RNA–Protein interactions for RNA: ENST00000438107.1

FAM239A-202, Transcript of family with sequence similarity 239 member A, humanhuman

TSL 5 BASIC

Gene FAM239A, Length 2,155 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM239A-202ENST00000438107 ZNF665Q9H7R5 613 aa16.33■□□□□ 0.2
FAM239A-202ENST00000438107 GAR1Q9NY12 217 aaKnown RBP16.33■□□□□ 0.2
FAM239A-202ENST00000438107 OR14J1Q9UGF5 321 aa16.33■□□□□ 0.2
FAM239A-202ENST00000438107 PRSS50Q9UI38 385 aa16.33■□□□□ 0.2
FAM239A-202ENST00000438107 VAX2Q9UIW0 290 aa16.33■□□□□ 0.2
FAM239A-202ENST00000438107 RBM7Q9Y580 266 aaKnown RBP16.33■□□□□ 0.2
FAM239A-202ENST00000438107 SEC14L6B5MCN3 397 aa16.33■□□□□ 0.2
FAM239A-202ENST00000438107 C9orf172C9J069 976 aa16.33■□□□□ 0.2
FAM239A-202ENST00000438107 CLDN34H7C241 214 aa16.33■□□□□ 0.2
FAM239A-202ENST00000438107 CYB5BO43169 146 aa16.33■□□□□ 0.2
FAM239A-202ENST00000438107 IL18BPO95998 194 aa16.33■□□□□ 0.2
FAM239A-202ENST00000438107 C1orf87Q8N0U7 546 aa16.33■□□□□ 0.2
FAM239A-202ENST00000438107 RCC1LQ96I51 464 aaKnown RBP16.33■□□□□ 0.2
FAM239A-202ENST00000438107 SDF2L1Q9HCN8 221 aa16.33■□□□□ 0.2
FAM239A-202ENST00000438107 TIMM9Q9Y5J7 89 aa16.33■□□□□ 0.2
FAM239A-202ENST00000438107 DMRT1Q9Y5R6 373 aa16.33■□□□□ 0.2
FAM239A-202ENST00000438107 ELOA3CA0A087WX78 387 aaPredicted RBP16.32■□□□□ 0.2
FAM239A-202ENST00000438107 A0A1W2PR80 420 aa16.32■□□□□ 0.2
FAM239A-202ENST00000438107 IFITM10A6NMD0 228 aa16.32■□□□□ 0.2
FAM239A-202ENST00000438107 C21orf140B9A014 251 aa16.32■□□□□ 0.2
FAM239A-202ENST00000438107 HIST1H2BKO60814 126 aa16.32■□□□□ 0.2
FAM239A-202ENST00000438107 HIST1H2BJP06899 126 aa16.32■□□□□ 0.2
FAM239A-202ENST00000438107 HIST1H2BOP23527 126 aa16.32■□□□□ 0.2
FAM239A-202ENST00000438107 HIST1H2BBP33778 126 aa16.32■□□□□ 0.2
FAM239A-202ENST00000438107 HIST1H2BDP58876 126 aa16.32■□□□□ 0.2
FAM239A-202ENST00000438107 HIST1H2BCP62807 126 aa16.32■□□□□ 0.2
FAM239A-202ENST00000438107 HIST2H2BEQ16778 126 aa16.32■□□□□ 0.2
FAM239A-202ENST00000438107 HIST2H2BFQ5QNW6 126 aaPredicted RBP16.32■□□□□ 0.2
FAM239A-202ENST00000438107 LCN15Q6UWW0 184 aa16.32■□□□□ 0.2
FAM239A-202ENST00000438107 HIST1H2BHQ93079 126 aa16.32■□□□□ 0.2
FAM239A-202ENST00000438107 HIST1H2BNQ99877 126 aa16.32■□□□□ 0.2
FAM239A-202ENST00000438107 HIST1H2BMQ99879 126 aa16.32■□□□□ 0.2
FAM239A-202ENST00000438107 KCNS2Q9ULS6 477 aa16.32■□□□□ 0.2
FAM239A-202ENST00000438107 SIRPB1O00241 398 aa16.31■□□□□ 0.2
FAM239A-202ENST00000438107 MT-CO3P00414 261 aa16.31■□□□□ 0.2
FAM239A-202ENST00000438107 ZNF883P0CG24 379 aa16.31■□□□□ 0.2
FAM239A-202ENST00000438107 MDP1Q86V88 176 aa16.31■□□□□ 0.2
FAM239A-202ENST00000438107 TMEM105Q8N8V8 129 aa16.31■□□□□ 0.2
FAM239A-202ENST00000438107 EDARADDQ8WWZ3 215 aa16.31■□□□□ 0.2
FAM239A-202ENST00000438107 ZNF407Q9C0G0 2248 aa16.31■□□□□ 0.2
FAM239A-202ENST00000438107 ZNF146Q15072 292 aa16.31■□□□□ 0.2
FAM239A-202ENST00000438107 TBC1D28Q2M2D7 210 aa16.31■□□□□ 0.2
FAM239A-202ENST00000438107 DCAF10Q5QP82 559 aa16.31■□□□□ 0.2
FAM239A-202ENST00000438107 FBXW9Q5XUX1 488 aa16.31■□□□□ 0.2
FAM239A-202ENST00000438107 DRAM1Q8N682 238 aa16.31■□□□□ 0.2
FAM239A-202ENST00000438107 SCCPDHQ8NBX0 429 aa16.31■□□□□ 0.2
FAM239A-202ENST00000438107 ZBTB34Q8NCN2 500 aa16.31■□□□□ 0.2
FAM239A-202ENST00000438107 FAM210BQ96KR6 192 aa16.31■□□□□ 0.2
FAM239A-202ENST00000438107 CTDSP1Q9GZU7 261 aa16.31■□□□□ 0.2
FAM239A-202ENST00000438107 OR51B6Q9H340 312 aa16.31■□□□□ 0.2
FAM239A-202ENST00000438107 KLF13Q9Y2Y9 288 aaPredicted RBP16.31■□□□□ 0.2
FAM239A-202ENST00000438107 ZNF16P17020 682 aaPredicted RBP16.3■□□□□ 0.2
FAM239A-202ENST00000438107 CENPVQ7Z7K6 275 aaPredicted RBP16.3■□□□□ 0.2
FAM239A-202ENST00000438107 WDR86Q86TI4 376 aa16.3■□□□□ 0.2
FAM239A-202ENST00000438107 OR4C12Q96R67 309 aa16.3■□□□□ 0.2
FAM239A-202ENST00000438107 PLA2G3Q9NZ20 509 aa16.3■□□□□ 0.2
FAM239A-202ENST00000438107 TRAV20A0A0B4J274 112 aa16.3■□□□□ 0.2
FAM239A-202ENST00000438107 C3orf80F5H4A9 247 aa16.3■□□□□ 0.2
FAM239A-202ENST00000438107 SH2D1BO14796 132 aa16.3■□□□□ 0.2
FAM239A-202ENST00000438107 TRGC2P03986 189 aa16.3■□□□□ 0.2
FAM239A-202ENST00000438107 PGA5P0DJD9 388 aa16.3■□□□□ 0.2
FAM239A-202ENST00000438107 SPINK2P20155 84 aa16.3■□□□□ 0.2
FAM239A-202ENST00000438107 TMEM14EPQ6UXP3 125 aa16.3■□□□□ 0.2
FAM239A-202ENST00000438107 SSX7Q7RTT5 188 aa16.3■□□□□ 0.2
FAM239A-202ENST00000438107 PRR18Q8N4B5 295 aa16.3■□□□□ 0.2
FAM239A-202ENST00000438107 TAF15Q92804 592 aaKnown RBP eCLIP16.3■□□□□ 0.2
FAM239A-202ENST00000438107 BCL2L14Q9BZR8 327 aa16.3■□□□□ 0.2
FAM239A-202ENST00000438107 ZMAT5Q9UDW3 170 aaKnown RBP16.3■□□□□ 0.2
FAM239A-202ENST00000438107 TRAV39A0A0B4J263 110 aa16.29■□□□□ 0.2
FAM239A-202ENST00000438107 MAP1LC3B2A6NCE7 125 aa16.29■□□□□ 0.2
FAM239A-202ENST00000438107 CEACAM6P40199 344 aa16.29■□□□□ 0.2
FAM239A-202ENST00000438107 MEOX1P50221 254 aa16.29■□□□□ 0.2
FAM239A-202ENST00000438107 NKX6-1P78426 367 aaPredicted RBP16.29■□□□□ 0.2
FAM239A-202ENST00000438107 SPANXN5Q5MJ07 72 aa16.29■□□□□ 0.2
FAM239A-202ENST00000438107 FGFRL1Q8N441 504 aa16.29■□□□□ 0.2
FAM239A-202ENST00000438107 MAP1LC3BQ9GZQ8 125 aa16.29■□□□□ 0.2
FAM239A-202ENST00000438107 C12orf49Q9H741 205 aa16.29■□□□□ 0.2
FAM239A-202ENST00000438107 TRBV24-1A0A075B6N3 115 aa16.28■□□□□ 0.2
FAM239A-202ENST00000438107 KLRC4-KLRK1H3BQV0 150 aa16.28■□□□□ 0.2
FAM239A-202ENST00000438107 ATXN7O15265 892 aaPredicted RBP16.28■□□□□ 0.2
FAM239A-202ENST00000438107 WDR1O75083 606 aa16.28■□□□□ 0.2
FAM239A-202ENST00000438107 NDUFS6O75380 124 aaKnown RBP16.28■□□□□ 0.2
FAM239A-202ENST00000438107 OPN1MWP04001 364 aa16.28■□□□□ 0.2
FAM239A-202ENST00000438107 SP1P08047 785 aa16.28■□□□□ 0.2
FAM239A-202ENST00000438107 OPN1MW2P0DN77 364 aa16.28■□□□□ 0.2
FAM239A-202ENST00000438107 OPN1MW3P0DN78 364 aa16.28■□□□□ 0.2
FAM239A-202ENST00000438107 FGF8P55075 233 aaPredicted RBP16.28■□□□□ 0.2
FAM239A-202ENST00000438107 SLC38A11Q08AI6 406 aa16.28■□□□□ 0.2
FAM239A-202ENST00000438107 C3AR1Q16581 482 aa16.28■□□□□ 0.2
FAM239A-202ENST00000438107 PYY3Q5JQD4 70 aa16.28■□□□□ 0.2
FAM239A-202ENST00000438107 FAM209BQ5JX69 171 aa16.28■□□□□ 0.2
FAM239A-202ENST00000438107 SPATA46Q5T0L3 261 aa16.28■□□□□ 0.2
FAM239A-202ENST00000438107 SPNS3Q6ZMD2 512 aa16.28■□□□□ 0.2
FAM239A-202ENST00000438107 LINC00696Q6ZRV3 163 aa16.28■□□□□ 0.2
FAM239A-202ENST00000438107 AGMATQ9BSE5 352 aa16.28■□□□□ 0.2
FAM239A-202ENST00000438107 FOXJ2Q9P0K8 574 aa16.28■□□□□ 0.2
FAM239A-202ENST00000438107 BDP1A6H8Y1 2624 aa16.28■□□□□ 0.2
FAM239A-202ENST00000438107 MRPL49Q13405 166 aaKnown RBP16.28■□□□□ 0.2
FAM239A-202ENST00000438107 ATP6V1FQ16864 119 aa16.28■□□□□ 0.2
FAM239A-202ENST00000438107 MED12LQ86YW9 2145 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms