RNA–Protein interactions for RNA: ENST00000437737.3

LINC01088-201, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 5 BASIC

Gene LINC01088, Length 973 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-201ENST00000437737 TMEM104Q8NE00 496 aa11.14□□□□□ -0.63
LINC01088-201ENST00000437737 OR10K1Q8NGX5 313 aa11.14□□□□□ -0.63
LINC01088-201ENST00000437737 OR10R2Q8NGX6 335 aa11.14□□□□□ -0.63
LINC01088-201ENST00000437737 EMG1Q92979 244 aaKnown RBP11.14□□□□□ -0.63
LINC01088-201ENST00000437737 Q96M66 194 aa11.14□□□□□ -0.63
LINC01088-201ENST00000437737 RCHY1Q96PM5 261 aa11.14□□□□□ -0.63
LINC01088-201ENST00000437737 DUX3Q96PT4 197 aa11.14□□□□□ -0.63
LINC01088-201ENST00000437737 P2RX4Q99571 388 aa11.14□□□□□ -0.63
LINC01088-201ENST00000437737 SOSTQ9BQB4 213 aa11.14□□□□□ -0.63
LINC01088-201ENST00000437737 NRIP2Q9BQI9 281 aa11.14□□□□□ -0.63
LINC01088-201ENST00000437737 TMEM133Q9H2Q1 129 aa11.14□□□□□ -0.63
LINC01088-201ENST00000437737 BANF2Q9H503 90 aa11.14□□□□□ -0.63
LINC01088-201ENST00000437737 SPACA1Q9HBV2 294 aa11.14□□□□□ -0.63
LINC01088-201ENST00000437737 ST3GAL6Q9Y274 331 aa11.14□□□□□ -0.63
LINC01088-201ENST00000437737 hADV38S2A0JD32 116 aa11.13□□□□□ -0.63
LINC01088-201ENST00000437737 M0QZK8 103 aa11.13□□□□□ -0.63
LINC01088-201ENST00000437737 SH2D1BO14796 132 aa11.13□□□□□ -0.63
LINC01088-201ENST00000437737 CTDSPLO15194 276 aa11.13□□□□□ -0.63
LINC01088-201ENST00000437737 AMY1AP04745 511 aa11.13□□□□□ -0.63
LINC01088-201ENST00000437737 AMY2AP04746 511 aa11.13□□□□□ -0.63
LINC01088-201ENST00000437737 PRKACAP17612 351 aa11.13□□□□□ -0.63
LINC01088-201ENST00000437737 CHATP28329 748 aa11.13□□□□□ -0.63
LINC01088-201ENST00000437737 NPBWR2P48146 333 aa11.13□□□□□ -0.63
LINC01088-201ENST00000437737 VEGFCP49767 419 aa11.13□□□□□ -0.63
LINC01088-201ENST00000437737 RBM11P57052 281 aaKnown RBP11.13□□□□□ -0.63
LINC01088-201ENST00000437737 PYDC2Q56P42 97 aa11.13□□□□□ -0.63
LINC01088-201ENST00000437737 TCF23Q7RTU1 214 aa11.13□□□□□ -0.63
LINC01088-201ENST00000437737 MFSD4AQ8N468 514 aa11.13□□□□□ -0.63
LINC01088-201ENST00000437737 OR4P4Q8NGL7 312 aa11.13□□□□□ -0.63
LINC01088-201ENST00000437737 NEDD4LQ96PU5 975 aa11.13□□□□□ -0.63
LINC01088-201ENST00000437737 CCDC32Q9BV29 185 aa11.13□□□□□ -0.63
LINC01088-201ENST00000437737 SEBOXQ9HB31 216 aaPredicted RBP11.13□□□□□ -0.63
LINC01088-201ENST00000437737 ZFP57Q9NU63 452 aa11.13□□□□□ -0.63
LINC01088-201ENST00000437737 DPM3Q9P2X0 92 aa11.13□□□□□ -0.63
LINC01088-201ENST00000437737 MRPS7Q9Y2R9 242 aaKnown RBP11.13□□□□□ -0.63
LINC01088-201ENST00000437737 V9GYH0 126 aa11.13□□□□□ -0.63
LINC01088-201ENST00000437737 TRAV18A0A075B6X5 111 aa11.12□□□□□ -0.63
LINC01088-201ENST00000437737 RAB27BO00194 218 aa11.12□□□□□ -0.63
LINC01088-201ENST00000437737 GLAP06280 429 aa11.12□□□□□ -0.63
LINC01088-201ENST00000437737 GSTP1P09211 210 aaKnown RBP11.12□□□□□ -0.63
LINC01088-201ENST00000437737 BLVRBP30043 206 aaPredicted RBP11.12□□□□□ -0.63
LINC01088-201ENST00000437737 TAS2R20P59543 309 aa11.12□□□□□ -0.63
LINC01088-201ENST00000437737 MEF2CQ06413 473 aaPredicted RBP11.12□□□□□ -0.63
LINC01088-201ENST00000437737 C9orf66Q5T8R8 295 aa11.12□□□□□ -0.63
LINC01088-201ENST00000437737 OR8H2Q8N162 312 aa11.12□□□□□ -0.63
LINC01088-201ENST00000437737 CHST4Q8NCG5 386 aa11.12□□□□□ -0.63
LINC01088-201ENST00000437737 BORCS5Q969J3 196 aa11.12□□□□□ -0.63
LINC01088-201ENST00000437737 RAB3CQ96E17 227 aa11.12□□□□□ -0.63
LINC01088-201ENST00000437737 KCNK15Q9H427 330 aa11.12□□□□□ -0.63
LINC01088-201ENST00000437737 HES4Q9HCC6 221 aa11.12□□□□□ -0.63
LINC01088-201ENST00000437737 PLEKHJ1Q9NW61 149 aa11.12□□□□□ -0.63
LINC01088-201ENST00000437737 RBFOX1Q9NWB1 397 aaKnown RBP11.12□□□□□ -0.63
LINC01088-201ENST00000437737 HSF4Q9ULV5 492 aa11.12□□□□□ -0.63
LINC01088-201ENST00000437737 LYSTQ99698 3801 aa11.11□□□□□ -0.63
LINC01088-201ENST00000437737 A0A1W2PP11 408 aa11.11□□□□□ -0.63
LINC01088-201ENST00000437737 SERPINE3A8MV23 424 aa11.11□□□□□ -0.63
LINC01088-201ENST00000437737 SULT1C2O00338 296 aa11.11□□□□□ -0.63
LINC01088-201ENST00000437737 ZNF737O75373 536 aa11.11□□□□□ -0.63
LINC01088-201ENST00000437737 FUT3P21217 361 aa11.11□□□□□ -0.63
LINC01088-201ENST00000437737 GABRR1P24046 479 aa11.11□□□□□ -0.63
LINC01088-201ENST00000437737 PRSS3P35030 304 aa11.11□□□□□ -0.63
LINC01088-201ENST00000437737 PLA2G7Q13093 441 aa11.11□□□□□ -0.63
LINC01088-201ENST00000437737 RBM39Q14498 530 aaKnown RBP11.11□□□□□ -0.63
LINC01088-201ENST00000437737 ZNF146Q15072 292 aa11.11□□□□□ -0.63
LINC01088-201ENST00000437737 PNLIPRP3Q17RR3 467 aa11.11□□□□□ -0.63
LINC01088-201ENST00000437737 CDNFQ49AH0 187 aa11.11□□□□□ -0.63
LINC01088-201ENST00000437737 ZFAND6Q6FIF0 208 aa11.11□□□□□ -0.63
LINC01088-201ENST00000437737 ZNF695Q8IW36 515 aa11.11□□□□□ -0.63
LINC01088-201ENST00000437737 TPRX1Q8N7U7 411 aa11.11□□□□□ -0.63
LINC01088-201ENST00000437737 OR5M8Q8NGP6 311 aa11.11□□□□□ -0.63
LINC01088-201ENST00000437737 ZNF596Q8TC21 504 aa11.11□□□□□ -0.63
LINC01088-201ENST00000437737 CHPT1Q8WUD6 406 aa11.11□□□□□ -0.63
LINC01088-201ENST00000437737 FCAMRQ8WWV6 532 aa11.11□□□□□ -0.63
LINC01088-201ENST00000437737 NOL4LQ96MY1 436 aaPredicted RBP11.11□□□□□ -0.63
LINC01088-201ENST00000437737 IFT22Q9H7X7 185 aa11.11□□□□□ -0.63
LINC01088-201ENST00000437737 SCPEP1Q9HB40 452 aa11.11□□□□□ -0.63
LINC01088-201ENST00000437737 LINC00312Q9Y6C7 94 aa11.11□□□□□ -0.63
LINC01088-201ENST00000437737 LEUTXA8MZ59 168 aa11.1□□□□□ -0.63
LINC01088-201ENST00000437737 CCL24O00175 119 aa11.1□□□□□ -0.63
LINC01088-201ENST00000437737 GEMIN2O14893 280 aaKnown RBP11.1□□□□□ -0.63
LINC01088-201ENST00000437737 DEGS1O15121 323 aa11.1□□□□□ -0.63
LINC01088-201ENST00000437737 GSTZ1O43708 216 aaPredicted RBP11.1□□□□□ -0.63
LINC01088-201ENST00000437737 PDCD6O75340 191 aa11.1□□□□□ -0.63
LINC01088-201ENST00000437737 CA11O75493 328 aa11.1□□□□□ -0.63
LINC01088-201ENST00000437737 OR7C1O76099 320 aaPredicted RBP11.1□□□□□ -0.63
LINC01088-201ENST00000437737 HLA-DQB1P01920 261 aa11.1□□□□□ -0.63
LINC01088-201ENST00000437737 SNRNP70P08621 437 aaKnown RBP11.1□□□□□ -0.63
LINC01088-201ENST00000437737 SLC35B1P78383 322 aa11.1□□□□□ -0.63
LINC01088-201ENST00000437737 MRPS15P82914 257 aaKnown RBP11.1□□□□□ -0.63
LINC01088-201ENST00000437737 HACD4Q5VWC8 232 aa11.1□□□□□ -0.63
LINC01088-201ENST00000437737 TRAPPC6BQ86SZ2 158 aa11.1□□□□□ -0.63
LINC01088-201ENST00000437737 ABHD12Q8N2K0 398 aa11.1□□□□□ -0.63
LINC01088-201ENST00000437737 Q8N402 240 aa11.1□□□□□ -0.63
LINC01088-201ENST00000437737 RAX2Q96IS3 184 aa11.1□□□□□ -0.63
LINC01088-201ENST00000437737 NICN1Q9BSH3 213 aa11.1□□□□□ -0.63
LINC01088-201ENST00000437737 SRRQ9GZT4 340 aa11.1□□□□□ -0.63
LINC01088-201ENST00000437737 AUNIPQ9H7T9 357 aa11.1□□□□□ -0.63
LINC01088-201ENST00000437737 ZNF256Q9Y2P7 627 aaPredicted RBP11.1□□□□□ -0.63
LINC01088-201ENST00000437737 MOB4Q9Y3A3 225 aa11.1□□□□□ -0.63
LINC01088-201ENST00000437737 SMAD5-AS1Q9Y6J3 95 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms