RNA–Protein interactions for RNA: ENST00000442265.2

IRF3-204, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-204ENST00000442265 TPRKBQ9Y3C4 175 aa13.02□□□□□ -0.33
IRF3-204ENST00000442265 TRBV6-6A0A0A6YYG2 114 aa13.01□□□□□ -0.33
IRF3-204ENST00000442265 RGS11O94810 467 aa13.01□□□□□ -0.33
IRF3-204ENST00000442265 BPNT1O95861 308 aa13.01□□□□□ -0.33
IRF3-204ENST00000442265 ELANEP08246 267 aa13.01□□□□□ -0.33
IRF3-204ENST00000442265 SOX6P35712 828 aa13.01□□□□□ -0.33
IRF3-204ENST00000442265 PPP1CCP36873 323 aaKnown RBP13.01□□□□□ -0.33
IRF3-204ENST00000442265 TRAM1Q15629 374 aa13.01□□□□□ -0.33
IRF3-204ENST00000442265 LIPKQ5VXJ0 399 aa13.01□□□□□ -0.33
IRF3-204ENST00000442265 TMEM91Q6ZNR0 172 aa13.01□□□□□ -0.33
IRF3-204ENST00000442265 ZNF833PQ6ZTB9 187 aa13.01□□□□□ -0.33
IRF3-204ENST00000442265 C18orf65Q6ZTR6 163 aa13.01□□□□□ -0.33
IRF3-204ENST00000442265 C6orf201Q7Z4U5 140 aa13.01□□□□□ -0.33
IRF3-204ENST00000442265 ZNF695Q8IW36 515 aa13.01□□□□□ -0.33
IRF3-204ENST00000442265 FAM89BQ8N5H3 189 aa13.01□□□□□ -0.33
IRF3-204ENST00000442265 UFD1Q92890 307 aa13.01□□□□□ -0.33
IRF3-204ENST00000442265 FAAP24Q9BTP7 215 aa13.01□□□□□ -0.33
IRF3-204ENST00000442265 ANKRD60Q9BZ19 345 aa13.01□□□□□ -0.33
IRF3-204ENST00000442265 RRP9O43818 475 aaKnown RBP13□□□□□ -0.33
IRF3-204ENST00000442265 IGHG4P01861 327 aa13□□□□□ -0.33
IRF3-204ENST00000442265 PSMA1P25786 263 aaKnown RBP13□□□□□ -0.33
IRF3-204ENST00000442265 CDX1P47902 265 aaPredicted RBP13□□□□□ -0.33
IRF3-204ENST00000442265 KRTAP10-11P60412 298 aa13□□□□□ -0.33
IRF3-204ENST00000442265 NKAPLQ5M9Q1 402 aa13□□□□□ -0.33
IRF3-204ENST00000442265 FAM71F2Q6NXP2 309 aa13□□□□□ -0.33
IRF3-204ENST00000442265 C8orf86Q6ZUL3 223 aa13□□□□□ -0.33
IRF3-204ENST00000442265 C5orf24Q7Z6I8 188 aa13□□□□□ -0.33
IRF3-204ENST00000442265 SVOPQ8N4V2 548 aa13□□□□□ -0.33
IRF3-204ENST00000442265 GFI1Q99684 422 aa13□□□□□ -0.33
IRF3-204ENST00000442265 NABP2Q9BQ15 211 aa13□□□□□ -0.33
IRF3-204ENST00000442265 HSPB9Q9BQS6 159 aa13□□□□□ -0.33
IRF3-204ENST00000442265 MCRIP2Q9BUT9 160 aaKnown RBP13□□□□□ -0.33
IRF3-204ENST00000442265 RIMS4Q9H426 269 aaPredicted RBP13□□□□□ -0.33
IRF3-204ENST00000442265 A0A0A6YYD4 124 aa12.99□□□□□ -0.33
IRF3-204ENST00000442265 FOXI3A8MTJ6 420 aaPredicted RBP12.99□□□□□ -0.33
IRF3-204ENST00000442265 K7EIL1 84 aa12.99□□□□□ -0.33
IRF3-204ENST00000442265 SLC17A2O00624 439 aa12.99□□□□□ -0.33
IRF3-204ENST00000442265 ITGB1BP1O14713 200 aa12.99□□□□□ -0.33
IRF3-204ENST00000442265 RGS10O43665 173 aa12.99□□□□□ -0.33
IRF3-204ENST00000442265 CPEP16870 476 aa12.99□□□□□ -0.33
IRF3-204ENST00000442265 CRHBPP24387 322 aa12.99□□□□□ -0.33
IRF3-204ENST00000442265 MLLT11Q13015 90 aaPredicted RBP12.99□□□□□ -0.33
IRF3-204ENST00000442265 MOB1BQ7L9L4 216 aa12.99□□□□□ -0.33
IRF3-204ENST00000442265 PRSS48Q7RTY5 328 aa12.99□□□□□ -0.33
IRF3-204ENST00000442265 KLHL30-AS1Q8NEE0 82 aa12.99□□□□□ -0.33
IRF3-204ENST00000442265 NICN1Q9BSH3 213 aa12.99□□□□□ -0.33
IRF3-204ENST00000442265 LPAR5Q9H1C0 372 aa12.99□□□□□ -0.33
IRF3-204ENST00000442265 IFI27L2Q9H2X8 130 aa12.99□□□□□ -0.33
IRF3-204ENST00000442265 GHITMQ9H3K2 345 aa12.99□□□□□ -0.33
IRF3-204ENST00000442265 ABRACLQ9P1F3 81 aa12.99□□□□□ -0.33
IRF3-204ENST00000442265 HSF4Q9ULV5 492 aa12.99□□□□□ -0.33
IRF3-204ENST00000442265 DNAH9Q9NYC9 4486 aa12.99□□□□□ -0.33
IRF3-204ENST00000442265 NUDT19A8MXV4 375 aa12.98□□□□□ -0.33
IRF3-204ENST00000442265 ARL6IP5O75915 188 aa12.98□□□□□ -0.33
IRF3-204ENST00000442265 HLA-DRB1P01911 266 aa12.98□□□□□ -0.33
IRF3-204ENST00000442265 RPLP1P05386 114 aaKnown RBP12.98□□□□□ -0.33
IRF3-204ENST00000442265 PSMB8P28062 276 aa12.98□□□□□ -0.33
IRF3-204ENST00000442265 BLVRBP30043 206 aaPredicted RBP12.98□□□□□ -0.33
IRF3-204ENST00000442265 ACTBP60709 375 aa12.98□□□□□ -0.33
IRF3-204ENST00000442265 KIR2DS1Q14954 304 aa12.98□□□□□ -0.33
IRF3-204ENST00000442265 CXorf66Q5JRM2 361 aaPredicted RBP12.98□□□□□ -0.33
IRF3-204ENST00000442265 NPBQ8NG41 125 aa12.98□□□□□ -0.33
IRF3-204ENST00000442265 OR2AK2Q8NG84 335 aa12.98□□□□□ -0.33
IRF3-204ENST00000442265 MYOZ3Q8TDC0 251 aa12.98□□□□□ -0.33
IRF3-204ENST00000442265 TMEM203Q969S6 136 aa12.98□□□□□ -0.33
IRF3-204ENST00000442265 RAX2Q96IS3 184 aa12.98□□□□□ -0.33
IRF3-204ENST00000442265 ZNF251Q9BRH9 671 aa12.98□□□□□ -0.33
IRF3-204ENST00000442265 MRPL20Q9BYC9 149 aaKnown RBP12.98□□□□□ -0.33
IRF3-204ENST00000442265 PLEKHJ1Q9NW61 149 aa12.98□□□□□ -0.33
IRF3-204ENST00000442265 STEAP1Q9UHE8 339 aa12.98□□□□□ -0.33
IRF3-204ENST00000442265 SAA2-SAA4A0A096LPE2 208 aa12.97□□□□□ -0.33
IRF3-204ENST00000442265 CCL24O00175 119 aa12.97□□□□□ -0.33
IRF3-204ENST00000442265 SAA2P0DJI9 122 aaPredicted RBP12.97□□□□□ -0.33
IRF3-204ENST00000442265 OR5H8P0DN80 308 aa12.97□□□□□ -0.33
IRF3-204ENST00000442265 ARSBP15848 533 aa12.97□□□□□ -0.33
IRF3-204ENST00000442265 PPIFP30405 207 aaKnown RBP12.97□□□□□ -0.33
IRF3-204ENST00000442265 OR3A3P47888 321 aa12.97□□□□□ -0.33
IRF3-204ENST00000442265 MMDQ15546 238 aa12.97□□□□□ -0.33
IRF3-204ENST00000442265 RBMXL1Q96E39 390 aaKnown RBP12.97□□□□□ -0.33
IRF3-204ENST00000442265 RITA1Q96K30 269 aa12.97□□□□□ -0.33
IRF3-204ENST00000442265 AGMATQ9BSE5 352 aa12.97□□□□□ -0.33
IRF3-204ENST00000442265 URM1Q9BTM9 101 aaKnown RBP12.97□□□□□ -0.33
IRF3-204ENST00000442265 KCNK15Q9H427 330 aa12.97□□□□□ -0.33
IRF3-204ENST00000442265 PIPOXQ9P0Z9 390 aa12.97□□□□□ -0.33
IRF3-204ENST00000442265 SLC23A1Q9UHI7 598 aa12.97□□□□□ -0.33
IRF3-204ENST00000442265 ZNF107Q9UII5 783 aaPredicted RBP12.97□□□□□ -0.33
IRF3-204ENST00000442265 MGAT4AQ9UM21 535 aa12.97□□□□□ -0.33
IRF3-204ENST00000442265 RAB29O14966 203 aa12.96□□□□□ -0.33
IRF3-204ENST00000442265 SOCS1O15524 211 aa12.96□□□□□ -0.33
IRF3-204ENST00000442265 NDUFA3O95167 84 aa12.96□□□□□ -0.33
IRF3-204ENST00000442265 VDAC1P21796 283 aa12.96□□□□□ -0.33
IRF3-204ENST00000442265 RANBP1P43487 201 aa12.96□□□□□ -0.33
IRF3-204ENST00000442265 TMEM50BP56557 158 aa12.96□□□□□ -0.33
IRF3-204ENST00000442265 RPS25P62851 125 aaKnown RBP12.96□□□□□ -0.33
IRF3-204ENST00000442265 OR8U1Q8NH10 309 aa12.96□□□□□ -0.33
IRF3-204ENST00000442265 DPF1Q92782 380 aa12.96□□□□□ -0.33
IRF3-204ENST00000442265 KCTD7Q96MP8 289 aa12.96□□□□□ -0.33
IRF3-204ENST00000442265 MGLLQ99685 303 aa12.96□□□□□ -0.33
IRF3-204ENST00000442265 ZMAT5Q9UDW3 170 aaKnown RBP12.96□□□□□ -0.33
IRF3-204ENST00000442265 WI2-2373I1.2A0A1W2PRP0 233 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms