RNA–Protein interactions for RNA: ENST00000439775.1

SNRPD3-204, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

TSL 3

Gene SNRPD3, Length 640 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-204ENST00000439775 PPP1CCP36873 323 aaKnown RBP12.78□□□□□ -0.36
SNRPD3-204ENST00000439775 AQP4P55087 323 aa12.78□□□□□ -0.36
SNRPD3-204ENST00000439775 KRTAP10-11P60412 298 aa12.78□□□□□ -0.36
SNRPD3-204ENST00000439775 QRFPP83859 136 aa12.78□□□□□ -0.36
SNRPD3-204ENST00000439775 CXorf66Q5JRM2 361 aaPredicted RBP12.78□□□□□ -0.36
SNRPD3-204ENST00000439775 OR10K2Q6IF99 312 aa12.78□□□□□ -0.36
SNRPD3-204ENST00000439775 C6orf201Q7Z4U5 140 aa12.78□□□□□ -0.36
SNRPD3-204ENST00000439775 CEACAM19Q7Z692 300 aa12.78□□□□□ -0.36
SNRPD3-204ENST00000439775 OR6M1Q8NGM8 313 aa12.78□□□□□ -0.36
SNRPD3-204ENST00000439775 UFD1Q92890 307 aa12.78□□□□□ -0.36
SNRPD3-204ENST00000439775 NKX1-2Q9UD57 310 aaPredicted RBP12.78□□□□□ -0.36
SNRPD3-204ENST00000439775 NAPSAO96009 420 aa12.77□□□□□ -0.37
SNRPD3-204ENST00000439775 IGHG4P01861 327 aa12.77□□□□□ -0.37
SNRPD3-204ENST00000439775 RPLP1P05386 114 aaKnown RBP12.77□□□□□ -0.37
SNRPD3-204ENST00000439775 OR5H8P0DN80 308 aa12.77□□□□□ -0.37
SNRPD3-204ENST00000439775 VDAC1P21796 283 aa12.77□□□□□ -0.37
SNRPD3-204ENST00000439775 CDX1P47902 265 aaPredicted RBP12.77□□□□□ -0.37
SNRPD3-204ENST00000439775 MMDQ15546 238 aa12.77□□□□□ -0.37
SNRPD3-204ENST00000439775 LIPKQ5VXJ0 399 aa12.77□□□□□ -0.37
SNRPD3-204ENST00000439775 FAM71F2Q6NXP2 309 aa12.77□□□□□ -0.37
SNRPD3-204ENST00000439775 ZNF880Q6PDB4 577 aa12.77□□□□□ -0.37
SNRPD3-204ENST00000439775 ZNF833PQ6ZTB9 187 aa12.77□□□□□ -0.37
SNRPD3-204ENST00000439775 MOB1BQ7L9L4 216 aa12.77□□□□□ -0.37
SNRPD3-204ENST00000439775 SVOPQ8N4V2 548 aa12.77□□□□□ -0.37
SNRPD3-204ENST00000439775 OR2AK2Q8NG84 335 aa12.77□□□□□ -0.37
SNRPD3-204ENST00000439775 NABP2Q9BQ15 211 aa12.77□□□□□ -0.37
SNRPD3-204ENST00000439775 NICN1Q9BSH3 213 aa12.77□□□□□ -0.37
SNRPD3-204ENST00000439775 FAAP24Q9BTP7 215 aa12.77□□□□□ -0.37
SNRPD3-204ENST00000439775 MRPL20Q9BYC9 149 aaKnown RBP12.77□□□□□ -0.37
SNRPD3-204ENST00000439775 DUSP21Q9H596 190 aa12.77□□□□□ -0.37
SNRPD3-204ENST00000439775 ABRACLQ9P1F3 81 aa12.77□□□□□ -0.37
SNRPD3-204ENST00000439775 TPRKBQ9Y3C4 175 aa12.77□□□□□ -0.37
SNRPD3-204ENST00000439775 SAA2-SAA4A0A096LPE2 208 aa12.76□□□□□ -0.37
SNRPD3-204ENST00000439775 SAA2P0DJI9 122 aaPredicted RBP12.76□□□□□ -0.37
SNRPD3-204ENST00000439775 HOXD3P31249 432 aaPredicted RBP12.76□□□□□ -0.37
SNRPD3-204ENST00000439775 TPBGQ13641 420 aa12.76□□□□□ -0.37
SNRPD3-204ENST00000439775 TRAM1Q15629 374 aa12.76□□□□□ -0.37
SNRPD3-204ENST00000439775 OR8U1Q8NH10 309 aa12.76□□□□□ -0.37
SNRPD3-204ENST00000439775 NRG4Q8WWG1 115 aa12.76□□□□□ -0.37
SNRPD3-204ENST00000439775 RAX2Q96IS3 184 aa12.76□□□□□ -0.37
SNRPD3-204ENST00000439775 CHCHD6Q9BRQ6 235 aa12.76□□□□□ -0.37
SNRPD3-204ENST00000439775 ANKRD60Q9BZ19 345 aa12.76□□□□□ -0.37
SNRPD3-204ENST00000439775 IFI27L2Q9H2X8 130 aa12.76□□□□□ -0.37
SNRPD3-204ENST00000439775 KCNK15Q9H427 330 aa12.76□□□□□ -0.37
SNRPD3-204ENST00000439775 ISYNA1Q9NPH2 558 aa12.76□□□□□ -0.37
SNRPD3-204ENST00000439775 ZNF107Q9UII5 783 aaPredicted RBP12.76□□□□□ -0.37
SNRPD3-204ENST00000439775 TRBV6-6A0A0A6YYG2 114 aa12.75□□□□□ -0.37
SNRPD3-204ENST00000439775 CCL24O00175 119 aa12.75□□□□□ -0.37
SNRPD3-204ENST00000439775 HLA-DRB1P01911 266 aa12.75□□□□□ -0.37
SNRPD3-204ENST00000439775 SLC2A2P11168 524 aaPredicted RBP12.75□□□□□ -0.37
SNRPD3-204ENST00000439775 MYF6P23409 242 aa12.75□□□□□ -0.37
SNRPD3-204ENST00000439775 PSMA1P25786 263 aaKnown RBP12.75□□□□□ -0.37
SNRPD3-204ENST00000439775 PSMB8P28062 276 aa12.75□□□□□ -0.37
SNRPD3-204ENST00000439775 BLVRBP30043 206 aaPredicted RBP12.75□□□□□ -0.37
SNRPD3-204ENST00000439775 C5orf24Q7Z6I8 188 aa12.75□□□□□ -0.37
SNRPD3-204ENST00000439775 TMEM203Q969S6 136 aa12.75□□□□□ -0.37
SNRPD3-204ENST00000439775 RBMXL1Q96E39 390 aaKnown RBP12.75□□□□□ -0.37
SNRPD3-204ENST00000439775 URM1Q9BTM9 101 aaKnown RBP12.75□□□□□ -0.37
SNRPD3-204ENST00000439775 LPAR5Q9H1C0 372 aa12.75□□□□□ -0.37
SNRPD3-204ENST00000439775 RIMS4Q9H426 269 aaPredicted RBP12.75□□□□□ -0.37
SNRPD3-204ENST00000439775 PLEKHJ1Q9NW61 149 aa12.75□□□□□ -0.37
SNRPD3-204ENST00000439775 STEAP1Q9UHE8 339 aa12.75□□□□□ -0.37
SNRPD3-204ENST00000439775 A0A0A6YYD4 124 aa12.74□□□□□ -0.37
SNRPD3-204ENST00000439775 WI2-2373I1.2A0A1W2PRP0 233 aa12.74□□□□□ -0.37
SNRPD3-204ENST00000439775 SLC17A2O00624 439 aa12.74□□□□□ -0.37
SNRPD3-204ENST00000439775 RGS10O43665 173 aa12.74□□□□□ -0.37
SNRPD3-204ENST00000439775 ARL6IP5O75915 188 aa12.74□□□□□ -0.37
SNRPD3-204ENST00000439775 ARSBP15848 533 aa12.74□□□□□ -0.37
SNRPD3-204ENST00000439775 OR3A3P47888 321 aa12.74□□□□□ -0.37
SNRPD3-204ENST00000439775 ACTBP60709 375 aa12.74□□□□□ -0.37
SNRPD3-204ENST00000439775 MLLT11Q13015 90 aaPredicted RBP12.74□□□□□ -0.37
SNRPD3-204ENST00000439775 KIR2DS1Q14954 304 aa12.74□□□□□ -0.37
SNRPD3-204ENST00000439775 TMEM91Q6ZNR0 172 aa12.74□□□□□ -0.37
SNRPD3-204ENST00000439775 LCNL1Q6ZST4 164 aa12.74□□□□□ -0.37
SNRPD3-204ENST00000439775 FAM89BQ8N5H3 189 aa12.74□□□□□ -0.37
SNRPD3-204ENST00000439775 MYOZ3Q8TDC0 251 aa12.74□□□□□ -0.37
SNRPD3-204ENST00000439775 C4orf3Q8WVX3 66 aa12.74□□□□□ -0.37
SNRPD3-204ENST00000439775 IL1F10Q8WWZ1 152 aa12.74□□□□□ -0.37
SNRPD3-204ENST00000439775 KCTD7Q96MP8 289 aa12.74□□□□□ -0.37
SNRPD3-204ENST00000439775 GFI1Q99684 422 aa12.74□□□□□ -0.37
SNRPD3-204ENST00000439775 CHMP1AQ9HD42 196 aaPredicted RBP12.74□□□□□ -0.37
SNRPD3-204ENST00000439775 PIPOXQ9P0Z9 390 aa12.74□□□□□ -0.37
SNRPD3-204ENST00000439775 ZMAT5Q9UDW3 170 aaKnown RBP12.74□□□□□ -0.37
SNRPD3-204ENST00000439775 ITGB1BP1O14713 200 aa12.73□□□□□ -0.37
SNRPD3-204ENST00000439775 RAB29O14966 203 aa12.73□□□□□ -0.37
SNRPD3-204ENST00000439775 NBR2O15453 112 aa12.73□□□□□ -0.37
SNRPD3-204ENST00000439775 HSMCR30P0CW71 290 aa12.73□□□□□ -0.37
SNRPD3-204ENST00000439775 CPEP16870 476 aa12.73□□□□□ -0.37
SNRPD3-204ENST00000439775 RPS25P62851 125 aaKnown RBP12.73□□□□□ -0.37
SNRPD3-204ENST00000439775 PRSS48Q7RTY5 328 aa12.73□□□□□ -0.37
SNRPD3-204ENST00000439775 NPBQ8NG41 125 aa12.73□□□□□ -0.37
SNRPD3-204ENST00000439775 DUX3Q96PT4 197 aa12.73□□□□□ -0.37
SNRPD3-204ENST00000439775 ZNF251Q9BRH9 671 aa12.73□□□□□ -0.37
SNRPD3-204ENST00000439775 GHITMQ9H3K2 345 aa12.73□□□□□ -0.37
SNRPD3-204ENST00000439775 PLGRKTQ9HBL7 147 aa12.73□□□□□ -0.37
SNRPD3-204ENST00000439775 SLC23A1Q9UHI7 598 aa12.73□□□□□ -0.37
SNRPD3-204ENST00000439775 HSF4Q9ULV5 492 aa12.73□□□□□ -0.37
SNRPD3-204ENST00000439775 MGAT4AQ9UM21 535 aa12.73□□□□□ -0.37
SNRPD3-204ENST00000439775 FOXI3A8MTJ6 420 aaPredicted RBP12.72□□□□□ -0.37
SNRPD3-204ENST00000439775 ST8SIA5O15466 376 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms