RNA–Protein interactions for RNA: ENST00000443711.2

USP40-206, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 2 BASIC

Gene USP40, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-206ENST00000443711 ANKRD20A5PA0PJZ0 165 aa12.85□□□□□ -0.35
USP40-206ENST00000443711 NPFFO15130 113 aa12.85□□□□□ -0.35
USP40-206ENST00000443711 CD3DP04234 171 aa12.85□□□□□ -0.35
USP40-206ENST00000443711 ARG1P05089 322 aa12.85□□□□□ -0.35
USP40-206ENST00000443711 SRP14P37108 136 aaKnown RBP12.85□□□□□ -0.35
USP40-206ENST00000443711 RFX2P48378 723 aa12.85□□□□□ -0.35
USP40-206ENST00000443711 INPP1P49441 399 aa12.85□□□□□ -0.35
USP40-206ENST00000443711 GNG10P50151 68 aa12.85□□□□□ -0.35
USP40-206ENST00000443711 LGALS4P56470 323 aa12.85□□□□□ -0.35
USP40-206ENST00000443711 AP3S2P59780 193 aa12.85□□□□□ -0.35
USP40-206ENST00000443711 DYRK1AQ13627 763 aa12.85□□□□□ -0.35
USP40-206ENST00000443711 MIDNQ504T8 468 aa12.85□□□□□ -0.35
USP40-206ENST00000443711 RNASE10Q5GAN6 216 aaKnown RBP12.85□□□□□ -0.35
USP40-206ENST00000443711 TRIQKQ629K1 86 aa12.85□□□□□ -0.35
USP40-206ENST00000443711 ZNF626Q68DY1 528 aa12.85□□□□□ -0.35
USP40-206ENST00000443711 STEAP1BQ6NZ63 245 aa12.85□□□□□ -0.35
USP40-206ENST00000443711 OVCH2Q7RTZ1 564 aa12.85□□□□□ -0.35
USP40-206ENST00000443711 H1FOOQ8IZA3 346 aaPredicted RBP12.85□□□□□ -0.35
USP40-206ENST00000443711 LINC00311Q8N616 119 aa12.85□□□□□ -0.35
USP40-206ENST00000443711 ZNF439Q8NDP4 499 aa12.85□□□□□ -0.35
USP40-206ENST00000443711 BEND2Q8NDZ0 799 aa12.85□□□□□ -0.35
USP40-206ENST00000443711 OR2AK2Q8NG84 335 aa12.85□□□□□ -0.35
USP40-206ENST00000443711 TRIM63Q969Q1 353 aa12.85□□□□□ -0.35
USP40-206ENST00000443711 ODF3BA8MYP8 253 aa12.84□□□□□ -0.35
USP40-206ENST00000443711 M0QYG6 137 aa12.84□□□□□ -0.35
USP40-206ENST00000443711 ITGB1BP1O14713 200 aa12.84□□□□□ -0.35
USP40-206ENST00000443711 RAB3DO95716 219 aa12.84□□□□□ -0.35
USP40-206ENST00000443711 IGLV1-47P01700 117 aa12.84□□□□□ -0.35
USP40-206ENST00000443711 CD74P04233 296 aa12.84□□□□□ -0.35
USP40-206ENST00000443711 IFNA6P05013 189 aa12.84□□□□□ -0.35
USP40-206ENST00000443711 AKAIN1P0CW23 69 aa12.84□□□□□ -0.35
USP40-206ENST00000443711 BAK1Q16611 211 aa12.84□□□□□ -0.35
USP40-206ENST00000443711 HLA-DRB5Q30154 266 aa12.84□□□□□ -0.35
USP40-206ENST00000443711 CT45A1Q5HYN5 189 aa12.84□□□□□ -0.35
USP40-206ENST00000443711 DHRS11Q6UWP2 260 aa12.84□□□□□ -0.35
USP40-206ENST00000443711 SLC25A48Q6ZT89 311 aaKnown RBP12.84□□□□□ -0.35
USP40-206ENST00000443711 IL17RELQ6ZVW7 336 aa12.84□□□□□ -0.35
USP40-206ENST00000443711 Q71RC1 249 aaPredicted RBP12.84□□□□□ -0.35
USP40-206ENST00000443711 TOMM5Q8N4H5 51 aa12.84□□□□□ -0.35
USP40-206ENST00000443711 CT45A3Q8NHU0 189 aa12.84□□□□□ -0.35
USP40-206ENST00000443711 GIMAP1Q8WWP7 306 aa12.84□□□□□ -0.35
USP40-206ENST00000443711 CREB3L1Q96BA8 519 aa12.84□□□□□ -0.35
USP40-206ENST00000443711 TSC22D3Q99576 134 aa12.84□□□□□ -0.35
USP40-206ENST00000443711 CCDC32Q9BV29 185 aa12.84□□□□□ -0.35
USP40-206ENST00000443711 BEX2Q9BXY8 128 aa12.84□□□□□ -0.35
USP40-206ENST00000443711 C11orf54Q9H0W9 315 aaPredicted RBP12.84□□□□□ -0.35
USP40-206ENST00000443711 MMP28Q9H239 520 aa12.84□□□□□ -0.35
USP40-206ENST00000443711 TBL2Q9Y4P3 447 aaKnown RBP12.84□□□□□ -0.35
USP40-206ENST00000443711 AMMECR1Q9Y4X0 333 aaPredicted RBP12.84□□□□□ -0.35
USP40-206ENST00000443711 NAV3Q8IVL0 2385 aa12.83□□□□□ -0.36
USP40-206ENST00000443711 A0A1W2PPE3 182 aa12.83□□□□□ -0.36
USP40-206ENST00000443711 SLC31A2O15432 143 aa12.83□□□□□ -0.36
USP40-206ENST00000443711 NFYAP23511 347 aaPredicted RBP12.83□□□□□ -0.36
USP40-206ENST00000443711 HTR1DP28221 377 aa12.83□□□□□ -0.36
USP40-206ENST00000443711 FCGR2CP31995 323 aa12.83□□□□□ -0.36
USP40-206ENST00000443711 RAB7AP51149 207 aa12.83□□□□□ -0.36
USP40-206ENST00000443711 ZNF134P52741 427 aa12.83□□□□□ -0.36
USP40-206ENST00000443711 TSPAN5P62079 268 aa12.83□□□□□ -0.36
USP40-206ENST00000443711 MEF2DQ14814 521 aa12.83□□□□□ -0.36
USP40-206ENST00000443711 VAX1Q5SQQ9 334 aa12.83□□□□□ -0.36
USP40-206ENST00000443711 MINOS1Q5TGZ0 78 aa12.83□□□□□ -0.36
USP40-206ENST00000443711 RUSC1-AS1Q66K80 236 aa12.83□□□□□ -0.36
USP40-206ENST00000443711 ZNF57Q68EA5 555 aaPredicted RBP12.83□□□□□ -0.36
USP40-206ENST00000443711 BRD3OSQ6XYD6 125 aa12.83□□□□□ -0.36
USP40-206ENST00000443711 TMEM17Q86X19 198 aa12.83□□□□□ -0.36
USP40-206ENST00000443711 OR10X1Q8NGY0 326 aa12.83□□□□□ -0.36
USP40-206ENST00000443711 OR6F1Q8NGZ6 308 aa12.83□□□□□ -0.36
USP40-206ENST00000443711 FAM216AQ8WUB2 273 aa12.83□□□□□ -0.36
USP40-206ENST00000443711 ABHD14AQ9BUJ0 271 aa12.83□□□□□ -0.36
USP40-206ENST00000443711 MS4A7Q9GZW8 240 aaPredicted RBP12.83□□□□□ -0.36
USP40-206ENST00000443711 PARP12Q9H0J9 701 aaKnown RBP12.83□□□□□ -0.36
USP40-206ENST00000443711 GHITMQ9H3K2 345 aa12.83□□□□□ -0.36
USP40-206ENST00000443711 CDC42EP3Q9UKI2 254 aa12.83□□□□□ -0.36
USP40-206ENST00000443711 OR2W1Q9Y3N9 320 aa12.83□□□□□ -0.36
USP40-206ENST00000443711 MINOS1-NBL1R4GNA1 71 aa12.83□□□□□ -0.36
USP40-206ENST00000443711 BUB1B-PAK6H3BSN5 160 aa12.82□□□□□ -0.36
USP40-206ENST00000443711 TUSC2O75896 110 aa12.82□□□□□ -0.36
USP40-206ENST00000443711 IL7P13232 177 aa12.82□□□□□ -0.36
USP40-206ENST00000443711 IL3RAP26951 378 aa12.82□□□□□ -0.36
USP40-206ENST00000443711 SAA4P35542 130 aa12.82□□□□□ -0.36
USP40-206ENST00000443711 FAUP35544 74 aaKnown RBP12.82□□□□□ -0.36
USP40-206ENST00000443711 CEACAM3P40198 252 aa12.82□□□□□ -0.36
USP40-206ENST00000443711 KLF9Q13886 244 aaPredicted RBP12.82□□□□□ -0.36
USP40-206ENST00000443711 PIP4P2Q8N4L2 257 aa12.82□□□□□ -0.36
USP40-206ENST00000443711 OR4P4Q8NGL7 312 aa12.82□□□□□ -0.36
USP40-206ENST00000443711 DEDD2Q8WXF8 326 aa12.82□□□□□ -0.36
USP40-206ENST00000443711 TINAGL1Q9GZM7 467 aaPredicted RBP12.82□□□□□ -0.36
USP40-206ENST00000443711 ZNRD1Q9P1U0 126 aa12.82□□□□□ -0.36
USP40-206ENST00000443711 DPM3Q9P2X0 92 aa12.82□□□□□ -0.36
USP40-206ENST00000443711 RBM7Q9Y580 266 aaKnown RBP12.82□□□□□ -0.36
USP40-206ENST00000443711 LEUTXA8MZ59 168 aa12.81□□□□□ -0.36
USP40-206ENST00000443711 DISC1C4P0D8 188 aa12.81□□□□□ -0.36
USP40-206ENST00000443711 J3QRK9 145 aa12.81□□□□□ -0.36
USP40-206ENST00000443711 ST8SIA5O15466 376 aa12.81□□□□□ -0.36
USP40-206ENST00000443711 OR8U9P0C7N5 309 aa12.81□□□□□ -0.36
USP40-206ENST00000443711 EPHA1P21709 976 aa12.81□□□□□ -0.36
USP40-206ENST00000443711 AADACP22760 399 aa12.81□□□□□ -0.36
USP40-206ENST00000443711 LUMP51884 338 aaPredicted RBP12.81□□□□□ -0.36
USP40-206ENST00000443711 HERV-K104P61576 105 aa12.81□□□□□ -0.36
USP40-206ENST00000443711 C9orf139Q6ZV77 190 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms