RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 IL1F10Q8WWZ1 152 aa13.35□□□□□ -0.27
TRIM39-209ENST00000428728 NABP2Q9BQ15 211 aa13.35□□□□□ -0.27
TRIM39-209ENST00000428728 MND1Q9BWT6 205 aa13.35□□□□□ -0.27
TRIM39-209ENST00000428728 TMEM59Q9BXS4 323 aa13.35□□□□□ -0.27
TRIM39-209ENST00000428728 PARP11Q9NR21 331 aa13.35□□□□□ -0.27
TRIM39-209ENST00000428728 FKBP14Q9NWM8 211 aa13.35□□□□□ -0.27
TRIM39-209ENST00000428728 GHRLQ9UBU3 117 aa13.35□□□□□ -0.27
TRIM39-209ENST00000428728 WSB1Q9Y6I7 421 aa13.35□□□□□ -0.27
TRIM39-209ENST00000428728 SAA2-SAA4A0A096LPE2 208 aa13.34□□□□□ -0.27
TRIM39-209ENST00000428728 SEC14L6B5MCN3 397 aa13.34□□□□□ -0.27
TRIM39-209ENST00000428728 ATP6V0E1O15342 81 aa13.34□□□□□ -0.27
TRIM39-209ENST00000428728 RGS11O94810 467 aa13.34□□□□□ -0.27
TRIM39-209ENST00000428728 IGF1P05019 195 aa13.34□□□□□ -0.27
TRIM39-209ENST00000428728 UBBP0CG47 229 aa13.34□□□□□ -0.27
TRIM39-209ENST00000428728 SAA2P0DJI9 122 aaPredicted RBP13.34□□□□□ -0.27
TRIM39-209ENST00000428728 VSIG8P0DPA2 414 aa13.34□□□□□ -0.27
TRIM39-209ENST00000428728 HTD2P86397 168 aa13.34□□□□□ -0.27
TRIM39-209ENST00000428728 C9orf66Q5T8R8 295 aa13.34□□□□□ -0.27
TRIM39-209ENST00000428728 LRRTM1Q86UE6 522 aa13.34□□□□□ -0.27
TRIM39-209ENST00000428728 OR2AK2Q8NG84 335 aa13.34□□□□□ -0.27
TRIM39-209ENST00000428728 GALMQ96C23 342 aa13.34□□□□□ -0.27
TRIM39-209ENST00000428728 RITA1Q96K30 269 aa13.34□□□□□ -0.27
TRIM39-209ENST00000428728 PRR25Q96S07 402 aa13.34□□□□□ -0.27
TRIM39-209ENST00000428728 ZNF251Q9BRH9 671 aa13.34□□□□□ -0.27
TRIM39-209ENST00000428728 NICN1Q9BSH3 213 aa13.34□□□□□ -0.27
TRIM39-209ENST00000428728 FAAP24Q9BTP7 215 aa13.34□□□□□ -0.27
TRIM39-209ENST00000428728 ZMAT5Q9UDW3 170 aaKnown RBP13.34□□□□□ -0.27
TRIM39-209ENST00000428728 G3V318 75 aa13.33□□□□□ -0.28
TRIM39-209ENST00000428728 NBR2O15453 112 aa13.33□□□□□ -0.28
TRIM39-209ENST00000428728 ST8SIA5O15466 376 aa13.33□□□□□ -0.28
TRIM39-209ENST00000428728 YPEL1O60688 119 aa13.33□□□□□ -0.28
TRIM39-209ENST00000428728 CDK1P06493 297 aa13.33□□□□□ -0.28
TRIM39-209ENST00000428728 RPS27AP62979 156 aaKnown RBP13.33□□□□□ -0.28
TRIM39-209ENST00000428728 HMGN3Q15651 99 aa13.33□□□□□ -0.28
TRIM39-209ENST00000428728 GLT8D1Q68CQ7 371 aa13.33□□□□□ -0.28
TRIM39-209ENST00000428728 ZNF833PQ6ZTB9 187 aa13.33□□□□□ -0.28
TRIM39-209ENST00000428728 SETD6Q8TBK2 473 aa13.33□□□□□ -0.28
TRIM39-209ENST00000428728 YPEL2Q96QA6 119 aa13.33□□□□□ -0.28
TRIM39-209ENST00000428728 OR5B12Q96R08 314 aa13.33□□□□□ -0.28
TRIM39-209ENST00000428728 ANKRD60Q9BZ19 345 aa13.33□□□□□ -0.28
TRIM39-209ENST00000428728 CHMP1AQ9HD42 196 aaPredicted RBP13.33□□□□□ -0.28
TRIM39-209ENST00000428728 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.33□□□□□ -0.28
TRIM39-209ENST00000428728 ABRACLQ9P1F3 81 aa13.33□□□□□ -0.28
TRIM39-209ENST00000428728 ZNF580Q9UK33 172 aa13.33□□□□□ -0.28
TRIM39-209ENST00000428728 CASQ2O14958 399 aaPredicted RBP13.32□□□□□ -0.28
TRIM39-209ENST00000428728 RAMP3O60896 148 aa13.32□□□□□ -0.28
TRIM39-209ENST00000428728 HLA-DRB1P01911 266 aa13.32□□□□□ -0.28
TRIM39-209ENST00000428728 HTR2CP28335 458 aa13.32□□□□□ -0.28
TRIM39-209ENST00000428728 BLVRBP30043 206 aaPredicted RBP13.32□□□□□ -0.28
TRIM39-209ENST00000428728 ECI1P42126 302 aa13.32□□□□□ -0.28
TRIM39-209ENST00000428728 UNC119Q13432 240 aa13.32□□□□□ -0.28
TRIM39-209ENST00000428728 FHL3Q13643 280 aa13.32□□□□□ -0.28
TRIM39-209ENST00000428728 HSD17B12Q53GQ0 312 aa13.32□□□□□ -0.28
TRIM39-209ENST00000428728 TMEM65Q6PI78 240 aa13.32□□□□□ -0.28
TRIM39-209ENST00000428728 FAM131AQ6UXB0 335 aa13.32□□□□□ -0.28
TRIM39-209ENST00000428728 SVOPQ8N4V2 548 aa13.32□□□□□ -0.28
TRIM39-209ENST00000428728 MS4A15Q8N5U1 240 aa13.32□□□□□ -0.28
TRIM39-209ENST00000428728 OR11H1Q8NG94 326 aa13.32□□□□□ -0.28
TRIM39-209ENST00000428728 KLK15Q9H2R5 256 aa13.32□□□□□ -0.28
TRIM39-209ENST00000428728 IFI27L2Q9H2X8 130 aa13.32□□□□□ -0.28
TRIM39-209ENST00000428728 VCXQ9H320 206 aa13.32□□□□□ -0.28
TRIM39-209ENST00000428728 OR51J1Q9H342 316 aa13.32□□□□□ -0.28
TRIM39-209ENST00000428728 GNB4Q9HAV0 340 aa13.32□□□□□ -0.28
TRIM39-209ENST00000428728 KIAA1456Q9P272 454 aa13.32□□□□□ -0.28
TRIM39-209ENST00000428728 STEAP1Q9UHE8 339 aa13.32□□□□□ -0.28
TRIM39-209ENST00000428728 IGHV7-81A0A0B4J1V7 117 aa13.31□□□□□ -0.28
TRIM39-209ENST00000428728 PTGES3LE9PB15 166 aa13.31□□□□□ -0.28
TRIM39-209ENST00000428728 MED22Q15528 200 aa13.31□□□□□ -0.28
TRIM39-209ENST00000428728 C5orf64Q2M2E5 130 aa13.31□□□□□ -0.28
TRIM39-209ENST00000428728 C1orf100Q5SVJ3 147 aa13.31□□□□□ -0.28
TRIM39-209ENST00000428728 CEACAM19Q7Z692 300 aa13.31□□□□□ -0.28
TRIM39-209ENST00000428728 KCNG3Q8TAE7 436 aa13.31□□□□□ -0.28
TRIM39-209ENST00000428728 MYOZ3Q8TDC0 251 aa13.31□□□□□ -0.28
TRIM39-209ENST00000428728 PHYHIPQ92561 330 aa13.31□□□□□ -0.28
TRIM39-209ENST00000428728 LSM2Q9Y333 95 aaKnown RBP13.31□□□□□ -0.28
TRIM39-209ENST00000428728 A0A0A6YYD4 124 aa13.3□□□□□ -0.28
TRIM39-209ENST00000428728 TRAV41A0A0B4J266 112 aa13.3□□□□□ -0.28
TRIM39-209ENST00000428728 PPIFP30405 207 aaKnown RBP13.3□□□□□ -0.28
TRIM39-209ENST00000428728 SPHARQ15513 63 aa13.3□□□□□ -0.28
TRIM39-209ENST00000428728 ECSCRQ19T08 205 aa13.3□□□□□ -0.28
TRIM39-209ENST00000428728 ZNF260Q3ZCT1 412 aa13.3□□□□□ -0.28
TRIM39-209ENST00000428728 RPL39P5Q59GN2 51 aa13.3□□□□□ -0.28
TRIM39-209ENST00000428728 LY6G6FQ5SQ64 297 aa13.3□□□□□ -0.28
TRIM39-209ENST00000428728 GLDNQ6ZMI3 551 aaPredicted RBP13.3□□□□□ -0.28
TRIM39-209ENST00000428728 HDHD3Q9BSH5 251 aaPredicted RBP13.3□□□□□ -0.28
TRIM39-209ENST00000428728 TM2D1Q9BX74 207 aa13.3□□□□□ -0.28
TRIM39-209ENST00000428728 PARP12Q9H0J9 701 aaKnown RBP13.3□□□□□ -0.28
TRIM39-209ENST00000428728 LRRC42Q9Y546 428 aa13.3□□□□□ -0.28
TRIM39-209ENST00000428728 TMEM14DPA8MWL7 114 aa13.29□□□□□ -0.28
TRIM39-209ENST00000428728 ANKRD65E5RJM6 399 aa13.29□□□□□ -0.28
TRIM39-209ENST00000428728 SLC22A1O15245 554 aa13.29□□□□□ -0.28
TRIM39-209ENST00000428728 NAPSAO96009 420 aa13.29□□□□□ -0.28
TRIM39-209ENST00000428728 SRMP19623 302 aa13.29□□□□□ -0.28
TRIM39-209ENST00000428728 GNB1P62873 340 aa13.29□□□□□ -0.28
TRIM39-209ENST00000428728 NDPQ00604 133 aa13.29□□□□□ -0.28
TRIM39-209ENST00000428728 PLGLAQ15195 96 aa13.29□□□□□ -0.28
TRIM39-209ENST00000428728 P2RY14Q15391 338 aa13.29□□□□□ -0.28
TRIM39-209ENST00000428728 ASPHD1Q5U4P2 390 aa13.29□□□□□ -0.28
TRIM39-209ENST00000428728 LIPKQ5VXJ0 399 aa13.29□□□□□ -0.28
TRIM39-209ENST00000428728 MOB1BQ7L9L4 216 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms