RNA–Protein interactions for RNA: ENST00000439512.5

TOM1-207, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 3

Gene TOM1, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-207ENST00000439512 C12orf4Q9NQ89 552 aa13.19□□□□□ -0.3
TOM1-207ENST00000439512 CMYA5Q8N3K9 4069 aa13.18□□□□□ -0.3
TOM1-207ENST00000439512 AIREO43918 545 aa13.18□□□□□ -0.3
TOM1-207ENST00000439512 TIMM50Q3ZCQ8 353 aa13.18□□□□□ -0.3
TOM1-207ENST00000439512 IDNKQ5T6J7 187 aa13.18□□□□□ -0.3
TOM1-207ENST00000439512 C11orf88Q6PI97 169 aa13.18□□□□□ -0.3
TOM1-207ENST00000439512 Q8N2B8 174 aa13.18□□□□□ -0.3
TOM1-207ENST00000439512 RTN4IP1Q8WWV3 396 aaPredicted RBP13.18□□□□□ -0.3
TOM1-207ENST00000439512 SERTAD4Q9NUC0 356 aa13.18□□□□□ -0.3
TOM1-207ENST00000439512 MGAT4AQ9UM21 535 aa13.18□□□□□ -0.3
TOM1-207ENST00000439512 TRIM64CA6NLI5 447 aa13.17□□□□□ -0.3
TOM1-207ENST00000439512 IGKV1D-33P01593 117 aa13.17□□□□□ -0.3
TOM1-207ENST00000439512 IGKV1-33P01594 117 aa13.17□□□□□ -0.3
TOM1-207ENST00000439512 LPLP06858 475 aa13.17□□□□□ -0.3
TOM1-207ENST00000439512 SCTP09683 121 aa13.17□□□□□ -0.3
TOM1-207ENST00000439512 TMEM11P17152 192 aa13.17□□□□□ -0.3
TOM1-207ENST00000439512 TGFBR1P36897 503 aa13.17□□□□□ -0.3
TOM1-207ENST00000439512 LSM3P62310 102 aaKnown RBP13.17□□□□□ -0.3
TOM1-207ENST00000439512 HLA-DRB3P79483 266 aa13.17□□□□□ -0.3
TOM1-207ENST00000439512 ABCA11PQ4W5N1 156 aa13.17□□□□□ -0.3
TOM1-207ENST00000439512 LY6G6FQ5SQ64 297 aa13.17□□□□□ -0.3
TOM1-207ENST00000439512 TGIF2LXQ8IUE1 241 aa13.17□□□□□ -0.3
TOM1-207ENST00000439512 KLHDC1Q8N7A1 406 aa13.17□□□□□ -0.3
TOM1-207ENST00000439512 OR2AK2Q8NG84 335 aa13.17□□□□□ -0.3
TOM1-207ENST00000439512 ABHD14AQ9BUJ0 271 aa13.17□□□□□ -0.3
TOM1-207ENST00000439512 SH2D7A6NKC9 451 aaPredicted RBP13.16□□□□□ -0.3
TOM1-207ENST00000439512 ZNF736B4DX44 427 aaPredicted RBP13.16□□□□□ -0.3
TOM1-207ENST00000439512 TRDCB7Z8K6 153 aa13.16□□□□□ -0.3
TOM1-207ENST00000439512 MFNGO00587 321 aa13.16□□□□□ -0.3
TOM1-207ENST00000439512 HSPA12AO43301 675 aa13.16□□□□□ -0.3
TOM1-207ENST00000439512 PEX14O75381 377 aa13.16□□□□□ -0.3
TOM1-207ENST00000439512 AMY1AP04745 511 aa13.16□□□□□ -0.3
TOM1-207ENST00000439512 AMY2AP04746 511 aa13.16□□□□□ -0.3
TOM1-207ENST00000439512 HIST1H1DP16402 221 aaKnown RBP13.16□□□□□ -0.3
TOM1-207ENST00000439512 CEACAM6P40199 344 aa13.16□□□□□ -0.3
TOM1-207ENST00000439512 ZNF137PP52743 207 aa13.16□□□□□ -0.3
TOM1-207ENST00000439512 ARFRP1Q13795 201 aa13.16□□□□□ -0.3
TOM1-207ENST00000439512 CDNFQ49AH0 187 aa13.16□□□□□ -0.3
TOM1-207ENST00000439512 C11orf44Q8N8P7 122 aa13.16□□□□□ -0.3
TOM1-207ENST00000439512 LGALS14Q8TCE9 139 aa13.16□□□□□ -0.3
TOM1-207ENST00000439512 SLC23A1Q9UHI7 598 aa13.16□□□□□ -0.3
TOM1-207ENST00000439512 NBEAL1Q6ZS30 2694 aa13.15□□□□□ -0.3
TOM1-207ENST00000439512 M0QZK8 103 aa13.15□□□□□ -0.3
TOM1-207ENST00000439512 ZBTB25P24278 435 aa13.15□□□□□ -0.3
TOM1-207ENST00000439512 TALDO1P37837 337 aa13.15□□□□□ -0.3
TOM1-207ENST00000439512 VDAC2P45880 294 aaPredicted RBP13.15□□□□□ -0.3
TOM1-207ENST00000439512 EBI3Q14213 229 aa13.15□□□□□ -0.3
TOM1-207ENST00000439512 HERPUD1Q15011 391 aa13.15□□□□□ -0.3
TOM1-207ENST00000439512 TMEM95Q3KNT9 176 aa13.15□□□□□ -0.3
TOM1-207ENST00000439512 C9orf152Q5JTZ5 239 aa13.15□□□□□ -0.3
TOM1-207ENST00000439512 ODF3L1Q8IXM7 274 aa13.15□□□□□ -0.3
TOM1-207ENST00000439512 OR5H6Q8NGV6 325 aa13.15□□□□□ -0.3
TOM1-207ENST00000439512 OR2T10Q8NGZ9 312 aa13.15□□□□□ -0.3
TOM1-207ENST00000439512 RBMXL1Q96E39 390 aaKnown RBP13.15□□□□□ -0.3
TOM1-207ENST00000439512 EAF1Q96JC9 268 aaPredicted RBP13.15□□□□□ -0.3
TOM1-207ENST00000439512 PARP12Q9H0J9 701 aaKnown RBP13.15□□□□□ -0.3
TOM1-207ENST00000439512 OR1A1Q9P1Q5 309 aa13.15□□□□□ -0.3
TOM1-207ENST00000439512 ZNF230Q9UIE0 474 aaPredicted RBP13.15□□□□□ -0.3
TOM1-207ENST00000439512 MOB4Q9Y3A3 225 aa13.15□□□□□ -0.3
TOM1-207ENST00000439512 SERPINE3A8MV23 424 aa13.14□□□□□ -0.31
TOM1-207ENST00000439512 ST8SIA5O15466 376 aa13.14□□□□□ -0.31
TOM1-207ENST00000439512 TXNL1O43396 289 aa13.14□□□□□ -0.31
TOM1-207ENST00000439512 LANCL1O43813 399 aa13.14□□□□□ -0.31
TOM1-207ENST00000439512 FCGR3AP08637 254 aa13.14□□□□□ -0.31
TOM1-207ENST00000439512 CD1BP29016 333 aa13.14□□□□□ -0.31
TOM1-207ENST00000439512 RPS19P39019 145 aaKnown RBP13.14□□□□□ -0.31
TOM1-207ENST00000439512 OR3A3P47888 321 aa13.14□□□□□ -0.31
TOM1-207ENST00000439512 ARL6IP1Q15041 203 aa13.14□□□□□ -0.31
TOM1-207ENST00000439512 PRR31Q5SQ13 230 aa13.14□□□□□ -0.31
TOM1-207ENST00000439512 HIST2H2BDQ6DRA6 164 aa13.14□□□□□ -0.31
TOM1-207ENST00000439512 MAFIPQ8WZ33 124 aa13.14□□□□□ -0.31
TOM1-207ENST00000439512 ELF5Q9UKW6 265 aaPredicted RBP13.14□□□□□ -0.31
TOM1-207ENST00000439512 PKD1L1Q8TDX9 2849 aa13.13□□□□□ -0.31
TOM1-207ENST00000439512 IGKV1-6A0A0C4DH72 117 aa13.13□□□□□ -0.31
TOM1-207ENST00000439512 NCBP2LA6PVI3 153 aaKnown RBP13.13□□□□□ -0.31
TOM1-207ENST00000439512 FABP7O15540 132 aa13.13□□□□□ -0.31
TOM1-207ENST00000439512 MOSP00540 346 aa13.13□□□□□ -0.31
TOM1-207ENST00000439512 GSTT2P0CG29 244 aa13.13□□□□□ -0.31
TOM1-207ENST00000439512 GSTT2BP0CG30 244 aa13.13□□□□□ -0.31
TOM1-207ENST00000439512 IZUMO1Q8IYV9 350 aa13.13□□□□□ -0.31
TOM1-207ENST00000439512 FUNDC2Q9BWH2 189 aa13.13□□□□□ -0.31
TOM1-207ENST00000439512 C11orf54Q9H0W9 315 aaPredicted RBP13.13□□□□□ -0.31
TOM1-207ENST00000439512 RHBDL2Q9NX52 303 aa13.13□□□□□ -0.31
TOM1-207ENST00000439512 RNF150Q9ULK6 438 aa13.13□□□□□ -0.31
TOM1-207ENST00000439512 SAA2-SAA4A0A096LPE2 208 aa13.12□□□□□ -0.31
TOM1-207ENST00000439512 M0QZ24 198 aa13.12□□□□□ -0.31
TOM1-207ENST00000439512 SAA2P0DJI9 122 aaPredicted RBP13.12□□□□□ -0.31
TOM1-207ENST00000439512 SMIM18P0DKX4 95 aa13.12□□□□□ -0.31
TOM1-207ENST00000439512 KIR2DS1Q14954 304 aa13.12□□□□□ -0.31
TOM1-207ENST00000439512 CENPVQ7Z7K6 275 aaPredicted RBP13.12□□□□□ -0.31
TOM1-207ENST00000439512 CROCCP3Q8IVE0 287 aa13.12□□□□□ -0.31
TOM1-207ENST00000439512 C5orf56Q8N8D9 126 aa13.12□□□□□ -0.31
TOM1-207ENST00000439512 OR4A4PQ8NGN8 299 aa13.12□□□□□ -0.31
TOM1-207ENST00000439512 PHF21AQ96BD5 680 aa13.12□□□□□ -0.31
TOM1-207ENST00000439512 ABHD14BQ96IU4 210 aa13.12□□□□□ -0.31
TOM1-207ENST00000439512 MRPL20Q9BYC9 149 aaKnown RBP13.12□□□□□ -0.31
TOM1-207ENST00000439512 WNT10AQ9GZT5 417 aa13.12□□□□□ -0.31
TOM1-207ENST00000439512 IFI27L2Q9H2X8 130 aa13.12□□□□□ -0.31
TOM1-207ENST00000439512 PIPOXQ9P0Z9 390 aa13.12□□□□□ -0.31
TOM1-207ENST00000439512 ETV7Q9Y603 341 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms