RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 TMEM38BQ9NVV0 291 aa8.52□□□□□ -1.05
CDC42SE1-202ENST00000439374 TMEM131Q92545 1883 aa8.52□□□□□ -1.05
CDC42SE1-202ENST00000439374 ADAMTS9Q9P2N4 1935 aa8.51□□□□□ -1.05
CDC42SE1-202ENST00000439374 BAXQ07812 192 aa8.51□□□□□ -1.05
CDC42SE1-202ENST00000439374 C1orf210Q8IVY1 113 aa8.51□□□□□ -1.05
CDC42SE1-202ENST00000439374 CCDC71LQ8N9Z2 235 aa8.51□□□□□ -1.05
CDC42SE1-202ENST00000439374 LFNGQ8NES3 379 aa8.51□□□□□ -1.05
CDC42SE1-202ENST00000439374 EXTL1Q92935 676 aa8.51□□□□□ -1.05
CDC42SE1-202ENST00000439374 BTF3L4Q96K17 158 aa8.51□□□□□ -1.05
CDC42SE1-202ENST00000439374 SIGLEC12Q96PQ1 595 aa8.51□□□□□ -1.05
CDC42SE1-202ENST00000439374 HINT2Q9BX68 163 aa8.51□□□□□ -1.05
CDC42SE1-202ENST00000439374 ANGPTL4Q9BY76 406 aa8.51□□□□□ -1.05
CDC42SE1-202ENST00000439374 PLEKHF2Q9H8W4 249 aa8.51□□□□□ -1.05
CDC42SE1-202ENST00000439374 APC2O95996 2303 aa8.51□□□□□ -1.05
CDC42SE1-202ENST00000439374 C1QTNF9BB2RNN3 333 aa8.51□□□□□ -1.05
CDC42SE1-202ENST00000439374 H0Y8G0 127 aa8.51□□□□□ -1.05
CDC42SE1-202ENST00000439374 ZNF737O75373 536 aa8.51□□□□□ -1.05
CDC42SE1-202ENST00000439374 TFF1P04155 84 aa8.51□□□□□ -1.05
CDC42SE1-202ENST00000439374 PSG2P11465 335 aa8.51□□□□□ -1.05
CDC42SE1-202ENST00000439374 Q0VFX4 171 aa8.51□□□□□ -1.05
CDC42SE1-202ENST00000439374 ZNF816Q0VGE8 651 aaPredicted RBP8.51□□□□□ -1.05
CDC42SE1-202ENST00000439374 ZNF709Q8N972 641 aa8.51□□□□□ -1.05
CDC42SE1-202ENST00000439374 OR1P1Q8NH06 330 aa8.51□□□□□ -1.05
CDC42SE1-202ENST00000439374 MS4A10Q96PG2 267 aa8.51□□□□□ -1.05
CDC42SE1-202ENST00000439374 IGKV1-12A0A0C4DH73 117 aa8.5□□□□□ -1.05
CDC42SE1-202ENST00000439374 A0A0G2JRQ6 117 aa8.5□□□□□ -1.05
CDC42SE1-202ENST00000439374 TRAPPC2LH3BP13 241 aa8.5□□□□□ -1.05
CDC42SE1-202ENST00000439374 IGKV1D-12P01611 117 aa8.5□□□□□ -1.05
CDC42SE1-202ENST00000439374 FGF5P12034 268 aa8.5□□□□□ -1.05
CDC42SE1-202ENST00000439374 BCL3P20749 454 aa8.5□□□□□ -1.05
CDC42SE1-202ENST00000439374 NTF3P20783 257 aa8.5□□□□□ -1.05
CDC42SE1-202ENST00000439374 TCL1AP56279 114 aa8.5□□□□□ -1.05
CDC42SE1-202ENST00000439374 LINC00205P59089 165 aa8.5□□□□□ -1.05
CDC42SE1-202ENST00000439374 ARG2P78540 354 aa8.5□□□□□ -1.05
CDC42SE1-202ENST00000439374 TNFRSF9Q07011 255 aa8.5□□□□□ -1.05
CDC42SE1-202ENST00000439374 PPP1R32Q7Z5V6 425 aa8.5□□□□□ -1.05
CDC42SE1-202ENST00000439374 PTX4Q96A99 478 aa8.5□□□□□ -1.05
CDC42SE1-202ENST00000439374 GINS3Q9BRX5 216 aa8.5□□□□□ -1.05
CDC42SE1-202ENST00000439374 OR2H1Q9GZK4 316 aa8.5□□□□□ -1.05
CDC42SE1-202ENST00000439374 BOKQ9UMX3 212 aaPredicted RBP8.5□□□□□ -1.05
CDC42SE1-202ENST00000439374 TECTAO75443 2155 aa8.5□□□□□ -1.05
CDC42SE1-202ENST00000439374 CUL9Q8IWT3 2517 aa8.5□□□□□ -1.05
CDC42SE1-202ENST00000439374 LOC102725191A0A1B0GVB3 256 aa8.5□□□□□ -1.05
CDC42SE1-202ENST00000439374 CA6P23280 308 aa8.5□□□□□ -1.05
CDC42SE1-202ENST00000439374 TCTAP57738 103 aa8.5□□□□□ -1.05
CDC42SE1-202ENST00000439374 TRA2AQ13595 282 aaKnown RBP eCLIP8.5□□□□□ -1.05
CDC42SE1-202ENST00000439374 RAB35Q15286 201 aa8.5□□□□□ -1.05
CDC42SE1-202ENST00000439374 OR1C1Q15619 314 aa8.5□□□□□ -1.05
CDC42SE1-202ENST00000439374 FAM27BQ5VT28 67 aa8.5□□□□□ -1.05
CDC42SE1-202ENST00000439374 MKXQ8IYA7 352 aa8.5□□□□□ -1.05
CDC42SE1-202ENST00000439374 FADS6Q8N9I5 356 aa8.5□□□□□ -1.05
CDC42SE1-202ENST00000439374 PROK2Q9HC23 129 aa8.5□□□□□ -1.05
CDC42SE1-202ENST00000439374 GPR35Q9HC97 309 aa8.5□□□□□ -1.05
CDC42SE1-202ENST00000439374 ZFHX4Q86UP3 3567 aa8.5□□□□□ -1.05
CDC42SE1-202ENST00000439374 PAGE4O60829 102 aa8.5□□□□□ -1.05
CDC42SE1-202ENST00000439374 RPP30P78346 268 aaKnown RBP8.5□□□□□ -1.05
CDC42SE1-202ENST00000439374 CPEB3Q8NE35 698 aaKnown RBP8.5□□□□□ -1.05
CDC42SE1-202ENST00000439374 CLDND2Q8NHS1 167 aa8.5□□□□□ -1.05
CDC42SE1-202ENST00000439374 Q9N2K0 584 aa8.5□□□□□ -1.05
CDC42SE1-202ENST00000439374 FKBP11Q9NYL4 201 aa8.5□□□□□ -1.05
CDC42SE1-202ENST00000439374 FOXJ2Q9P0K8 574 aa8.5□□□□□ -1.05
CDC42SE1-202ENST00000439374 KIAA1456Q9P272 454 aa8.5□□□□□ -1.05
CDC42SE1-202ENST00000439374 B4GALT7Q9UBV7 327 aa8.5□□□□□ -1.05
CDC42SE1-202ENST00000439374 PRSS50Q9UI38 385 aa8.5□□□□□ -1.05
CDC42SE1-202ENST00000439374 POMT1Q9Y6A1 747 aa8.5□□□□□ -1.05
CDC42SE1-202ENST00000439374 CST2P09228 141 aa8.49□□□□□ -1.05
CDC42SE1-202ENST00000439374 PMCHP20382 165 aa8.49□□□□□ -1.05
CDC42SE1-202ENST00000439374 GZMHP20718 246 aa8.49□□□□□ -1.05
CDC42SE1-202ENST00000439374 SRD5A2P31213 254 aa8.49□□□□□ -1.05
CDC42SE1-202ENST00000439374 MPLP40238 635 aa8.49□□□□□ -1.05
CDC42SE1-202ENST00000439374 SPCS3P61009 180 aa8.49□□□□□ -1.05
CDC42SE1-202ENST00000439374 BSXQ3C1V8 233 aa8.49□□□□□ -1.05
CDC42SE1-202ENST00000439374 NABP1Q96AH0 204 aa8.49□□□□□ -1.05
CDC42SE1-202ENST00000439374 RBM14Q96PK6 669 aaKnown RBP8.49□□□□□ -1.05
CDC42SE1-202ENST00000439374 SCRT1Q9BWW7 348 aa8.49□□□□□ -1.05
CDC42SE1-202ENST00000439374 WNT5BQ9H1J7 359 aa8.49□□□□□ -1.05
CDC42SE1-202ENST00000439374 PSENENQ9NZ42 101 aa8.49□□□□□ -1.05
CDC42SE1-202ENST00000439374 SEMA5BQ9P283 1151 aa8.49□□□□□ -1.05
CDC42SE1-202ENST00000439374 ABI3Q9P2A4 366 aa8.49□□□□□ -1.05
CDC42SE1-202ENST00000439374 CFAP47Q6ZTR5 3102 aa8.49□□□□□ -1.05
CDC42SE1-202ENST00000439374 SYNGR1O43759 233 aa8.49□□□□□ -1.05
CDC42SE1-202ENST00000439374 TNFSF15O95150 251 aa8.49□□□□□ -1.05
CDC42SE1-202ENST00000439374 CCL11P51671 97 aa8.49□□□□□ -1.05
CDC42SE1-202ENST00000439374 PRDX4Q13162 271 aa8.49□□□□□ -1.05
CDC42SE1-202ENST00000439374 IL15RAQ13261 267 aa8.49□□□□□ -1.05
CDC42SE1-202ENST00000439374 HERPUD1Q15011 391 aa8.49□□□□□ -1.05
CDC42SE1-202ENST00000439374 ARL6IP1Q15041 203 aa8.49□□□□□ -1.05
CDC42SE1-202ENST00000439374 GCSAMLQ5JQS6 135 aa8.49□□□□□ -1.05
CDC42SE1-202ENST00000439374 BAGE3Q86Y29 109 aa8.49□□□□□ -1.05
CDC42SE1-202ENST00000439374 BAGE2Q86Y30 109 aa8.49□□□□□ -1.05
CDC42SE1-202ENST00000439374 PSMF1Q92530 271 aa8.49□□□□□ -1.05
CDC42SE1-202ENST00000439374 CLDN23Q96B33 292 aa8.49□□□□□ -1.05
CDC42SE1-202ENST00000439374 APH1AQ96BI3 265 aa8.49□□□□□ -1.05
CDC42SE1-202ENST00000439374 MSI2Q96DH6 328 aaKnown RBP8.49□□□□□ -1.05
CDC42SE1-202ENST00000439374 GOLT1BQ9Y3E0 138 aa8.49□□□□□ -1.05
CDC42SE1-202ENST00000439374 LRP4O75096 1905 aa8.49□□□□□ -1.05
CDC42SE1-202ENST00000439374 ABCA4P78363 2273 aa8.49□□□□□ -1.05
CDC42SE1-202ENST00000439374 BCL2P10415 239 aa8.49□□□□□ -1.05
CDC42SE1-202ENST00000439374 EDDM3BP56851 147 aa8.49□□□□□ -1.05
CDC42SE1-202ENST00000439374 HIST1H3AP68431 136 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms