RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 C1orf167Q5SNV9 1468 aa1.79□□□□□ -2.12
TRAPPC13-204ENST00000438419 ZSWIM8A7E2V4 1837 aa1.79□□□□□ -2.12
TRAPPC13-204ENST00000438419 SSH2Q76I76 1423 aa1.79□□□□□ -2.12
TRAPPC13-204ENST00000438419 PLXNB1O43157 2135 aa1.79□□□□□ -2.12
TRAPPC13-204ENST00000438419 FMN2Q9NZ56 1722 aa1.79□□□□□ -2.12
TRAPPC13-204ENST00000438419 POLR3AO14802 1390 aaPredicted RBP1.79□□□□□ -2.12
TRAPPC13-204ENST00000438419 ARGFXA6NJG6 315 aa1.79□□□□□ -2.12
TRAPPC13-204ENST00000438419 C8orf87E5RJ46 101 aa1.79□□□□□ -2.12
TRAPPC13-204ENST00000438419 J3QLI3 93 aa1.79□□□□□ -2.12
TRAPPC13-204ENST00000438419 FGF16O43320 207 aa1.79□□□□□ -2.12
TRAPPC13-204ENST00000438419 POP7O75817 140 aaKnown RBP1.79□□□□□ -2.12
TRAPPC13-204ENST00000438419 CDK14O94921 469 aa1.79□□□□□ -2.12
TRAPPC13-204ENST00000438419 HLA-AP01891 365 aaKnown RBP1.79□□□□□ -2.12
TRAPPC13-204ENST00000438419 CGB3P0DN86 165 aa1.79□□□□□ -2.12
TRAPPC13-204ENST00000438419 CGB7P0DN87 165 aa1.79□□□□□ -2.12
TRAPPC13-204ENST00000438419 ATF1P18846 271 aa1.79□□□□□ -2.12
TRAPPC13-204ENST00000438419 CNTFRP26992 372 aa1.79□□□□□ -2.12
TRAPPC13-204ENST00000438419 RCVRNP35243 200 aa1.79□□□□□ -2.12
TRAPPC13-204ENST00000438419 ACTR1BP42025 376 aa1.79□□□□□ -2.12
TRAPPC13-204ENST00000438419 CRATP43155 626 aa1.79□□□□□ -2.12
TRAPPC13-204ENST00000438419 HSPA13P48723 471 aa1.79□□□□□ -2.12
TRAPPC13-204ENST00000438419 PSMD7P51665 324 aa1.79□□□□□ -2.12
TRAPPC13-204ENST00000438419 ZNHIT3Q15649 155 aaPredicted RBP1.79□□□□□ -2.12
TRAPPC13-204ENST00000438419 BCL2A1Q16548 175 aa1.79□□□□□ -2.12
TRAPPC13-204ENST00000438419 SPIN3Q5JUX0 258 aa1.79□□□□□ -2.12
TRAPPC13-204ENST00000438419 FAM162BQ5T6X4 162 aa1.79□□□□□ -2.12
TRAPPC13-204ENST00000438419 AMMECR1LQ6DCA0 310 aa1.79□□□□□ -2.12
TRAPPC13-204ENST00000438419 FAM19A3Q7Z5A8 133 aa1.79□□□□□ -2.12
TRAPPC13-204ENST00000438419 SPATA24Q86W54 205 aa1.79□□□□□ -2.12
TRAPPC13-204ENST00000438419 OR5AK3PQ8NH89 298 aa1.79□□□□□ -2.12
TRAPPC13-204ENST00000438419 CLDN23Q96B33 292 aa1.79□□□□□ -2.12
TRAPPC13-204ENST00000438419 TVP23CQ96ET8 276 aa1.79□□□□□ -2.12
TRAPPC13-204ENST00000438419 TMEM56Q96MV1 263 aa1.79□□□□□ -2.12
TRAPPC13-204ENST00000438419 FAM210AQ96ND0 272 aa1.79□□□□□ -2.12
TRAPPC13-204ENST00000438419 POTEKPQ9BYX7 375 aa1.79□□□□□ -2.12
TRAPPC13-204ENST00000438419 UPF3BQ9BZI7 483 aaKnown RBP1.79□□□□□ -2.12
TRAPPC13-204ENST00000438419 ABCG5Q9H222 651 aa1.79□□□□□ -2.12
TRAPPC13-204ENST00000438419 OR51E2Q9H255 320 aa1.79□□□□□ -2.12
TRAPPC13-204ENST00000438419 EURLQ9NYK6 297 aa1.79□□□□□ -2.12
TRAPPC13-204ENST00000438419 ADGRL2O95490 1459 aa1.79□□□□□ -2.12
TRAPPC13-204ENST00000438419 PXDNQ92626 1479 aa1.79□□□□□ -2.12
TRAPPC13-204ENST00000438419 FYCO1Q9BQS8 1478 aa1.79□□□□□ -2.12
TRAPPC13-204ENST00000438419 CENPFP49454 3210 aa1.79□□□□□ -2.12
TRAPPC13-204ENST00000438419 NALCNQ8IZF0 1738 aa1.79□□□□□ -2.12
TRAPPC13-204ENST00000438419 CFAP47Q6ZTR5 3102 aa1.79□□□□□ -2.12
TRAPPC13-204ENST00000438419 PTPN13Q12923 2485 aa1.78□□□□□ -2.12
TRAPPC13-204ENST00000438419 PIK3C2BO00750 1634 aa1.78□□□□□ -2.12
TRAPPC13-204ENST00000438419 PHRF1Q9P1Y6 1649 aaKnown RBP1.78□□□□□ -2.12
TRAPPC13-204ENST00000438419 TMEM213A2RRL7 107 aa1.78□□□□□ -2.12
TRAPPC13-204ENST00000438419 OR5H14A6NHG9 310 aa1.78□□□□□ -2.12
TRAPPC13-204ENST00000438419 C9J4A7 227 aa1.78□□□□□ -2.12
TRAPPC13-204ENST00000438419 H3BMM0 161 aa1.78□□□□□ -2.12
TRAPPC13-204ENST00000438419 GOLGA8RI6L899 631 aa1.78□□□□□ -2.12
TRAPPC13-204ENST00000438419 GPR171O14626 319 aa1.78□□□□□ -2.12
TRAPPC13-204ENST00000438419 AQP9O43315 295 aa1.78□□□□□ -2.12
TRAPPC13-204ENST00000438419 RAB36O95755 333 aa1.78□□□□□ -2.12
TRAPPC13-204ENST00000438419 GPR75O95800 540 aa1.78□□□□□ -2.12
TRAPPC13-204ENST00000438419 IGHV3-53P01767 116 aa1.78□□□□□ -2.12
TRAPPC13-204ENST00000438419 PVALBP20472 110 aaPredicted RBP1.78□□□□□ -2.12
TRAPPC13-204ENST00000438419 PSMB6P28072 239 aa1.78□□□□□ -2.12
TRAPPC13-204ENST00000438419 FOXA1P55317 472 aa1.78□□□□□ -2.12
TRAPPC13-204ENST00000438419 MP68P56378 58 aa1.78□□□□□ -2.12
TRAPPC13-204ENST00000438419 MAP3K7CLP57077 242 aa1.78□□□□□ -2.12
TRAPPC13-204ENST00000438419 RAB8AP61006 207 aa1.78□□□□□ -2.12
TRAPPC13-204ENST00000438419 KRTAP25-1Q3LHN0 102 aa1.78□□□□□ -2.12
TRAPPC13-204ENST00000438419 Q6ZQT7 251 aa1.78□□□□□ -2.12
TRAPPC13-204ENST00000438419 TCF23Q7RTU1 214 aa1.78□□□□□ -2.12
TRAPPC13-204ENST00000438419 ZNF664Q8N3J9 261 aa1.78□□□□□ -2.12
TRAPPC13-204ENST00000438419 EIF4E3Q8N5X7 224 aaKnown RBP1.78□□□□□ -2.12
TRAPPC13-204ENST00000438419 OR4A5Q8NH83 315 aa1.78□□□□□ -2.12
TRAPPC13-204ENST00000438419 UBE2WQ96B02 151 aa1.78□□□□□ -2.12
TRAPPC13-204ENST00000438419 PPWD1Q96BP3 646 aaKnown RBP1.78□□□□□ -2.12
TRAPPC13-204ENST00000438419 ZNF514Q96K75 400 aaPredicted RBP1.78□□□□□ -2.12
TRAPPC13-204ENST00000438419 IGF2BP2-AS1Q96M15 143 aa1.78□□□□□ -2.12
TRAPPC13-204ENST00000438419 PRSS27Q9BQR3 290 aa1.78□□□□□ -2.12
TRAPPC13-204ENST00000438419 LLPHQ9BRT6 129 aaKnown RBP1.78□□□□□ -2.12
TRAPPC13-204ENST00000438419 EBPLQ9BY08 206 aa1.78□□□□□ -2.12
TRAPPC13-204ENST00000438419 SLC19A3Q9BZV2 496 aa1.78□□□□□ -2.12
TRAPPC13-204ENST00000438419 COMMD9Q9P000 198 aa1.78□□□□□ -2.12
TRAPPC13-204ENST00000438419 ZNF230Q9UIE0 474 aaPredicted RBP1.78□□□□□ -2.12
TRAPPC13-204ENST00000438419 TRPM2O94759 1503 aa1.78□□□□□ -2.12
TRAPPC13-204ENST00000438419 LRRIQ1Q96JM4 1722 aa1.78□□□□□ -2.12
TRAPPC13-204ENST00000438419 TECPR2O15040 1411 aa1.78□□□□□ -2.12
TRAPPC13-204ENST00000438419 PAPPAQ13219 1627 aa1.78□□□□□ -2.13
TRAPPC13-204ENST00000438419 KIF15Q9NS87 1388 aa1.78□□□□□ -2.13
TRAPPC13-204ENST00000438419 HIVEP2P31629 2446 aa1.77□□□□□ -2.13
TRAPPC13-204ENST00000438419 DUOX2Q9NRD8 1548 aa1.77□□□□□ -2.13
TRAPPC13-204ENST00000438419 TPRP12270 2363 aaKnown RBP1.77□□□□□ -2.13
TRAPPC13-204ENST00000438419 FABP12A6NFH5 140 aa1.77□□□□□ -2.13
TRAPPC13-204ENST00000438419 D6RAR5 112 aa1.77□□□□□ -2.13
TRAPPC13-204ENST00000438419 EPPINO95925 133 aa1.77□□□□□ -2.13
TRAPPC13-204ENST00000438419 PDYNP01213 254 aa1.77□□□□□ -2.13
TRAPPC13-204ENST00000438419 TPM3P06753 285 aa1.77□□□□□ -2.13
TRAPPC13-204ENST00000438419 GUSBP08236 651 aa1.77□□□□□ -2.13
TRAPPC13-204ENST00000438419 PET100P0DJ07 73 aa1.77□□□□□ -2.13
TRAPPC13-204ENST00000438419 ZNF708P17019 499 aa1.77□□□□□ -2.13
TRAPPC13-204ENST00000438419 EVI2BP34910 448 aa1.77□□□□□ -2.13
TRAPPC13-204ENST00000438419 UBE2G2P60604 165 aa1.77□□□□□ -2.13
TRAPPC13-204ENST00000438419 TPM4P67936 248 aa1.77□□□□□ -2.13
TRAPPC13-204ENST00000438419 CASP8Q14790 479 aa1.77□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms