RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 CHODLQ9H9P2 273 aa11.07□□□□□ -0.64
PTCH1-207ENST00000429896 TRBV5-5A0A0J9YX44 114 aa11.06□□□□□ -0.64
PTCH1-207ENST00000429896 ERVFRD-1P60508 538 aa11.06□□□□□ -0.64
PTCH1-207ENST00000429896 MRPL24Q96A35 216 aaKnown RBP11.06□□□□□ -0.64
PTCH1-207ENST00000429896 C1QTNF5Q9BXJ0 243 aa11.06□□□□□ -0.64
PTCH1-207ENST00000429896 AESQ08117 197 aa11.06□□□□□ -0.64
PTCH1-207ENST00000429896 LYG2Q86SG7 212 aa11.06□□□□□ -0.64
PTCH1-207ENST00000429896 MYPOPQ86VE0 399 aaPredicted RBP11.06□□□□□ -0.64
PTCH1-207ENST00000429896 KLHDC3Q9BQ90 382 aa11.06□□□□□ -0.64
PTCH1-207ENST00000429896 SCN2AQ99250 2005 aa11.06□□□□□ -0.64
PTCH1-207ENST00000429896 OR5P3Q8WZ94 311 aa11.06□□□□□ -0.64
PTCH1-207ENST00000429896 FAM168AQ92567 244 aa11.06□□□□□ -0.64
PTCH1-207ENST00000429896 LINC00052Q96N35 136 aa11.06□□□□□ -0.64
PTCH1-207ENST00000429896 SLC2A9Q9NRM0 540 aa11.06□□□□□ -0.64
PTCH1-207ENST00000429896 MGST3O14880 152 aa11.06□□□□□ -0.64
PTCH1-207ENST00000429896 CSN3P07498 182 aa11.06□□□□□ -0.64
PTCH1-207ENST00000429896 KIR2DS2P43631 304 aa11.06□□□□□ -0.64
PTCH1-207ENST00000429896 LAIR2Q6ISS4 152 aa11.06□□□□□ -0.64
PTCH1-207ENST00000429896 C2orf50Q96LR7 162 aa11.06□□□□□ -0.64
PTCH1-207ENST00000429896 ZNF714Q96N38 554 aa11.06□□□□□ -0.64
PTCH1-207ENST00000429896 RNF2Q99496 336 aa11.06□□□□□ -0.64
PTCH1-207ENST00000429896 RAB18Q9NP72 206 aa11.06□□□□□ -0.64
PTCH1-207ENST00000429896 TRAPPC1Q9Y5R8 145 aa11.06□□□□□ -0.64
PTCH1-207ENST00000429896 SNCGO76070 127 aa11.06□□□□□ -0.64
PTCH1-207ENST00000429896 DAOP14920 347 aa11.06□□□□□ -0.64
PTCH1-207ENST00000429896 LINC00303Q3SY05 128 aa11.06□□□□□ -0.64
PTCH1-207ENST00000429896 ARRDC1Q8N5I2 433 aa11.06□□□□□ -0.64
PTCH1-207ENST00000429896 MEGF10Q96KG7 1140 aa11.06□□□□□ -0.64
PTCH1-207ENST00000429896 SPRY4Q9C004 299 aa11.06□□□□□ -0.64
PTCH1-207ENST00000429896 RALGAPA1Q6GYQ0 2036 aa11.06□□□□□ -0.64
PTCH1-207ENST00000429896 SOCS1O15524 211 aa11.06□□□□□ -0.64
PTCH1-207ENST00000429896 SYNGR1O43759 233 aa11.06□□□□□ -0.64
PTCH1-207ENST00000429896 VSIG8P0DPA2 414 aa11.06□□□□□ -0.64
PTCH1-207ENST00000429896 CDKN1AP38936 164 aa11.06□□□□□ -0.64
PTCH1-207ENST00000429896 MPV17P39210 176 aa11.06□□□□□ -0.64
PTCH1-207ENST00000429896 FGF12P61328 243 aa11.06□□□□□ -0.64
PTCH1-207ENST00000429896 PAX5Q02548 391 aa11.06□□□□□ -0.64
PTCH1-207ENST00000429896 CST4P01036 141 aa11.05□□□□□ -0.64
PTCH1-207ENST00000429896 OR4A4PQ8NGN8 299 aa11.05□□□□□ -0.64
PTCH1-207ENST00000429896 PROK2Q9HC23 129 aa11.05□□□□□ -0.64
PTCH1-207ENST00000429896 SNRPGP15A8MWD9 76 aa11.05□□□□□ -0.64
PTCH1-207ENST00000429896 CD1BP29016 333 aa11.05□□□□□ -0.64
PTCH1-207ENST00000429896 LILRB1Q8NHL6 650 aaPredicted RBP11.05□□□□□ -0.64
PTCH1-207ENST00000429896 GNPNAT1Q96EK6 184 aaPredicted RBP11.05□□□□□ -0.64
PTCH1-207ENST00000429896 MGPP08493 103 aa11.05□□□□□ -0.64
PTCH1-207ENST00000429896 CD200P41217 278 aa11.05□□□□□ -0.64
PTCH1-207ENST00000429896 TMEM91Q6ZNR0 172 aa11.05□□□□□ -0.64
PTCH1-207ENST00000429896 LFNGQ8NES3 379 aa11.05□□□□□ -0.64
PTCH1-207ENST00000429896 FLYWCH2Q96CP2 140 aaKnown RBP11.05□□□□□ -0.64
PTCH1-207ENST00000429896 SNX22Q96L94 193 aa11.05□□□□□ -0.64
PTCH1-207ENST00000429896 TMEM106BQ9NUM4 274 aa11.05□□□□□ -0.64
PTCH1-207ENST00000429896 MIXL1Q9H2W2 232 aa11.05□□□□□ -0.64
PTCH1-207ENST00000429896 ZNF586Q9NXT0 402 aa11.05□□□□□ -0.64
PTCH1-207ENST00000429896 SF3B6Q9Y3B4 125 aaKnown RBP11.05□□□□□ -0.64
PTCH1-207ENST00000429896 RIF1Q5UIP0 2472 aaKnown RBP11.05□□□□□ -0.64
PTCH1-207ENST00000429896 KIAA1324LA8MWY0 1029 aaPredicted RBP11.05□□□□□ -0.64
PTCH1-207ENST00000429896 MRPS11P82912 194 aaKnown RBP11.05□□□□□ -0.64
PTCH1-207ENST00000429896 CD300CQ08708 224 aa11.05□□□□□ -0.64
PTCH1-207ENST00000429896 FDX2Q6P4F2 183 aa11.05□□□□□ -0.64
PTCH1-207ENST00000429896 OR4F17Q8NGA8 305 aa11.05□□□□□ -0.64
PTCH1-207ENST00000429896 ASXL3Q9C0F0 2248 aa11.04□□□□□ -0.64
PTCH1-207ENST00000429896 LMX1BO60663 402 aa11.04□□□□□ -0.64
PTCH1-207ENST00000429896 CAMPP49913 170 aa11.04□□□□□ -0.64
PTCH1-207ENST00000429896 TMEM140Q9NV12 185 aa11.04□□□□□ -0.64
PTCH1-207ENST00000429896 ZMAT5Q9UDW3 170 aaKnown RBP11.04□□□□□ -0.64
PTCH1-207ENST00000429896 GOLGB1Q14789 3259 aaKnown RBP11.04□□□□□ -0.64
PTCH1-207ENST00000429896 NHLH2Q02577 135 aa11.04□□□□□ -0.64
PTCH1-207ENST00000429896 SAXO1Q8IYX7 474 aa11.04□□□□□ -0.64
PTCH1-207ENST00000429896 DUSP18Q8NEJ0 188 aa11.04□□□□□ -0.64
PTCH1-207ENST00000429896 TMEM37Q8WXS4 190 aa11.04□□□□□ -0.64
PTCH1-207ENST00000429896 WASHC3Q9Y3C0 194 aa11.04□□□□□ -0.64
PTCH1-207ENST00000429896 MAP1BP46821 2468 aaKnown RBP11.04□□□□□ -0.64
PTCH1-207ENST00000429896 IFITM3Q01628 133 aa11.04□□□□□ -0.64
PTCH1-207ENST00000429896 CACFD1Q9UGQ2 172 aa11.04□□□□□ -0.64
PTCH1-207ENST00000429896 FOXH1O75593 365 aa11.04□□□□□ -0.64
PTCH1-207ENST00000429896 OR2H2O95918 312 aa11.04□□□□□ -0.64
PTCH1-207ENST00000429896 IL36GQ9NZH8 169 aa11.04□□□□□ -0.64
PTCH1-207ENST00000429896 A0A087WV48 116 aa11.04□□□□□ -0.64
PTCH1-207ENST00000429896 TRAV39A0A0B4J263 110 aa11.04□□□□□ -0.64
PTCH1-207ENST00000429896 hCG_38984A0A1B0GV85 526 aa11.04□□□□□ -0.64
PTCH1-207ENST00000429896 OR5AL1P0C617 328 aa11.04□□□□□ -0.64
PTCH1-207ENST00000429896 MIDNQ504T8 468 aa11.04□□□□□ -0.64
PTCH1-207ENST00000429896 SLC35E4Q6ICL7 350 aa11.04□□□□□ -0.64
PTCH1-207ENST00000429896 IGFL2Q6UWQ7 119 aa11.04□□□□□ -0.64
PTCH1-207ENST00000429896 NEIL1Q96FI4 390 aaPredicted RBP11.04□□□□□ -0.64
PTCH1-207ENST00000429896 LOC105371242A0A075B767 164 aa11.03□□□□□ -0.64
PTCH1-207ENST00000429896 ARG1P05089 322 aa11.03□□□□□ -0.64
PTCH1-207ENST00000429896 SFTA3P0C7M3 94 aa11.03□□□□□ -0.64
PTCH1-207ENST00000429896 CD37P11049 281 aa11.03□□□□□ -0.64
PTCH1-207ENST00000429896 TFPI2P48307 235 aa11.03□□□□□ -0.64
PTCH1-207ENST00000429896 DKK4Q9UBT3 224 aa11.03□□□□□ -0.64
PTCH1-207ENST00000429896 C17orf100A8MU93 164 aa11.03□□□□□ -0.64
PTCH1-207ENST00000429896 TRIM77I1YAP6 450 aa11.03□□□□□ -0.64
PTCH1-207ENST00000429896 HRASP01112 189 aa11.03□□□□□ -0.64
PTCH1-207ENST00000429896 SP5Q6BEB4 398 aaPredicted RBP11.03□□□□□ -0.64
PTCH1-207ENST00000429896 ETV3LQ6ZN32 361 aa11.03□□□□□ -0.64
PTCH1-207ENST00000429896 GVQW1Q8N7I0 195 aa11.03□□□□□ -0.64
PTCH1-207ENST00000429896 ADTRPQ96IZ2 230 aa11.03□□□□□ -0.64
PTCH1-207ENST00000429896 MARVELD1Q9BSK0 173 aa11.03□□□□□ -0.64
PTCH1-207ENST00000429896 RHOFQ9HBH0 211 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms