RNA–Protein interactions for RNA: ENST00000435532.7

NEDD4-202, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD4, Length 5,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-202ENST00000435532 PNKDQ8N490 385 aa13.43□□□□□ -0.26
NEDD4-202ENST00000435532 PCNPQ8WW12 178 aaKnown RBP13.43□□□□□ -0.26
NEDD4-202ENST00000435532 MMP24Q9Y5R2 645 aa13.43□□□□□ -0.26
NEDD4-202ENST00000435532 NKX2-6A6NCS4 301 aa13.43□□□□□ -0.26
NEDD4-202ENST00000435532 OR2J3O76001 311 aa13.43□□□□□ -0.26
NEDD4-202ENST00000435532 MMP7P09237 267 aaPredicted RBP13.43□□□□□ -0.26
NEDD4-202ENST00000435532 IGHV2OR16-5A0A0B4J2B6 119 aa13.43□□□□□ -0.26
NEDD4-202ENST00000435532 BATFQ16520 125 aa13.43□□□□□ -0.26
NEDD4-202ENST00000435532 FAM206AQ9NX38 181 aa13.43□□□□□ -0.26
NEDD4-202ENST00000435532 IL18BPO95998 194 aa13.42□□□□□ -0.26
NEDD4-202ENST00000435532 APELAP0DMC3 54 aa13.42□□□□□ -0.26
NEDD4-202ENST00000435532 DYNLT3P51808 116 aa13.42□□□□□ -0.26
NEDD4-202ENST00000435532 MANBALQ9NQG1 85 aa13.42□□□□□ -0.26
NEDD4-202ENST00000435532 YTHDF2Q9Y5A9 579 aaKnown RBP13.42□□□□□ -0.26
NEDD4-202ENST00000435532 LSM11P83369 360 aaKnown RBP eCLIP13.42□□□□□ -0.26
NEDD4-202ENST00000435532 DNM1P46Q6ZS02 220 aa13.42□□□□□ -0.26
NEDD4-202ENST00000435532 OR5P3Q8WZ94 311 aa13.42□□□□□ -0.26
NEDD4-202ENST00000435532 TRAV30A0A087WSZ9 112 aa13.42□□□□□ -0.26
NEDD4-202ENST00000435532 GATCO43716 136 aaKnown RBP13.42□□□□□ -0.26
NEDD4-202ENST00000435532 RPL35P42766 123 aaKnown RBP13.42□□□□□ -0.26
NEDD4-202ENST00000435532 IRF3Q14653 427 aa13.42□□□□□ -0.26
NEDD4-202ENST00000435532 TEPPQ6URK8 271 aa13.42□□□□□ -0.26
NEDD4-202ENST00000435532 FA2HQ7L5A8 372 aa13.42□□□□□ -0.26
NEDD4-202ENST00000435532 ABHD1Q96SE0 405 aa13.42□□□□□ -0.26
NEDD4-202ENST00000435532 IGHV3-72A0A0B4J1Y9 119 aa13.42□□□□□ -0.26
NEDD4-202ENST00000435532 TGFAP01135 160 aa13.42□□□□□ -0.26
NEDD4-202ENST00000435532 IGHV1-2P23083 117 aa13.42□□□□□ -0.26
NEDD4-202ENST00000435532 RPL8P62917 257 aaKnown RBP13.42□□□□□ -0.26
NEDD4-202ENST00000435532 ELOVL1Q9BW60 279 aa13.42□□□□□ -0.26
NEDD4-202ENST00000435532 LHX2P50458 406 aa13.42□□□□□ -0.26
NEDD4-202ENST00000435532 CLDN18P56856 261 aa13.42□□□□□ -0.26
NEDD4-202ENST00000435532 PLSCR3Q9NRY6 295 aa13.42□□□□□ -0.26
NEDD4-202ENST00000435532 MRPL22Q9NWU5 206 aaKnown RBP13.42□□□□□ -0.26
NEDD4-202ENST00000435532 DLL3Q9NYJ7 618 aa13.42□□□□□ -0.26
NEDD4-202ENST00000435532 OR2T8A6NH00 312 aa13.41□□□□□ -0.26
NEDD4-202ENST00000435532 TRIM77I1YAP6 450 aa13.41□□□□□ -0.26
NEDD4-202ENST00000435532 MPC2O95563 127 aa13.41□□□□□ -0.26
NEDD4-202ENST00000435532 NANOS3P60323 173 aaKnown RBP13.41□□□□□ -0.26
NEDD4-202ENST00000435532 SMAGPQ0VAQ4 97 aa13.41□□□□□ -0.26
NEDD4-202ENST00000435532 CADM3Q8N126 398 aa13.41□□□□□ -0.26
NEDD4-202ENST00000435532 TRBV5-5A0A0J9YX44 114 aa13.41□□□□□ -0.26
NEDD4-202ENST00000435532 BTN1A1Q13410 526 aa13.41□□□□□ -0.26
NEDD4-202ENST00000435532 BMPR1BO00238 502 aa13.41□□□□□ -0.26
NEDD4-202ENST00000435532 ZNF737O75373 536 aa13.41□□□□□ -0.26
NEDD4-202ENST00000435532 LCN2P80188 198 aa13.41□□□□□ -0.26
NEDD4-202ENST00000435532 FABP9Q0Z7S8 132 aa13.41□□□□□ -0.26
NEDD4-202ENST00000435532 SLC24A4Q8NFF2 622 aa13.41□□□□□ -0.26
NEDD4-202ENST00000435532 MFAP4P55083 255 aa13.4□□□□□ -0.26
NEDD4-202ENST00000435532 TMEM50BP56557 158 aa13.4□□□□□ -0.26
NEDD4-202ENST00000435532 ANKRD55Q3KP44 614 aa13.4□□□□□ -0.26
NEDD4-202ENST00000435532 U3KQ87 197 aa13.4□□□□□ -0.26
NEDD4-202ENST00000435532 DGAT2L7PQ6IED9 249 aa13.4□□□□□ -0.26
NEDD4-202ENST00000435532 EEF1AKMT3Q96AZ1 226 aa13.4□□□□□ -0.26
NEDD4-202ENST00000435532 TM4SF5O14894 197 aa13.4□□□□□ -0.26
NEDD4-202ENST00000435532 CEBPDP49716 269 aaPredicted RBP13.4□□□□□ -0.26
NEDD4-202ENST00000435532 SULT1A1P50225 295 aa13.4□□□□□ -0.26
NEDD4-202ENST00000435532 LURAP1Q96LR2 239 aa13.4□□□□□ -0.26
NEDD4-202ENST00000435532 ZNF646O15015 1829 aaPredicted RBP13.4□□□□□ -0.26
NEDD4-202ENST00000435532 KNTC1P50748 2209 aa13.4□□□□□ -0.26
NEDD4-202ENST00000435532 HTN1P15515 57 aa13.4□□□□□ -0.26
NEDD4-202ENST00000435532 USF1P22415 310 aaPredicted RBP13.4□□□□□ -0.26
NEDD4-202ENST00000435532 OR4P4Q8NGL7 312 aa13.4□□□□□ -0.26
NEDD4-202ENST00000435532 OR4C13Q8NGP0 309 aa13.4□□□□□ -0.26
NEDD4-202ENST00000435532 C7orf69Q9H7B7 122 aa13.4□□□□□ -0.26
NEDD4-202ENST00000435532 AUP1Q9Y679 476 aa13.4□□□□□ -0.26
NEDD4-202ENST00000435532 TET1Q8NFU7 2136 aa13.4□□□□□ -0.27
NEDD4-202ENST00000435532 IGHV3OR16-10A0A075B7F0 116 aa13.39□□□□□ -0.27
NEDD4-202ENST00000435532 HYPMO75409 117 aa13.39□□□□□ -0.27
NEDD4-202ENST00000435532 PPOXP50336 477 aa13.39□□□□□ -0.27
NEDD4-202ENST00000435532 KLF9Q13886 244 aaPredicted RBP13.39□□□□□ -0.27
NEDD4-202ENST00000435532 RRN3P1Q2M238 152 aa13.39□□□□□ -0.27
NEDD4-202ENST00000435532 OR4X2Q8NGF9 303 aa13.39□□□□□ -0.27
NEDD4-202ENST00000435532 CNTRLQ7Z7A1 2325 aa13.39□□□□□ -0.27
NEDD4-202ENST00000435532 hCG_38984A0A1B0GV85 526 aa13.39□□□□□ -0.27
NEDD4-202ENST00000435532 ZNHIT1O43257 154 aa13.39□□□□□ -0.27
NEDD4-202ENST00000435532 KCNAB3O43448 404 aa13.39□□□□□ -0.27
NEDD4-202ENST00000435532 RAB5AP20339 215 aa13.39□□□□□ -0.27
NEDD4-202ENST00000435532 SLC6A1P30531 599 aa13.39□□□□□ -0.27
NEDD4-202ENST00000435532 SLC7A5P1Q8MH63 180 aa13.39□□□□□ -0.27
NEDD4-202ENST00000435532 ST6GALNAC3Q8NDV1 305 aa13.39□□□□□ -0.27
NEDD4-202ENST00000435532 OR10J6PQ8NGY7 276 aa13.39□□□□□ -0.27
NEDD4-202ENST00000435532 SNRNP40Q96DI7 357 aaKnown RBP13.39□□□□□ -0.27
NEDD4-202ENST00000435532 SCN5AQ14524 2016 aa13.39□□□□□ -0.27
NEDD4-202ENST00000435532 H0Y980 276 aa13.39□□□□□ -0.27
NEDD4-202ENST00000435532 TIMP3P35625 211 aa13.39□□□□□ -0.27
NEDD4-202ENST00000435532 GAMTQ14353 236 aa13.39□□□□□ -0.27
NEDD4-202ENST00000435532 FAM78BQ5VT40 261 aa13.39□□□□□ -0.27
NEDD4-202ENST00000435532 ABLIM2Q6H8Q1 611 aa13.39□□□□□ -0.27
NEDD4-202ENST00000435532 OR52M1Q8NGK5 317 aa13.39□□□□□ -0.27
NEDD4-202ENST00000435532 RAX2Q96IS3 184 aa13.39□□□□□ -0.27
NEDD4-202ENST00000435532 HDHD3Q9BSH5 251 aaPredicted RBP13.39□□□□□ -0.27
NEDD4-202ENST00000435532 HIST1H1BP16401 226 aaKnown RBP13.39□□□□□ -0.27
NEDD4-202ENST00000435532 RELQ04864 619 aaPredicted RBP13.39□□□□□ -0.27
NEDD4-202ENST00000435532 MIDNQ504T8 468 aa13.39□□□□□ -0.27
NEDD4-202ENST00000435532 FAM90A1Q86YD7 464 aa13.39□□□□□ -0.27
NEDD4-202ENST00000435532 METRNQ9UJH8 293 aa13.39□□□□□ -0.27
NEDD4-202ENST00000435532 TRIOBPQ9H2D6 2365 aa13.39□□□□□ -0.27
NEDD4-202ENST00000435532 GNLYP22749 145 aa13.39□□□□□ -0.27
NEDD4-202ENST00000435532 SPCS3P61009 180 aa13.39□□□□□ -0.27
NEDD4-202ENST00000435532 C20orf204Q6ZNR8 217 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms