DQ01668 2161 aa11.87□□□□□ -0.51
VPS52-212ENST00000445902 A0A1W2PPC4 97 aa11.87□□□□□ -0.51
VPS52-212ENST00000445902 HS3ST1O14792 307 aa11.87□□□□□ -0.51
VPS52-212ENST00000445902 TUSC2O75896 110 aa11.87□□□□□ -0.51
VPS52-212ENST00000445902 CLDN1O95832 211 aa11.87□□□□□ -0.51
VPS52-212ENST00000445902 IGKV1-5P01602 117 aa11.87□□□□□ -0.51
VPS52-212ENST00000445902 IL6RP08887 468 aaPredicted RBP11.87□□□□□ -0.51
VPS52-212ENST00000445902 CD82P27701 267 aa11.87□□□□□ -0.51
VPS52-212ENST00000445902 Q6ZS52 159 aa11.87□□□□□ -0.51
VPS52-212ENST00000445902 CARFQ8N187 725 aa11.87□□□□□ -0.51
VPS52-212ENST00000445902 CFHR5Q9BXR6 569 aa11.87□□□□□ -0.51
VPS52-212ENST00000445902 CRIM1Q9NZV1 1036 aa11.87□□□□□ -0.51
VPS52-212ENST00000445902 PXMP4Q9Y6I8 212 aa11.87□□□□□ -0.51
VPS52-212ENST00000445902 TPTE2P1Q5T6R2 138 aa11.86□□□□□ -0.51
VPS52-212ENST00000445902 ZNF114Q8NC26 417 aa11.86□□□□□ -0.51
VPS52-212ENST00000445902 SGMS2Q8NHU3 365 aa11.86□□□□□ -0.51
VPS52-212ENST00000445902 RDH5Q92781 318 aa11.86□□□□□ -0.51
VPS52-212ENST00000445902 WDYHV1Q96HA8 205 aa11.86□□□□□ -0.51
VPS52-212ENST00000445902 SGCZQ96LD1 299 aa11.86□□□□□ -0.51
VPS52-212ENST00000445902 TMEM204Q9BSN7 226 aa11.86□□□□□ -0.51
VPS52-212ENST00000445902 VAMP8Q9BV40 100 aa11.86□□□□□ -0.51
VPS52-212ENST00000445902 FOXJ2Q9P0K8 574 aa11.86□□□□□ -0.51
VPS52-212ENST00000445902 hCG_38984A0A1B0GV85 526 aa11.86□□□□□ -0.51
VPS52-212ENST00000445902 F2Z2F3 143 aa11.86□□□□□ -0.51
VPS52-212ENST00000445902 TNFSF13O75888 250 aa11.86□□□□□ -0.51
VPS52-212ENST00000445902 NAPSAO96009 420 aa11.86□□□□□ -0.51
VPS52-212ENST00000445902 CCNOP22674 350 aa11.86□□□□□ -0.51
VPS52-212ENST00000445902 GPM6AP51674 278 aa11.86□□□□□ -0.51
VPS52-212ENST00000445902 FAM27BQ5VT28 67 aa11.86□□□□□ -0.51
VPS52-212ENST00000445902 TMEM42Q69YG0 159 aa11.86□□□□□ -0.51
VPS52-212ENST00000445902 OR5P3Q8WZ94 311 aa11.86□□□□□ -0.51
VPS52-212ENST00000445902 NEIL1Q96FI4 390 aaPredicted RBP11.86□□□□□ -0.51
VPS52-212ENST00000445902 ZNF488Q96MN9 340 aa11.86□□□□□ -0.51
VPS52-212ENST00000445902 ZDHHC11Q9H8X9 412 aa11.86□□□□□ -0.51
VPS52-212ENST00000445902 IL36GQ9NZH8 169 aa11.86□□□□□ -0.51
VPS52-212ENST00000445902 OR1A1Q9P1Q5 309 aa11.86□□□□□ -0.51
VPS52-212ENST00000445902 KIAA1549Q9HCM3 1950 aa11.86□□□□□ -0.51
VPS52-212ENST00000445902 C11orf94C9JXX5 98 aa11.85□□□□□ -0.51
VPS52-212ENST00000445902 TNFSF11O14788 317 aa11.85□□□□□ -0.51
VPS52-212ENST00000445902 CBLN1P23435 193 aa11.85□□□□□ -0.51
VPS52-212ENST00000445902 RAB7AP51149 207 aa11.85□□□□□ -0.51
VPS52-212ENST00000445902 TFF3Q07654 80 aa11.85□□□□□ -0.51
VPS52-212ENST00000445902 FFAR4Q5NUL3 377 aa11.85□□□□□ -0.51
VPS52-212ENST00000445902 ZNF501Q96CX3 271 aaPredicted RBP11.85□□□□□ -0.51
VPS52-212ENST00000445902 FAM103A1Q9BTL3 118 aaKnown RBP11.85□□□□□ -0.51
VPS52-212ENST00000445902 KCNS2Q9ULS6 477 aa11.85□□□□□ -0.51
VPS52-212ENST00000445902 TP53TG3Q9ULZ0 132 aa11.85□□□□□ -0.51
VPS52-212ENST00000445902 RBM7Q9Y580 266 aaKnown RBP11.85□□□□□ -0.51
VPS52-212ENST00000445902 NTF4P34130 210 aa11.85□□□□□ -0.51
VPS52-212ENST00000445902 PSG4Q00888 419 aa11.85□□□□□ -0.51
VPS52-212ENST00000445902 MMDQ15546 238 aa11.85□□□□□ -0.51
VPS52-212ENST00000445902 RHBDD2Q6NTF9 364 aa11.85□□□□□ -0.51
VPS52-212ENST00000445902 PCSK4Q6UW60 755 aa11.85□□□□□ -0.51
VPS52-212ENST00000445902 LINC01551Q86U37 167 aa11.85□□□□□ -0.51
VPS52-212ENST00000445902 YLPM1P49750 1951 aaKnown RBP11.85□□□□□ -0.51
VPS52-212ENST00000445902 VPS13AQ96RL7 3174 aa11.85□□□□□ -0.51
VPS52-212ENST00000445902 CTXND1A0A1B0GTU2 59 aa11.85□□□□□ -0.51
VPS52-212ENST00000445902 SERF1AO75920 110 aa11.85□□□□□ -0.51
VPS52-212ENST00000445902 TIAF1O95411 115 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms