RNA–Protein interactions for RNA: ENST00000444772.3

SKIDA1-201, Transcript of SKI/DACH domain containing 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SKIDA1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKIDA1-201ENST00000444772 CA5BP1Q8WTZ4 195 aa18.37■□□□□ 0.53
SKIDA1-201ENST00000444772 DMRT1Q9Y5R6 373 aa18.37■□□□□ 0.53
SKIDA1-201ENST00000444772 C9orf172C9J069 976 aa18.36■□□□□ 0.53
SKIDA1-201ENST00000444772 ZNF146Q15072 292 aa18.36■□□□□ 0.53
SKIDA1-201ENST00000444772 ZNF726P1Q15940 193 aa18.36■□□□□ 0.53
SKIDA1-201ENST00000444772 TBC1D28Q2M2D7 210 aa18.36■□□□□ 0.53
SKIDA1-201ENST00000444772 FBXW9Q5XUX1 488 aa18.36■□□□□ 0.53
SKIDA1-201ENST00000444772 LCN15Q6UWW0 184 aa18.36■□□□□ 0.53
SKIDA1-201ENST00000444772 ZBTB34Q8NCN2 500 aa18.36■□□□□ 0.53
SKIDA1-201ENST00000444772 CTDSP1Q9GZU7 261 aa18.36■□□□□ 0.53
SKIDA1-201ENST00000444772 PRSS50Q9UI38 385 aa18.36■□□□□ 0.53
SKIDA1-201ENST00000444772 KLF13Q9Y2Y9 288 aaPredicted RBP18.36■□□□□ 0.53
SKIDA1-201ENST00000444772 C19orf67A6NJJ6 358 aa18.36■□□□□ 0.53
SKIDA1-201ENST00000444772 HIST1H2BKO60814 126 aa18.36■□□□□ 0.53
SKIDA1-201ENST00000444772 PDGFBP01127 241 aaPredicted RBP18.36■□□□□ 0.53
SKIDA1-201ENST00000444772 HIST1H2BJP06899 126 aa18.36■□□□□ 0.53
SKIDA1-201ENST00000444772 HIST1H2BOP23527 126 aa18.36■□□□□ 0.53
SKIDA1-201ENST00000444772 HIST1H2BBP33778 126 aa18.36■□□□□ 0.53
SKIDA1-201ENST00000444772 HIST1H2BDP58876 126 aa18.36■□□□□ 0.53
SKIDA1-201ENST00000444772 HIST1H2BCP62807 126 aa18.36■□□□□ 0.53
SKIDA1-201ENST00000444772 HIST2H2BEQ16778 126 aa18.36■□□□□ 0.53
SKIDA1-201ENST00000444772 HIST2H2BFQ5QNW6 126 aaPredicted RBP18.36■□□□□ 0.53
SKIDA1-201ENST00000444772 HAPLN4Q86UW8 402 aa18.36■□□□□ 0.53
SKIDA1-201ENST00000444772 HIST1H2BHQ93079 126 aa18.36■□□□□ 0.53
SKIDA1-201ENST00000444772 HIST1H2BNQ99877 126 aa18.36■□□□□ 0.53
SKIDA1-201ENST00000444772 HIST1H2BMQ99879 126 aa18.36■□□□□ 0.53
SKIDA1-201ENST00000444772 BCL2L14Q9BZR8 327 aa18.36■□□□□ 0.53
SKIDA1-201ENST00000444772 SDF2L1Q9HCN8 221 aa18.36■□□□□ 0.53
SKIDA1-201ENST00000444772 SH2D1BO14796 132 aa18.36■□□□□ 0.53
SKIDA1-201ENST00000444772 MT-CO3P00414 261 aa18.36■□□□□ 0.53
SKIDA1-201ENST00000444772 MRPL49Q13405 166 aaKnown RBP18.36■□□□□ 0.53
SKIDA1-201ENST00000444772 MDP1Q86V88 176 aa18.36■□□□□ 0.53
SKIDA1-201ENST00000444772 FAM210BQ96KR6 192 aa18.36■□□□□ 0.53
SKIDA1-201ENST00000444772 A0A1W2PR80 420 aa18.35■□□□□ 0.53
SKIDA1-201ENST00000444772 SIRPB1O00241 398 aa18.35■□□□□ 0.53
SKIDA1-201ENST00000444772 ZNF16P17020 682 aaPredicted RBP18.35■□□□□ 0.53
SKIDA1-201ENST00000444772 SCCPDHQ8NBX0 429 aa18.35■□□□□ 0.53
SKIDA1-201ENST00000444772 VSIRQ9H7M9 311 aa18.35■□□□□ 0.53
SKIDA1-201ENST00000444772 IFITM10A6NMD0 228 aa18.35■□□□□ 0.53
SKIDA1-201ENST00000444772 KLRC4-KLRK1H3BQV0 150 aa18.35■□□□□ 0.53
SKIDA1-201ENST00000444772 WDR1O75083 606 aa18.35■□□□□ 0.53
SKIDA1-201ENST00000444772 NKX6-1P78426 367 aaPredicted RBP18.35■□□□□ 0.53
SKIDA1-201ENST00000444772 C1orf210Q8IVY1 113 aa18.35■□□□□ 0.53
SKIDA1-201ENST00000444772 PRR18Q8N4B5 295 aa18.35■□□□□ 0.53
SKIDA1-201ENST00000444772 DRAM1Q8N682 238 aa18.35■□□□□ 0.53
SKIDA1-201ENST00000444772 TAF15Q92804 592 aaKnown RBP eCLIP18.35■□□□□ 0.53
SKIDA1-201ENST00000444772 OR51B6Q9H340 312 aa18.35■□□□□ 0.53
SKIDA1-201ENST00000444772 OPN1MWP04001 364 aa18.34■□□□□ 0.53
SKIDA1-201ENST00000444772 PGA5P0DJD9 388 aa18.34■□□□□ 0.53
SKIDA1-201ENST00000444772 OPN1MW2P0DN77 364 aa18.34■□□□□ 0.53
SKIDA1-201ENST00000444772 OPN1MW3P0DN78 364 aa18.34■□□□□ 0.53
SKIDA1-201ENST00000444772 CEACAM6P40199 344 aa18.34■□□□□ 0.53
SKIDA1-201ENST00000444772 SPANXN5Q5MJ07 72 aa18.34■□□□□ 0.53
SKIDA1-201ENST00000444772 TMEM164Q5U3C3 297 aa18.34■□□□□ 0.53
SKIDA1-201ENST00000444772 CENPVQ7Z7K6 275 aaPredicted RBP18.34■□□□□ 0.53
SKIDA1-201ENST00000444772 FGFRL1Q8N441 504 aa18.34■□□□□ 0.53
SKIDA1-201ENST00000444772 TMEM105Q8N8V8 129 aa18.34■□□□□ 0.53
SKIDA1-201ENST00000444772 OR4C12Q96R67 309 aa18.34■□□□□ 0.53
SKIDA1-201ENST00000444772 PLA2G3Q9NZ20 509 aa18.34■□□□□ 0.53
SKIDA1-201ENST00000444772 ZMAT5Q9UDW3 170 aaKnown RBP18.34■□□□□ 0.53
SKIDA1-201ENST00000444772 MAP1LC3B2A6NCE7 125 aa18.34■□□□□ 0.53
SKIDA1-201ENST00000444772 SP1P08047 785 aa18.34■□□□□ 0.53
SKIDA1-201ENST00000444772 TMEM14EPQ6UXP3 125 aa18.34■□□□□ 0.53
SKIDA1-201ENST00000444772 MAP1LC3BQ9GZQ8 125 aa18.34■□□□□ 0.53
SKIDA1-201ENST00000444772 ZNF407Q9C0G0 2248 aa18.33■□□□□ 0.53
SKIDA1-201ENST00000444772 TRBV24-1A0A075B6N3 115 aa18.33■□□□□ 0.53
SKIDA1-201ENST00000444772 TRAV20A0A0B4J274 112 aa18.33■□□□□ 0.53
SKIDA1-201ENST00000444772 PPP1R2P9O14990 202 aa18.33■□□□□ 0.53
SKIDA1-201ENST00000444772 NDUFS6O75380 124 aaKnown RBP18.33■□□□□ 0.53
SKIDA1-201ENST00000444772 TRGC2P03986 189 aa18.33■□□□□ 0.53
SKIDA1-201ENST00000444772 MEOX1P50221 254 aa18.33■□□□□ 0.53
SKIDA1-201ENST00000444772 SLC38A11Q08AI6 406 aa18.33■□□□□ 0.53
SKIDA1-201ENST00000444772 MSMO1Q15800 293 aa18.33■□□□□ 0.53
SKIDA1-201ENST00000444772 ATP6V1FQ16864 119 aa18.33■□□□□ 0.53
SKIDA1-201ENST00000444772 LINC00696Q6ZRV3 163 aa18.33■□□□□ 0.53
SKIDA1-201ENST00000444772 EDARADDQ8WWZ3 215 aa18.33■□□□□ 0.53
SKIDA1-201ENST00000444772 AGMATQ9BSE5 352 aa18.33■□□□□ 0.53
SKIDA1-201ENST00000444772 NXPH2O95156 264 aa18.33■□□□□ 0.52
SKIDA1-201ENST00000444772 SLC10A1Q14973 349 aa18.33■□□□□ 0.52
SKIDA1-201ENST00000444772 GABRA6Q16445 453 aa18.33■□□□□ 0.52
SKIDA1-201ENST00000444772 FIP1L1Q6UN15 594 aaKnown RBP18.33■□□□□ 0.52
SKIDA1-201ENST00000444772 WDR86Q86TI4 376 aa18.33■□□□□ 0.52
SKIDA1-201ENST00000444772 C12orf49Q9H741 205 aa18.33■□□□□ 0.52
SKIDA1-201ENST00000444772 KCNIP1Q9NZI2 227 aa18.33■□□□□ 0.52
SKIDA1-201ENST00000444772 TRAV39A0A0B4J263 110 aa18.32■□□□□ 0.52
SKIDA1-201ENST00000444772 SPATA46Q5T0L3 261 aa18.32■□□□□ 0.52
SKIDA1-201ENST00000444772 ZNF645Q8N7E2 425 aa18.32■□□□□ 0.52
SKIDA1-201ENST00000444772 FOXJ2Q9P0K8 574 aa18.32■□□□□ 0.52
SKIDA1-201ENST00000444772 HSPB7Q9UBY9 170 aa18.32■□□□□ 0.52
SKIDA1-201ENST00000444772 ARHGAP21Q5T5U3 1957 aa18.32■□□□□ 0.52
SKIDA1-201ENST00000444772 TNFRSF9Q07011 255 aa18.32■□□□□ 0.52
SKIDA1-201ENST00000444772 SLC39A9Q9NUM3 307 aa18.32■□□□□ 0.52
SKIDA1-201ENST00000444772 CEBPZOSA8MTT3 80 aa18.31■□□□□ 0.52
SKIDA1-201ENST00000444772 SPINK2P20155 84 aa18.31■□□□□ 0.52
SKIDA1-201ENST00000444772 FGF8P55075 233 aaPredicted RBP18.31■□□□□ 0.52
SKIDA1-201ENST00000444772 C3AR1Q16581 482 aa18.31■□□□□ 0.52
SKIDA1-201ENST00000444772 PYY3Q5JQD4 70 aa18.31■□□□□ 0.52
SKIDA1-201ENST00000444772 FAM209BQ5JX69 171 aa18.31■□□□□ 0.52
SKIDA1-201ENST00000444772 DNLZQ5SXM8 178 aa18.31■□□□□ 0.52
SKIDA1-201ENST00000444772 SSX7Q7RTT5 188 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms