RNA–Protein interactions for RNA: ENST00000439886.5

SMPD4-209, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,371 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-209ENST00000439886 FBLN7Q53RD9 439 aa10.06□□□□□ -0.8
SMPD4-209ENST00000439886 GBGT1Q8N5D6 347 aa10.06□□□□□ -0.8
SMPD4-209ENST00000439886 OXGR1Q96P68 337 aa10.06□□□□□ -0.8
SMPD4-209ENST00000439886 WDR1O75083 606 aa10.05□□□□□ -0.8
SMPD4-209ENST00000439886 IFI6P09912 130 aa10.05□□□□□ -0.8
SMPD4-209ENST00000439886 MDH2P40926 338 aaKnown RBP10.05□□□□□ -0.8
SMPD4-209ENST00000439886 KRTDAPP60985 99 aa10.05□□□□□ -0.8
SMPD4-209ENST00000439886 BAXQ07812 192 aa10.05□□□□□ -0.8
SMPD4-209ENST00000439886 ZP4Q12836 540 aa10.05□□□□□ -0.8
SMPD4-209ENST00000439886 KRTCAP3Q53RY4 240 aa10.05□□□□□ -0.8
SMPD4-209ENST00000439886 KCNIP4Q6PIL6 250 aa10.05□□□□□ -0.8
SMPD4-209ENST00000439886 UNQ5815/PRO19632Q6UWF5 114 aa10.05□□□□□ -0.8
SMPD4-209ENST00000439886 BAGE3Q86Y29 109 aa10.05□□□□□ -0.8
SMPD4-209ENST00000439886 BAGE2Q86Y30 109 aa10.05□□□□□ -0.8
SMPD4-209ENST00000439886 H1FOOQ8IZA3 346 aaPredicted RBP10.05□□□□□ -0.8
SMPD4-209ENST00000439886 MRPL30Q8TCC3 161 aaKnown RBP10.05□□□□□ -0.8
SMPD4-209ENST00000439886 TXN2Q99757 166 aa10.05□□□□□ -0.8
SMPD4-209ENST00000439886 FGF21Q9NSA1 209 aa10.05□□□□□ -0.8
SMPD4-209ENST00000439886 R4GN57 208 aa10.05□□□□□ -0.8
SMPD4-209ENST00000439886 PDCD6O75340 191 aa10.05□□□□□ -0.8
SMPD4-209ENST00000439886 VDAC1P21796 283 aa10.05□□□□□ -0.8
SMPD4-209ENST00000439886 TNFRSF4P43489 277 aa10.05□□□□□ -0.8
SMPD4-209ENST00000439886 ARF1P84077 181 aaKnown RBP10.05□□□□□ -0.8
SMPD4-209ENST00000439886 IL24Q13007 206 aa10.05□□□□□ -0.8
SMPD4-209ENST00000439886 ENDOGQ14249 297 aaKnown RBP10.05□□□□□ -0.8
SMPD4-209ENST00000439886 TCF23Q7RTU1 214 aa10.05□□□□□ -0.8
SMPD4-209ENST00000439886 ZNF709Q8N972 641 aa10.05□□□□□ -0.8
SMPD4-209ENST00000439886 MIEN1Q9BRT3 115 aa10.05□□□□□ -0.8
SMPD4-209ENST00000439886 MTCH2Q9Y6C9 303 aa10.05□□□□□ -0.8
SMPD4-209ENST00000439886 IGKV1D-13A0A0B4J2D9 117 aa10.05□□□□□ -0.8
SMPD4-209ENST00000439886 PGPEP1LA6NFU8 196 aa10.05□□□□□ -0.8
SMPD4-209ENST00000439886 PAGE4O60829 102 aa10.05□□□□□ -0.8
SMPD4-209ENST00000439886 TUSC2O75896 110 aa10.05□□□□□ -0.8
SMPD4-209ENST00000439886 IGKV1-13P0DP09 117 aa10.05□□□□□ -0.8
SMPD4-209ENST00000439886 PSG2P11465 335 aa10.05□□□□□ -0.8
SMPD4-209ENST00000439886 CNN1P51911 297 aaKnown RBP10.05□□□□□ -0.8
SMPD4-209ENST00000439886 MRPL13Q9BYD1 178 aaKnown RBP10.05□□□□□ -0.8
SMPD4-209ENST00000439886 DEFB126Q9BYW3 111 aa10.05□□□□□ -0.8
SMPD4-209ENST00000439886 ERRFI1Q9UJM3 462 aaPredicted RBP10.05□□□□□ -0.8
SMPD4-209ENST00000439886 A0A1B0GV72 72 aa10.04□□□□□ -0.8
SMPD4-209ENST00000439886 DHHO43323 396 aa10.04□□□□□ -0.8
SMPD4-209ENST00000439886 CYC1P08574 325 aa10.04□□□□□ -0.8
SMPD4-209ENST00000439886 TDGF1P13385 188 aa10.04□□□□□ -0.8
SMPD4-209ENST00000439886 GABRG2P18507 467 aa10.04□□□□□ -0.8
SMPD4-209ENST00000439886 SMIM21Q3B7S5 101 aa10.04□□□□□ -0.8
SMPD4-209ENST00000439886 PHYHD1Q5SRE7 291 aa10.04□□□□□ -0.8
SMPD4-209ENST00000439886 SLC25A47Q6Q0C1 308 aa10.04□□□□□ -0.8
SMPD4-209ENST00000439886 ZNF611Q8N823 705 aa10.04□□□□□ -0.8
SMPD4-209ENST00000439886 OR10V1Q8NGI7 309 aa10.04□□□□□ -0.8
SMPD4-209ENST00000439886 RNASEH2CQ8TDP1 164 aaKnown RBP10.04□□□□□ -0.8
SMPD4-209ENST00000439886 BTF3L4Q96K17 158 aa10.04□□□□□ -0.8
SMPD4-209ENST00000439886 TM2D1Q9BX74 207 aa10.04□□□□□ -0.8
SMPD4-209ENST00000439886 ZDHHC11Q9H8X9 412 aa10.04□□□□□ -0.8
SMPD4-209ENST00000439886 PLSCR4Q9NRQ2 329 aa10.04□□□□□ -0.8
SMPD4-209ENST00000439886 IGKV1-27A0A075B6S5 117 aa10.04□□□□□ -0.8
SMPD4-209ENST00000439886 ZNF732B4DXR9 585 aa10.04□□□□□ -0.8
SMPD4-209ENST00000439886 GYPAP02724 150 aa10.04□□□□□ -0.8
SMPD4-209ENST00000439886 NBEAP1P0C6P0 100 aa10.04□□□□□ -0.8
SMPD4-209ENST00000439886 CCL2P13500 99 aa10.04□□□□□ -0.8
SMPD4-209ENST00000439886 OR10J1P30954 320 aa10.04□□□□□ -0.8
SMPD4-209ENST00000439886 HIST1H3AP68431 136 aa10.04□□□□□ -0.8
SMPD4-209ENST00000439886 STPG4Q8N801 248 aa10.04□□□□□ -0.8
SMPD4-209ENST00000439886 ORAOV1Q8WV07 137 aa10.04□□□□□ -0.8
SMPD4-209ENST00000439886 PARLQ9H300 379 aa10.04□□□□□ -0.8
SMPD4-209ENST00000439886 TRBV24-1A0A075B6N3 115 aa10.03□□□□□ -0.8
SMPD4-209ENST00000439886 IGKV1-12A0A0C4DH73 117 aa10.03□□□□□ -0.8
SMPD4-209ENST00000439886 A0A1B0GW64 132 aa10.03□□□□□ -0.8
SMPD4-209ENST00000439886 RAB29O14966 203 aa10.03□□□□□ -0.8
SMPD4-209ENST00000439886 IGKV1D-12P01611 117 aa10.03□□□□□ -0.8
SMPD4-209ENST00000439886 HBG1P69891 147 aa10.03□□□□□ -0.8
SMPD4-209ENST00000439886 HBG2P69892 147 aa10.03□□□□□ -0.8
SMPD4-209ENST00000439886 MEF2BQ02080 365 aaPredicted RBP10.03□□□□□ -0.8
SMPD4-209ENST00000439886 ODF1Q14990 250 aa10.03□□□□□ -0.8
SMPD4-209ENST00000439886 MRGPRGQ86SM5 289 aa10.03□□□□□ -0.8
SMPD4-209ENST00000439886 ZDHHC23Q8IYP9 409 aa10.03□□□□□ -0.8
SMPD4-209ENST00000439886 GPR146Q96CH1 333 aa10.03□□□□□ -0.8
SMPD4-209ENST00000439886 ZNF48Q96MX3 618 aaPredicted RBP10.03□□□□□ -0.8
SMPD4-209ENST00000439886 IMMP2LQ96T52 175 aa10.03□□□□□ -0.8
SMPD4-209ENST00000439886 RYDENQ9NUL5 291 aaKnown RBP10.03□□□□□ -0.8
SMPD4-209ENST00000439886 CISD1Q9NZ45 108 aaKnown RBP10.03□□□□□ -0.8
SMPD4-209ENST00000439886 LMO1P25800 156 aa10.03□□□□□ -0.8
SMPD4-209ENST00000439886 RPL23P62829 140 aaKnown RBP10.03□□□□□ -0.8
SMPD4-209ENST00000439886 EIF3IQ13347 325 aaKnown RBP10.03□□□□□ -0.8
SMPD4-209ENST00000439886 SAMD13Q5VXD3 122 aa10.03□□□□□ -0.8
SMPD4-209ENST00000439886 FAM131CQ96AQ9 280 aa10.03□□□□□ -0.8
SMPD4-209ENST00000439886 OR4C12Q96R67 309 aa10.03□□□□□ -0.8
SMPD4-209ENST00000439886 CTDSP1Q9GZU7 261 aa10.03□□□□□ -0.8
SMPD4-209ENST00000439886 PNRC2Q9NPJ4 139 aaKnown RBP10.03□□□□□ -0.8
SMPD4-209ENST00000439886 IL36RNQ9UBH0 155 aa10.03□□□□□ -0.8
SMPD4-209ENST00000439886 CFAP54Q96N23 3096 aa10.03□□□□□ -0.8
SMPD4-209ENST00000439886 CHD9Q3L8U1 2897 aa10.03□□□□□ -0.8
SMPD4-209ENST00000439886 THBS3P49746 956 aa10.03□□□□□ -0.8
SMPD4-209ENST00000439886 DUSP3P51452 185 aaPredicted RBP10.03□□□□□ -0.8
SMPD4-209ENST00000439886 SELENOVP59797 346 aa10.03□□□□□ -0.8
SMPD4-209ENST00000439886 VAMP8Q9BV40 100 aa10.03□□□□□ -0.8
SMPD4-209ENST00000439886 ANGPTL4Q9BY76 406 aa10.03□□□□□ -0.8
SMPD4-209ENST00000439886 A0A0G2JRQ6 117 aa10.02□□□□□ -0.81
SMPD4-209ENST00000439886 C1QTNF9BB2RNN3 333 aa10.02□□□□□ -0.81
SMPD4-209ENST00000439886 J3KRW8 73 aa10.02□□□□□ -0.81
SMPD4-209ENST00000439886 ACOT6Q3I5F7 207 aaPredicted RBP10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 141.8 ms