RNA–Protein interactions for RNA: ENST00000439518.5

NCKIPSD-206, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 1 (best)

Gene NCKIPSD, Length 1,214 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-206ENST00000439518 CFHR3Q02985 330 aa15.94■□□□□ 0.14
NCKIPSD-206ENST00000439518 FOXE3Q13461 319 aa15.94■□□□□ 0.14
NCKIPSD-206ENST00000439518 HMGN3Q15651 99 aa15.94■□□□□ 0.14
NCKIPSD-206ENST00000439518 LIPKQ5VXJ0 399 aa15.94■□□□□ 0.14
NCKIPSD-206ENST00000439518 GALMQ96C23 342 aa15.94■□□□□ 0.14
NCKIPSD-206ENST00000439518 NICN1Q9BSH3 213 aa15.94■□□□□ 0.14
NCKIPSD-206ENST00000439518 KCNK15Q9H427 330 aa15.94■□□□□ 0.14
NCKIPSD-206ENST00000439518 TPRKBQ9Y3C4 175 aa15.94■□□□□ 0.14
NCKIPSD-206ENST00000439518 RGS11O94810 467 aa15.93■□□□□ 0.14
NCKIPSD-206ENST00000439518 BPNT1O95861 308 aa15.93■□□□□ 0.14
NCKIPSD-206ENST00000439518 IGF1P05019 195 aa15.93■□□□□ 0.14
NCKIPSD-206ENST00000439518 RPLP1P05386 114 aaKnown RBP15.93■□□□□ 0.14
NCKIPSD-206ENST00000439518 SOX6P35712 828 aa15.93■□□□□ 0.14
NCKIPSD-206ENST00000439518 TPBGQ13641 420 aa15.93■□□□□ 0.14
NCKIPSD-206ENST00000439518 ZNF880Q6PDB4 577 aa15.93■□□□□ 0.14
NCKIPSD-206ENST00000439518 TMEM91Q6ZNR0 172 aa15.93■□□□□ 0.14
NCKIPSD-206ENST00000439518 OR6M1Q8NGM8 313 aa15.93■□□□□ 0.14
NCKIPSD-206ENST00000439518 UFD1Q92890 307 aa15.93■□□□□ 0.14
NCKIPSD-206ENST00000439518 TMEM203Q969S6 136 aa15.93■□□□□ 0.14
NCKIPSD-206ENST00000439518 NABP2Q9BQ15 211 aa15.93■□□□□ 0.14
NCKIPSD-206ENST00000439518 MRPL20Q9BYC9 149 aaKnown RBP15.93■□□□□ 0.14
NCKIPSD-206ENST00000439518 GPR61Q9BZJ8 451 aa15.93■□□□□ 0.14
NCKIPSD-206ENST00000439518 ZNF580Q9UK33 172 aa15.93■□□□□ 0.14
NCKIPSD-206ENST00000439518 A0A0A6YYD4 124 aa15.92■□□□□ 0.14
NCKIPSD-206ENST00000439518 WI2-2373I1.2A0A1W2PRP0 233 aa15.92■□□□□ 0.14
NCKIPSD-206ENST00000439518 RRP9O43818 475 aaKnown RBP15.92■□□□□ 0.14
NCKIPSD-206ENST00000439518 IGHG4P01861 327 aa15.92■□□□□ 0.14
NCKIPSD-206ENST00000439518 ELANEP08246 267 aa15.92■□□□□ 0.14
NCKIPSD-206ENST00000439518 MYF6P23409 242 aa15.92■□□□□ 0.14
NCKIPSD-206ENST00000439518 HOXD3P31249 432 aaPredicted RBP15.92■□□□□ 0.14
NCKIPSD-206ENST00000439518 ZNF833PQ6ZTB9 187 aa15.92■□□□□ 0.14
NCKIPSD-206ENST00000439518 SVOPQ8N4V2 548 aa15.92■□□□□ 0.14
NCKIPSD-206ENST00000439518 RAX2Q96IS3 184 aa15.92■□□□□ 0.14
NCKIPSD-206ENST00000439518 GFI1Q99684 422 aa15.92■□□□□ 0.14
NCKIPSD-206ENST00000439518 LPAR5Q9H1C0 372 aa15.92■□□□□ 0.14
NCKIPSD-206ENST00000439518 ISYNA1Q9NPH2 558 aa15.92■□□□□ 0.14
NCKIPSD-206ENST00000439518 ABRACLQ9P1F3 81 aa15.92■□□□□ 0.14
NCKIPSD-206ENST00000439518 COL7A1Q02388 2944 aa15.91■□□□□ 0.14
NCKIPSD-206ENST00000439518 BLVRBP30043 206 aaPredicted RBP15.91■□□□□ 0.14
NCKIPSD-206ENST00000439518 OR3A3P47888 321 aa15.91■□□□□ 0.14
NCKIPSD-206ENST00000439518 CDX1P47902 265 aaPredicted RBP15.91■□□□□ 0.14
NCKIPSD-206ENST00000439518 MMDQ15546 238 aa15.91■□□□□ 0.14
NCKIPSD-206ENST00000439518 CXorf66Q5JRM2 361 aaPredicted RBP15.91■□□□□ 0.14
NCKIPSD-206ENST00000439518 LCNL1Q6ZST4 164 aa15.91■□□□□ 0.14
NCKIPSD-206ENST00000439518 FAM89BQ8N5H3 189 aa15.91■□□□□ 0.14
NCKIPSD-206ENST00000439518 OR2AK2Q8NG84 335 aa15.91■□□□□ 0.14
NCKIPSD-206ENST00000439518 RITA1Q96K30 269 aa15.91■□□□□ 0.14
NCKIPSD-206ENST00000439518 MCRIP2Q9BUT9 160 aaKnown RBP15.91■□□□□ 0.14
NCKIPSD-206ENST00000439518 ANKRD60Q9BZ19 345 aa15.91■□□□□ 0.14
NCKIPSD-206ENST00000439518 IFI27L2Q9H2X8 130 aa15.91■□□□□ 0.14
NCKIPSD-206ENST00000439518 SAA2-SAA4A0A096LPE2 208 aa15.9■□□□□ 0.14
NCKIPSD-206ENST00000439518 CCL24O00175 119 aa15.9■□□□□ 0.14
NCKIPSD-206ENST00000439518 SLC17A2O00624 439 aa15.9■□□□□ 0.14
NCKIPSD-206ENST00000439518 RGS10O43665 173 aa15.9■□□□□ 0.14
NCKIPSD-206ENST00000439518 SAA2P0DJI9 122 aaPredicted RBP15.9■□□□□ 0.14
NCKIPSD-206ENST00000439518 ACTBP60709 375 aa15.9■□□□□ 0.14
NCKIPSD-206ENST00000439518 RPS25P62851 125 aaKnown RBP15.9■□□□□ 0.14
NCKIPSD-206ENST00000439518 DUX3Q96PT4 197 aa15.9■□□□□ 0.14
NCKIPSD-206ENST00000439518 PLEKHJ1Q9NW61 149 aa15.9■□□□□ 0.14
NCKIPSD-206ENST00000439518 ZNF107Q9UII5 783 aaPredicted RBP15.9■□□□□ 0.14
NCKIPSD-206ENST00000439518 TRBV6-6A0A0A6YYG2 114 aa15.89■□□□□ 0.13
NCKIPSD-206ENST00000439518 SOCS1O15524 211 aa15.89■□□□□ 0.13
NCKIPSD-206ENST00000439518 HSMCR30P0CW71 290 aa15.89■□□□□ 0.13
NCKIPSD-206ENST00000439518 SLC2A2P11168 524 aaPredicted RBP15.89■□□□□ 0.13
NCKIPSD-206ENST00000439518 CPEP16870 476 aa15.89■□□□□ 0.13
NCKIPSD-206ENST00000439518 VDAC1P21796 283 aa15.89■□□□□ 0.13
NCKIPSD-206ENST00000439518 PSMB8P28062 276 aa15.89■□□□□ 0.13
NCKIPSD-206ENST00000439518 MLLT11Q13015 90 aaPredicted RBP15.89■□□□□ 0.13
NCKIPSD-206ENST00000439518 KIR2DS1Q14954 304 aa15.89■□□□□ 0.13
NCKIPSD-206ENST00000439518 P2RY14Q15391 338 aa15.89■□□□□ 0.13
NCKIPSD-206ENST00000439518 TRAM1Q15629 374 aa15.89■□□□□ 0.13
NCKIPSD-206ENST00000439518 MOB1BQ7L9L4 216 aa15.89■□□□□ 0.13
NCKIPSD-206ENST00000439518 IL1F10Q8WWZ1 152 aa15.89■□□□□ 0.13
NCKIPSD-206ENST00000439518 DPF1Q92782 380 aa15.89■□□□□ 0.13
NCKIPSD-206ENST00000439518 KCTD7Q96MP8 289 aa15.89■□□□□ 0.13
NCKIPSD-206ENST00000439518 ZNF251Q9BRH9 671 aa15.89■□□□□ 0.13
NCKIPSD-206ENST00000439518 RIMS4Q9H426 269 aaPredicted RBP15.89■□□□□ 0.13
NCKIPSD-206ENST00000439518 STEAP1Q9UHE8 339 aa15.89■□□□□ 0.13
NCKIPSD-206ENST00000439518 FOXI3A8MTJ6 420 aaPredicted RBP15.88■□□□□ 0.13
NCKIPSD-206ENST00000439518 ARL6IP5O75915 188 aa15.88■□□□□ 0.13
NCKIPSD-206ENST00000439518 ARSBP15848 533 aa15.88■□□□□ 0.13
NCKIPSD-206ENST00000439518 CRHBPP24387 322 aa15.88■□□□□ 0.13
NCKIPSD-206ENST00000439518 PSMA1P25786 263 aaKnown RBP15.88■□□□□ 0.13
NCKIPSD-206ENST00000439518 CNTFRP26992 372 aa15.88■□□□□ 0.13
NCKIPSD-206ENST00000439518 FAM71F2Q6NXP2 309 aa15.88■□□□□ 0.13
NCKIPSD-206ENST00000439518 PRSS48Q7RTY5 328 aa15.88■□□□□ 0.13
NCKIPSD-206ENST00000439518 CHCHD6Q9BRQ6 235 aa15.88■□□□□ 0.13
NCKIPSD-206ENST00000439518 URM1Q9BTM9 101 aaKnown RBP15.88■□□□□ 0.13
NCKIPSD-206ENST00000439518 PARP12Q9H0J9 701 aaKnown RBP15.88■□□□□ 0.13
NCKIPSD-206ENST00000439518 PLGRKTQ9HBL7 147 aa15.88■□□□□ 0.13
NCKIPSD-206ENST00000439518 CHMP1AQ9HD42 196 aaPredicted RBP15.88■□□□□ 0.13
NCKIPSD-206ENST00000439518 AK3Q9UIJ7 227 aa15.88■□□□□ 0.13
NCKIPSD-206ENST00000439518 AK6Q9Y3D8 172 aaKnown RBP15.88■□□□□ 0.13
NCKIPSD-206ENST00000439518 NBR2O15453 112 aa15.87■□□□□ 0.13
NCKIPSD-206ENST00000439518 ST8SIA5O15466 376 aa15.87■□□□□ 0.13
NCKIPSD-206ENST00000439518 HLA-DRB1P01911 266 aa15.87■□□□□ 0.13
NCKIPSD-206ENST00000439518 OR5H8P0DN80 308 aa15.87■□□□□ 0.13
NCKIPSD-206ENST00000439518 PPIFP30405 207 aaKnown RBP15.87■□□□□ 0.13
NCKIPSD-206ENST00000439518 C5orf64Q2M2E5 130 aa15.87■□□□□ 0.13
NCKIPSD-206ENST00000439518 DEFB136Q30KP8 78 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms