RNA–Protein interactions for RNA: ENST00000429102.6

CDH3-202, Transcript of cadherin 3, humanhuman

TSL 1 (best) BASIC

Gene CDH3, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-202ENST00000429102 DECR2Q9NUI1 292 aa10.62□□□□□ -0.71
CDH3-202ENST00000429102 C10orf142B7Z368 130 aa10.62□□□□□ -0.71
CDH3-202ENST00000429102 SRPXP78539 464 aa10.62□□□□□ -0.71
CDH3-202ENST00000429102 ID3Q02535 119 aa10.62□□□□□ -0.71
CDH3-202ENST00000429102 P2RY6Q15077 328 aa10.62□□□□□ -0.71
CDH3-202ENST00000429102 ZNF726P1Q15940 193 aa10.62□□□□□ -0.71
CDH3-202ENST00000429102 C16orf82Q7Z2V1 217 aa10.62□□□□□ -0.71
CDH3-202ENST00000429102 PRSS50Q9UI38 385 aa10.62□□□□□ -0.71
CDH3-202ENST00000429102 FUT9Q9Y231 359 aa10.62□□□□□ -0.71
CDH3-202ENST00000429102 CACNA1HO95180 2353 aa10.62□□□□□ -0.71
CDH3-202ENST00000429102 KIR2DS1A0A191URI9 304 aa10.62□□□□□ -0.71
CDH3-202ENST00000429102 RAMP3O60896 148 aa10.62□□□□□ -0.71
CDH3-202ENST00000429102 NXPH2O95156 264 aa10.62□□□□□ -0.71
CDH3-202ENST00000429102 KIR2DS4P43632 304 aa10.62□□□□□ -0.71
CDH3-202ENST00000429102 HIST1H3AP68431 136 aa10.62□□□□□ -0.71
CDH3-202ENST00000429102 KIR2DS1Q14954 304 aa10.62□□□□□ -0.71
CDH3-202ENST00000429102 NMSQ5H8A3 153 aa10.62□□□□□ -0.71
CDH3-202ENST00000429102 NCR3LG1Q68D85 454 aa10.62□□□□□ -0.71
CDH3-202ENST00000429102 ZNF705AQ6ZN79 300 aaPredicted RBP10.62□□□□□ -0.71
CDH3-202ENST00000429102 FAM58AQ8N1B3 248 aa10.62□□□□□ -0.71
CDH3-202ENST00000429102 OR51G1Q8NGK1 321 aa10.62□□□□□ -0.71
CDH3-202ENST00000429102 PRDM6Q9NQX0 595 aa10.62□□□□□ -0.71
CDH3-202ENST00000429102 SPINK4O60575 86 aa10.61□□□□□ -0.71
CDH3-202ENST00000429102 DKK1O94907 266 aa10.61□□□□□ -0.71
CDH3-202ENST00000429102 BCL2P10415 239 aa10.61□□□□□ -0.71
CDH3-202ENST00000429102 PMS2P11Q13670 270 aa10.61□□□□□ -0.71
CDH3-202ENST00000429102 GCSAMLQ5JQS6 135 aa10.61□□□□□ -0.71
CDH3-202ENST00000429102 LRTM2Q8N967 370 aa10.61□□□□□ -0.71
CDH3-202ENST00000429102 OR2W1Q9Y3N9 320 aa10.61□□□□□ -0.71
CDH3-202ENST00000429102 PIEZO2Q9H5I5 2752 aa10.61□□□□□ -0.71
CDH3-202ENST00000429102 SEC14L6B5MCN3 397 aa10.61□□□□□ -0.71
CDH3-202ENST00000429102 YKT6O15498 198 aa10.61□□□□□ -0.71
CDH3-202ENST00000429102 HBE1P02100 147 aa10.61□□□□□ -0.71
CDH3-202ENST00000429102 SRD5A2P31213 254 aa10.61□□□□□ -0.71
CDH3-202ENST00000429102 FGF12P61328 243 aa10.61□□□□□ -0.71
CDH3-202ENST00000429102 EDDM3AQ14507 147 aa10.61□□□□□ -0.71
CDH3-202ENST00000429102 HIST3H2BBQ8N257 126 aa10.61□□□□□ -0.71
CDH3-202ENST00000429102 PLPPR1Q8TBJ4 325 aa10.61□□□□□ -0.71
CDH3-202ENST00000429102 ATP23Q9Y6H3 246 aa10.61□□□□□ -0.71
CDH3-202ENST00000429102 TRAV24A0A0B4J272 114 aa10.6□□□□□ -0.71
CDH3-202ENST00000429102 XKRY2A2RUG3 117 aa10.6□□□□□ -0.71
CDH3-202ENST00000429102 LRRC3CA6NJW4 275 aa10.6□□□□□ -0.71
CDH3-202ENST00000429102 CA11O75493 328 aa10.6□□□□□ -0.71
CDH3-202ENST00000429102 CELA3BP08861 270 aa10.6□□□□□ -0.71
CDH3-202ENST00000429102 B3GALT5-AS1P59052 145 aa10.6□□□□□ -0.71
CDH3-202ENST00000429102 DMRTC2Q8IXT2 367 aaPredicted RBP10.6□□□□□ -0.71
CDH3-202ENST00000429102 CARFQ8N187 725 aa10.6□□□□□ -0.71
CDH3-202ENST00000429102 DLL3Q9NYJ7 618 aa10.6□□□□□ -0.71
CDH3-202ENST00000429102 DMRT1Q9Y5R6 373 aa10.6□□□□□ -0.71
CDH3-202ENST00000429102 LOC102723971A0A1B0GUV8 181 aa10.6□□□□□ -0.71
CDH3-202ENST00000429102 H7BYZ3 331 aa10.6□□□□□ -0.71
CDH3-202ENST00000429102 WNT9BO14905 357 aa10.6□□□□□ -0.71
CDH3-202ENST00000429102 SYNGR4O95473 234 aa10.6□□□□□ -0.71
CDH3-202ENST00000429102 HSPB1P04792 205 aaKnown RBP10.6□□□□□ -0.71
CDH3-202ENST00000429102 HOXB1P14653 301 aaPredicted RBP10.6□□□□□ -0.71
CDH3-202ENST00000429102 UCP1P25874 307 aa10.6□□□□□ -0.71
CDH3-202ENST00000429102 DDTP30046 118 aa10.6□□□□□ -0.71
CDH3-202ENST00000429102 IL24Q13007 206 aa10.6□□□□□ -0.71
CDH3-202ENST00000429102 ZNF506Q5JVG8 444 aa10.6□□□□□ -0.71
CDH3-202ENST00000429102 FAM90A2PQ658T7 463 aa10.6□□□□□ -0.71
CDH3-202ENST00000429102 NUFIP2Q7Z417 695 aaKnown RBP10.6□□□□□ -0.71
CDH3-202ENST00000429102 TGIF2LXQ8IUE1 241 aa10.6□□□□□ -0.71
CDH3-202ENST00000429102 C10orf35Q96D05 121 aa10.6□□□□□ -0.71
CDH3-202ENST00000429102 TMEM56Q96MV1 263 aa10.6□□□□□ -0.71
CDH3-202ENST00000429102 HINT2Q9BX68 163 aa10.6□□□□□ -0.71
CDH3-202ENST00000429102 TMEM56-RWDD3S4R434 201 aa10.6□□□□□ -0.71
CDH3-202ENST00000429102 ZNF729A6NN14 1252 aaPredicted RBP10.6□□□□□ -0.71
CDH3-202ENST00000429102 PAGE4O60829 102 aa10.6□□□□□ -0.71
CDH3-202ENST00000429102 DFFBO76075 338 aa10.6□□□□□ -0.71
CDH3-202ENST00000429102 IGKV1-39P01597 117 aa10.6□□□□□ -0.71
CDH3-202ENST00000429102 IGKV1D-39P04432 117 aa10.6□□□□□ -0.71
CDH3-202ENST00000429102 MDH2P40926 338 aaKnown RBP10.6□□□□□ -0.71
CDH3-202ENST00000429102 OR3A1P47881 315 aa10.6□□□□□ -0.71
CDH3-202ENST00000429102 COL10A1Q03692 680 aa10.6□□□□□ -0.71
CDH3-202ENST00000429102 SLC38A11Q08AI6 406 aa10.6□□□□□ -0.71
CDH3-202ENST00000429102 OR52L2PQ8NGH6 319 aa10.6□□□□□ -0.71
CDH3-202ENST00000429102 MRPL30Q8TCC3 161 aaKnown RBP10.6□□□□□ -0.71
CDH3-202ENST00000429102 C14orf144Q96I85 54 aa10.6□□□□□ -0.71
CDH3-202ENST00000429102 ABHD14BQ96IU4 210 aa10.6□□□□□ -0.71
CDH3-202ENST00000429102 C1QTNF9BB2RNN3 333 aa10.59□□□□□ -0.71
CDH3-202ENST00000429102 IGKV1D-33P01593 117 aa10.59□□□□□ -0.71
CDH3-202ENST00000429102 IGKV1-33P01594 117 aa10.59□□□□□ -0.71
CDH3-202ENST00000429102 GABRA2P47869 451 aa10.59□□□□□ -0.71
CDH3-202ENST00000429102 RPL29P47914 159 aaKnown RBP10.59□□□□□ -0.71
CDH3-202ENST00000429102 EDDM3BP56851 147 aa10.59□□□□□ -0.71
CDH3-202ENST00000429102 STARD6P59095 220 aa10.59□□□□□ -0.71
CDH3-202ENST00000429102 APH1AQ96BI3 265 aa10.59□□□□□ -0.71
CDH3-202ENST00000429102 PATZ1Q9HBE1 687 aaKnown RBP10.59□□□□□ -0.71
CDH3-202ENST00000429102 TREM2Q9NZC2 230 aa10.59□□□□□ -0.71
CDH3-202ENST00000429102 SEMA5BQ9P283 1151 aa10.59□□□□□ -0.71
CDH3-202ENST00000429102 PPP5D1E7EU14 171 aa10.59□□□□□ -0.71
CDH3-202ENST00000429102 IGKV1-5P01602 117 aa10.59□□□□□ -0.71
CDH3-202ENST00000429102 FKBP2P26885 142 aaKnown RBP10.59□□□□□ -0.71
CDH3-202ENST00000429102 UCP3P55916 312 aa10.59□□□□□ -0.71
CDH3-202ENST00000429102 AESQ08117 197 aa10.59□□□□□ -0.71
CDH3-202ENST00000429102 OR8B8Q15620 311 aa10.59□□□□□ -0.71
CDH3-202ENST00000429102 TMEM42Q69YG0 159 aa10.59□□□□□ -0.71
CDH3-202ENST00000429102 PCSK4Q6UW60 755 aa10.59□□□□□ -0.71
CDH3-202ENST00000429102 TDHQ8IZJ6 230 aa10.59□□□□□ -0.71
CDH3-202ENST00000429102 OR4X1Q8NH49 305 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms