RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 PMS2P11Q13670 270 aa7.41□□□□□ -1.22
GABPB1-205ENST00000429662 DAZAP2Q15038 168 aaPredicted RBP7.41□□□□□ -1.22
GABPB1-205ENST00000429662 CXorf66Q5JRM2 361 aaPredicted RBP7.41□□□□□ -1.22
GABPB1-205ENST00000429662 ZNF324BQ6AW86 544 aaPredicted RBP7.41□□□□□ -1.22
GABPB1-205ENST00000429662 HEPN1Q6WQI6 88 aa7.41□□□□□ -1.22
GABPB1-205ENST00000429662 Q6ZPA2 131 aa7.41□□□□□ -1.22
GABPB1-205ENST00000429662 FAM24BQ8N5W8 94 aa7.41□□□□□ -1.22
GABPB1-205ENST00000429662 ZFP62Q8NB50 900 aaPredicted RBP7.41□□□□□ -1.22
GABPB1-205ENST00000429662 LILRB1Q8NHL6 650 aaPredicted RBP7.41□□□□□ -1.22
GABPB1-205ENST00000429662 PLPPR1Q8TBJ4 325 aa7.41□□□□□ -1.22
GABPB1-205ENST00000429662 MRPL30Q8TCC3 161 aaKnown RBP7.41□□□□□ -1.22
GABPB1-205ENST00000429662 ABHD3Q8WU67 409 aa7.41□□□□□ -1.22
GABPB1-205ENST00000429662 OR5P3Q8WZ94 311 aa7.41□□□□□ -1.22
GABPB1-205ENST00000429662 APH1AQ96BI3 265 aa7.41□□□□□ -1.22
GABPB1-205ENST00000429662 PINX1Q96BK5 328 aaKnown RBP7.41□□□□□ -1.22
GABPB1-205ENST00000429662 MUCL1Q96DR8 90 aa7.41□□□□□ -1.22
GABPB1-205ENST00000429662 YPEL4Q96NS1 127 aa7.41□□□□□ -1.22
GABPB1-205ENST00000429662 P2RX4Q99571 388 aa7.41□□□□□ -1.22
GABPB1-205ENST00000429662 NIPSNAP3BQ9BS92 247 aa7.41□□□□□ -1.22
GABPB1-205ENST00000429662 OR51M1Q9H341 326 aa7.41□□□□□ -1.22
GABPB1-205ENST00000429662 CCL28Q9NRJ3 127 aa7.41□□□□□ -1.22
GABPB1-205ENST00000429662 TMEM242Q9NWH2 141 aa7.41□□□□□ -1.22
GABPB1-205ENST00000429662 LRFN1Q9P244 771 aa7.41□□□□□ -1.22
GABPB1-205ENST00000429662 MMP24Q9Y5R2 645 aa7.41□□□□□ -1.22
GABPB1-205ENST00000429662 PUS1Q9Y606 427 aaKnown RBP eCLIP7.41□□□□□ -1.22
GABPB1-205ENST00000429662 C5orf49A4QMS7 147 aa7.4□□□□□ -1.22
GABPB1-205ENST00000429662 CD300LBA8K4G0 201 aa7.4□□□□□ -1.22
GABPB1-205ENST00000429662 FAM90A26D6RGX4 464 aa7.4□□□□□ -1.22
GABPB1-205ENST00000429662 H3BQ15 152 aa7.4□□□□□ -1.22
GABPB1-205ENST00000429662 HSD17B6O14756 317 aa7.4□□□□□ -1.22
GABPB1-205ENST00000429662 ZNF205O95201 554 aa7.4□□□□□ -1.22
GABPB1-205ENST00000429662 F10P00742 488 aa7.4□□□□□ -1.22
GABPB1-205ENST00000429662 IFNA1P01562 189 aa7.4□□□□□ -1.22
GABPB1-205ENST00000429662 GLI4P10075 376 aa7.4□□□□□ -1.22
GABPB1-205ENST00000429662 AKR1C3P42330 323 aa7.4□□□□□ -1.22
GABPB1-205ENST00000429662 LHX2P50458 406 aa7.4□□□□□ -1.22
GABPB1-205ENST00000429662 CD81P60033 236 aa7.4□□□□□ -1.22
GABPB1-205ENST00000429662 RPS23P62266 143 aaKnown RBP7.4□□□□□ -1.22
GABPB1-205ENST00000429662 RPS18P62269 152 aaKnown RBP7.4□□□□□ -1.22
GABPB1-205ENST00000429662 HBG1P69891 147 aa7.4□□□□□ -1.22
GABPB1-205ENST00000429662 HBG2P69892 147 aa7.4□□□□□ -1.22
GABPB1-205ENST00000429662 ABHD17BQ5VST6 288 aa7.4□□□□□ -1.22
GABPB1-205ENST00000429662 SLC25A24Q6NUK1 477 aa7.4□□□□□ -1.22
GABPB1-205ENST00000429662 ADAM5Q6NVV9 412 aa7.4□□□□□ -1.22
GABPB1-205ENST00000429662 ETV3LQ6ZN32 361 aa7.4□□□□□ -1.22
GABPB1-205ENST00000429662 ZNF429Q86V71 674 aa7.4□□□□□ -1.22
GABPB1-205ENST00000429662 FAM58AQ8N1B3 248 aa7.4□□□□□ -1.22
GABPB1-205ENST00000429662 ZBTB34Q8NCN2 500 aa7.4□□□□□ -1.22
GABPB1-205ENST00000429662 OR2M7Q8NG81 312 aa7.4□□□□□ -1.22
GABPB1-205ENST00000429662 OR10V1Q8NGI7 309 aa7.4□□□□□ -1.22
GABPB1-205ENST00000429662 CLDND2Q8NHS1 167 aa7.4□□□□□ -1.22
GABPB1-205ENST00000429662 CT55Q8WUE5 264 aa7.4□□□□□ -1.22
GABPB1-205ENST00000429662 TMEM171Q8WVE6 324 aa7.4□□□□□ -1.22
GABPB1-205ENST00000429662 MBD3L1Q8WWY6 194 aa7.4□□□□□ -1.22
GABPB1-205ENST00000429662 ZNF845Q96IR2 970 aaPredicted RBP7.4□□□□□ -1.22
GABPB1-205ENST00000429662 POM121L2Q96KW2 1035 aa7.4□□□□□ -1.22
GABPB1-205ENST00000429662 SPOCK3Q9BQ16 436 aa7.4□□□□□ -1.22
GABPB1-205ENST00000429662 GPR87Q9BY21 358 aa7.4□□□□□ -1.22
GABPB1-205ENST00000429662 PRRG4Q9BZD6 226 aa7.4□□□□□ -1.22
GABPB1-205ENST00000429662 GP6Q9HCN6 339 aa7.4□□□□□ -1.22
GABPB1-205ENST00000429662 DEPPQ9NTK1 212 aa7.4□□□□□ -1.22
GABPB1-205ENST00000429662 CISD1Q9NZ45 108 aaKnown RBP7.4□□□□□ -1.22
GABPB1-205ENST00000429662 MTCH1Q9NZJ7 389 aa7.4□□□□□ -1.22
GABPB1-205ENST00000429662 LOXL2Q9Y4K0 774 aa7.4□□□□□ -1.22
GABPB1-205ENST00000429662 RNF115Q9Y4L5 304 aa7.4□□□□□ -1.22
GABPB1-205ENST00000429662 NCOA6Q14686 2063 aaPredicted RBP7.4□□□□□ -1.23
GABPB1-205ENST00000429662 LOC102723971A0A1B0GUV8 181 aa7.39□□□□□ -1.23
GABPB1-205ENST00000429662 A0A1W2PPE2 198 aa7.39□□□□□ -1.23
GABPB1-205ENST00000429662 C21orf140B9A014 251 aa7.39□□□□□ -1.23
GABPB1-205ENST00000429662 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.39□□□□□ -1.23
GABPB1-205ENST00000429662 J3QT63 122 aa7.39□□□□□ -1.23
GABPB1-205ENST00000429662 FABP1P07148 127 aa7.39□□□□□ -1.23
GABPB1-205ENST00000429662 HOXA5P20719 270 aa7.39□□□□□ -1.23
GABPB1-205ENST00000429662 GRNP28799 593 aaKnown RBP7.39□□□□□ -1.23
GABPB1-205ENST00000429662 GLIPR1P48060 266 aa7.39□□□□□ -1.23
GABPB1-205ENST00000429662 CLDN18P56856 261 aa7.39□□□□□ -1.23
GABPB1-205ENST00000429662 ICAM4Q14773 271 aa7.39□□□□□ -1.23
GABPB1-205ENST00000429662 HERPUD1Q15011 391 aa7.39□□□□□ -1.23
GABPB1-205ENST00000429662 PDCD1Q15116 288 aa7.39□□□□□ -1.23
GABPB1-205ENST00000429662 MSMO1Q15800 293 aa7.39□□□□□ -1.23
GABPB1-205ENST00000429662 DNLZQ5SXM8 178 aa7.39□□□□□ -1.23
GABPB1-205ENST00000429662 MCEMP1Q8IX19 187 aa7.39□□□□□ -1.23
GABPB1-205ENST00000429662 NAXEQ8NCW5 288 aa7.39□□□□□ -1.23
GABPB1-205ENST00000429662 RNASE11Q8TAA1 199 aaKnown RBP7.39□□□□□ -1.23
GABPB1-205ENST00000429662 NANPQ8TBE9 248 aa7.39□□□□□ -1.23
GABPB1-205ENST00000429662 ISOC2Q96AB3 205 aa7.39□□□□□ -1.23
GABPB1-205ENST00000429662 GPR146Q96CH1 333 aa7.39□□□□□ -1.23
GABPB1-205ENST00000429662 RAB39BQ96DA2 213 aa7.39□□□□□ -1.23
GABPB1-205ENST00000429662 RARRES2Q99969 163 aa7.39□□□□□ -1.23
GABPB1-205ENST00000429662 C20orf24Q9BUV8 137 aa7.39□□□□□ -1.23
GABPB1-205ENST00000429662 CTDSP1Q9GZU7 261 aa7.39□□□□□ -1.23
GABPB1-205ENST00000429662 MAGT1Q9H0U3 335 aa7.39□□□□□ -1.23
GABPB1-205ENST00000429662 ZNF703Q9H7S9 590 aaPredicted RBP7.39□□□□□ -1.23
GABPB1-205ENST00000429662 GLRX2Q9NS18 164 aa7.39□□□□□ -1.23
GABPB1-205ENST00000429662 LIN7CQ9NUP9 197 aaKnown RBP7.39□□□□□ -1.23
GABPB1-205ENST00000429662 POLDIP2Q9Y2S7 368 aa7.39□□□□□ -1.23
GABPB1-205ENST00000429662 TIMM9Q9Y5J7 89 aa7.39□□□□□ -1.23
GABPB1-205ENST00000429662 CCDC168Q8NDH2 2452 aa7.39□□□□□ -1.23
GABPB1-205ENST00000429662 ELOA3CA0A087WX78 387 aaPredicted RBP7.38□□□□□ -1.23
GABPB1-205ENST00000429662 IGKV1D-13A0A0B4J2D9 117 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms