RNA–Protein interactions for RNA: ENST00000445676.5

UBE2F-216, Transcript of ubiquitin conjugating enzyme E2 F (putative), human

TSL 3

Gene UBE2F, Length 831 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2F-216	ENST00000445676	ISG20L2	Q9H9L3	353 aa	Known RBP	11.23	□□□□□ -0.61
UBE2F-216	ENST00000445676	PLEKHA3	Q9HB20	300 aa		11.23	□□□□□ -0.61
UBE2F-216	ENST00000445676	RAB9B	Q9NP90	201 aa		11.23	□□□□□ -0.61
UBE2F-216	ENST00000445676	OR2S2	Q9NQN1	319 aa		11.23	□□□□□ -0.61
UBE2F-216	ENST00000445676	RCC2	Q9P258	522 aa	Known RBP	11.23	□□□□□ -0.61
UBE2F-216	ENST00000445676	SAA2-SAA4	A0A096LPE2	208 aa		11.22	□□□□□ -0.61
UBE2F-216	ENST00000445676	SHISA3	A0PJX4	238 aa		11.22	□□□□□ -0.61
UBE2F-216	ENST00000445676		E9PI62	339 aa		11.22	□□□□□ -0.61
UBE2F-216	ENST00000445676	SLC25A17	O43808	307 aa		11.22	□□□□□ -0.61
UBE2F-216	ENST00000445676	TRGV3	P03979	118 aa		11.22	□□□□□ -0.61
UBE2F-216	ENST00000445676	SAA2	P0DJI9	122 aa	Predicted RBP	11.22	□□□□□ -0.61
UBE2F-216	ENST00000445676	SNRPB	P14678	240 aa	Known RBP	11.22	□□□□□ -0.61
UBE2F-216	ENST00000445676	ZP3	P21754	424 aa		11.22	□□□□□ -0.61
UBE2F-216	ENST00000445676	PPP1CC	P36873	323 aa	Known RBP	11.22	□□□□□ -0.61
UBE2F-216	ENST00000445676	SOX2	P48431	317 aa		11.22	□□□□□ -0.61
UBE2F-216	ENST00000445676	TMEM267	Q0VDI3	215 aa	Predicted RBP	11.22	□□□□□ -0.61
UBE2F-216	ENST00000445676	KLF5	Q13887	457 aa	Predicted RBP	11.22	□□□□□ -0.61
UBE2F-216	ENST00000445676	ATP6AP1	Q15904	470 aa		11.22	□□□□□ -0.61
UBE2F-216	ENST00000445676	AKIRIN2	Q53H80	203 aa		11.22	□□□□□ -0.61
UBE2F-216	ENST00000445676	FAM131A	Q6UXB0	335 aa		11.22	□□□□□ -0.61
UBE2F-216	ENST00000445676	GAPT	Q8N292	157 aa		11.22	□□□□□ -0.61
UBE2F-216	ENST00000445676	OR52L2P	Q8NGH6	319 aa		11.22	□□□□□ -0.61
UBE2F-216	ENST00000445676	DDB2	Q92466	427 aa		11.22	□□□□□ -0.61
UBE2F-216	ENST00000445676	TMEM106A	Q96A25	262 aa		11.22	□□□□□ -0.61
UBE2F-216	ENST00000445676	ALG8	Q9BVK2	526 aa		11.22	□□□□□ -0.61
UBE2F-216	ENST00000445676	JAM3	Q9BX67	310 aa		11.22	□□□□□ -0.61
UBE2F-216	ENST00000445676	SLA2	Q9H6Q3	261 aa		11.22	□□□□□ -0.61
UBE2F-216	ENST00000445676	RANGRF	Q9HD47	186 aa	Predicted RBP	11.22	□□□□□ -0.61
UBE2F-216	ENST00000445676	ETAA1	Q9NY74	926 aa		11.22	□□□□□ -0.61
UBE2F-216	ENST00000445676	ADAM30	Q9UKF2	790 aa		11.22	□□□□□ -0.61
UBE2F-216	ENST00000445676	POMP	Q9Y244	141 aa		11.22	□□□□□ -0.61
UBE2F-216	ENST00000445676	GYS2	P54840	703 aa		11.21	□□□□□ -0.61
UBE2F-216	ENST00000445676	SYNJ2BP	P57105	145 aa		11.21	□□□□□ -0.61
UBE2F-216	ENST00000445676	SLC22A6	Q4U2R8	563 aa		11.21	□□□□□ -0.61
UBE2F-216	ENST00000445676	DDI2	Q5TDH0	399 aa		11.21	□□□□□ -0.61
UBE2F-216	ENST00000445676	LCN12	Q6JVE5	192 aa		11.21	□□□□□ -0.61
UBE2F-216	ENST00000445676	TRAT1	Q6PIZ9	186 aa		11.21	□□□□□ -0.61
UBE2F-216	ENST00000445676	LHFPL3	Q86UP9	236 aa		11.21	□□□□□ -0.61
UBE2F-216	ENST00000445676	ZDHHC13	Q8IUH4	622 aa		11.21	□□□□□ -0.61
UBE2F-216	ENST00000445676		Q8N402	240 aa		11.21	□□□□□ -0.61
UBE2F-216	ENST00000445676	LFNG	Q8NES3	379 aa		11.21	□□□□□ -0.61
UBE2F-216	ENST00000445676	RDH12	Q96NR8	316 aa		11.21	□□□□□ -0.61
UBE2F-216	ENST00000445676	TAF9B	Q9HBM6	251 aa		11.21	□□□□□ -0.61
UBE2F-216	ENST00000445676	JPT1	Q9UK76	154 aa		11.21	□□□□□ -0.61
UBE2F-216	ENST00000445676	RNF150	Q9ULK6	438 aa		11.21	□□□□□ -0.61
UBE2F-216	ENST00000445676	ANKRD34B	A5PLL1	514 aa		11.2	□□□□□ -0.62
UBE2F-216	ENST00000445676	CSN3	P07498	182 aa		11.2	□□□□□ -0.62
UBE2F-216	ENST00000445676	RPSA	P08865	295 aa	Known RBP	11.2	□□□□□ -0.62
UBE2F-216	ENST00000445676	ZNF93	P35789	620 aa	Predicted RBP	11.2	□□□□□ -0.62
UBE2F-216	ENST00000445676	PLGLA	Q15195	96 aa		11.2	□□□□□ -0.62
UBE2F-216	ENST00000445676	SYS1	Q8N2H4	156 aa		11.2	□□□□□ -0.62
UBE2F-216	ENST00000445676	LGALS12	Q96DT0	336 aa		11.2	□□□□□ -0.62
UBE2F-216	ENST00000445676	MBNL3	Q9NUK0	354 aa	Known RBP	11.2	□□□□□ -0.62
UBE2F-216	ENST00000445676	EXOG	Q9Y2C4	368 aa	Known RBP	11.2	□□□□□ -0.62
UBE2F-216	ENST00000445676	DNAH6	Q9C0G6	4158 aa		11.19	□□□□□ -0.62
UBE2F-216	ENST00000445676	MCRIP1	C9JLW8	97 aa		11.19	□□□□□ -0.62
UBE2F-216	ENST00000445676	TFAP2A	P05549	437 aa		11.19	□□□□□ -0.62
UBE2F-216	ENST00000445676	GTF2F2	P13984	249 aa		11.19	□□□□□ -0.62
UBE2F-216	ENST00000445676	CD81	P60033	236 aa		11.19	□□□□□ -0.62
UBE2F-216	ENST00000445676	RAB12	Q6IQ22	244 aa		11.19	□□□□□ -0.62
UBE2F-216	ENST00000445676	AMIGO2	Q86SJ2	522 aa		11.19	□□□□□ -0.62
UBE2F-216	ENST00000445676	MRPS24	Q96EL2	167 aa	Known RBP	11.19	□□□□□ -0.62
UBE2F-216	ENST00000445676	CLCC1	Q96S66	551 aa		11.19	□□□□□ -0.62
UBE2F-216	ENST00000445676	WFDC10A	Q9H1F0	79 aa		11.19	□□□□□ -0.62
UBE2F-216	ENST00000445676	IFI27L2	Q9H2X8	130 aa		11.19	□□□□□ -0.62
UBE2F-216	ENST00000445676	SPACA1	Q9HBV2	294 aa		11.19	□□□□□ -0.62
UBE2F-216	ENST00000445676	TMEM138	Q9NPI0	162 aa		11.19	□□□□□ -0.62
UBE2F-216	ENST00000445676	PAK1IP1	Q9NWT1	392 aa	Predicted RBP	11.19	□□□□□ -0.62
UBE2F-216	ENST00000445676	IMPAD1	Q9NX62	359 aa		11.19	□□□□□ -0.62
UBE2F-216	ENST00000445676	SIGLEC8	Q9NYZ4	499 aa		11.19	□□□□□ -0.62
UBE2F-216	ENST00000445676	YPEL1	O60688	119 aa		11.18	□□□□□ -0.62
UBE2F-216	ENST00000445676	SC5D	O75845	299 aa		11.18	□□□□□ -0.62
UBE2F-216	ENST00000445676	FADS2	O95864	444 aa	Known RBP	11.18	□□□□□ -0.62
UBE2F-216	ENST00000445676	CD40LG	P29965	261 aa		11.18	□□□□□ -0.62
UBE2F-216	ENST00000445676	ALDH3A2	P51648	485 aa		11.18	□□□□□ -0.62
UBE2F-216	ENST00000445676	SLC25A30	Q5SVS4	291 aa		11.18	□□□□□ -0.62
UBE2F-216	ENST00000445676	FAM71F2	Q6NXP2	309 aa		11.18	□□□□□ -0.62
UBE2F-216	ENST00000445676	GLDN	Q6ZMI3	551 aa	Predicted RBP	11.18	□□□□□ -0.62
UBE2F-216	ENST00000445676	DEFB125	Q8N687	156 aa		11.18	□□□□□ -0.62
UBE2F-216	ENST00000445676	POC5	Q8NA72	575 aa		11.18	□□□□□ -0.62
UBE2F-216	ENST00000445676	ORAI1	Q96D31	301 aa		11.18	□□□□□ -0.62
UBE2F-216	ENST00000445676	MRPL48	Q96GC5	212 aa	Known RBP	11.18	□□□□□ -0.62
UBE2F-216	ENST00000445676	YPEL2	Q96QA6	119 aa		11.18	□□□□□ -0.62
UBE2F-216	ENST00000445676	S100A13	Q99584	98 aa		11.18	□□□□□ -0.62
UBE2F-216	ENST00000445676	AASS	Q9UDR5	926 aa		11.18	□□□□□ -0.62
UBE2F-216	ENST00000445676	VPS13D	Q5THJ4	4388 aa		11.18	□□□□□ -0.62
UBE2F-216	ENST00000445676	C13orf42	A0A1B0GVH6	325 aa		11.17	□□□□□ -0.62
UBE2F-216	ENST00000445676		H0YJW9	148 aa		11.17	□□□□□ -0.62
UBE2F-216	ENST00000445676	ZNF780A	O75290	641 aa	Predicted RBP	11.17	□□□□□ -0.62
UBE2F-216	ENST00000445676	CA2	P00918	260 aa		11.17	□□□□□ -0.62
UBE2F-216	ENST00000445676	TRBV12-3	P01733	135 aa		11.17	□□□□□ -0.62
UBE2F-216	ENST00000445676	MAS1	P04201	325 aa		11.17	□□□□□ -0.62
UBE2F-216	ENST00000445676	CD7	P09564	240 aa		11.17	□□□□□ -0.62
UBE2F-216	ENST00000445676	CT45A6	P0DMU7	189 aa		11.17	□□□□□ -0.62
UBE2F-216	ENST00000445676	CT45A5	P0DMU8	189 aa		11.17	□□□□□ -0.62
UBE2F-216	ENST00000445676	CT45A7	P0DMV0	189 aa		11.17	□□□□□ -0.62
UBE2F-216	ENST00000445676	FST	P19883	344 aa		11.17	□□□□□ -0.62
UBE2F-216	ENST00000445676	BDKRB2	P30411	391 aa		11.17	□□□□□ -0.62
UBE2F-216	ENST00000445676	MECP2	P51608	486 aa	Known RBP	11.17	□□□□□ -0.62
UBE2F-216	ENST00000445676	GTF2A1	P52655	376 aa	Predicted RBP	11.17	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms