RNA–Protein interactions for RNA: ENST00000428726.6

CD44-208, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CD44, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-208ENST00000428726 ACACBO00763 2458 aa7.07□□□□□ -1.28
CD44-208ENST00000428726 KMT2EQ8IZD2 1858 aa7.07□□□□□ -1.28
CD44-208ENST00000428726 C7orf77A4D0Y5 90 aa7.07□□□□□ -1.28
CD44-208ENST00000428726 FAM90A10PA6NDY2 464 aa7.07□□□□□ -1.28
CD44-208ENST00000428726 FAM90A18PA6NE21 464 aa7.07□□□□□ -1.28
CD44-208ENST00000428726 FAM90A16PA6NEW6 464 aa7.07□□□□□ -1.28
CD44-208ENST00000428726 FAM90A20PA6NIJ5 464 aa7.07□□□□□ -1.28
CD44-208ENST00000428726 FAM90A8PA6NJQ4 464 aa7.07□□□□□ -1.28
CD44-208ENST00000428726 FAM90A7PA6NKC0 464 aa7.07□□□□□ -1.28
CD44-208ENST00000428726 COLCA2A8K830 154 aa7.07□□□□□ -1.28
CD44-208ENST00000428726 FAM90A22PA8MWA6 464 aa7.07□□□□□ -1.28
CD44-208ENST00000428726 FAM90A12PA8MX19 464 aa7.07□□□□□ -1.28
CD44-208ENST00000428726 FAM90A5PA8MXJ8 464 aa7.07□□□□□ -1.28
CD44-208ENST00000428726 FAM90A23PA8MXZ1 464 aa7.07□□□□□ -1.28
CD44-208ENST00000428726 PRSS44E7EML9 344 aa7.07□□□□□ -1.28
CD44-208ENST00000428726 ST8SIA5O15466 376 aa7.07□□□□□ -1.28
CD44-208ENST00000428726 SMPD2O60906 423 aa7.07□□□□□ -1.28
CD44-208ENST00000428726 PTBP3O95758 552 aaKnown RBP7.07□□□□□ -1.28
CD44-208ENST00000428726 FAM90A15PP0C7V4 464 aa7.07□□□□□ -1.28
CD44-208ENST00000428726 FAM90A13PP0C7W8 464 aa7.07□□□□□ -1.28
CD44-208ENST00000428726 FAM90A14PP0C7W9 464 aa7.07□□□□□ -1.28
CD44-208ENST00000428726 FAM90A24PP0C7X0 464 aa7.07□□□□□ -1.28
CD44-208ENST00000428726 PTAFRP25105 342 aa7.07□□□□□ -1.28
CD44-208ENST00000428726 SAXO1Q8IYX7 474 aa7.07□□□□□ -1.28
CD44-208ENST00000428726 MSI2Q96DH6 328 aaKnown RBP7.07□□□□□ -1.28
CD44-208ENST00000428726 GALNT14Q96FL9 552 aa7.07□□□□□ -1.28
CD44-208ENST00000428726 TMEM100Q9NV29 134 aa7.07□□□□□ -1.28
CD44-208ENST00000428726 TUBD1Q9UJT1 453 aa7.07□□□□□ -1.28
CD44-208ENST00000428726 RAB19A4D1S5 217 aa7.07□□□□□ -1.28
CD44-208ENST00000428726 CST4P01036 141 aa7.07□□□□□ -1.28
CD44-208ENST00000428726 SERPINE2P07093 398 aa7.07□□□□□ -1.28
CD44-208ENST00000428726 PAX6P26367 422 aa7.07□□□□□ -1.28
CD44-208ENST00000428726 RPS10P46783 165 aaKnown RBP7.07□□□□□ -1.28
CD44-208ENST00000428726 ELLP55199 621 aaPredicted RBP7.07□□□□□ -1.28
CD44-208ENST00000428726 UCP3P55916 312 aa7.07□□□□□ -1.28
CD44-208ENST00000428726 FGF12P61328 243 aa7.07□□□□□ -1.28
CD44-208ENST00000428726 GNG3P63215 75 aa7.07□□□□□ -1.28
CD44-208ENST00000428726 SPANXN5Q5MJ07 72 aa7.07□□□□□ -1.28
CD44-208ENST00000428726 FAM214BQ7L5A3 538 aa7.07□□□□□ -1.28
CD44-208ENST00000428726 OR5T1Q8NG75 326 aa7.07□□□□□ -1.28
CD44-208ENST00000428726 OR5C1Q8NGR4 320 aa7.07□□□□□ -1.28
CD44-208ENST00000428726 RSG1Q9BU20 258 aa7.07□□□□□ -1.28
CD44-208ENST00000428726 OPA3Q9H6K4 179 aa7.07□□□□□ -1.28
CD44-208ENST00000428726 Q9N2K0 584 aa7.07□□□□□ -1.28
CD44-208ENST00000428726 MYO18BQ8IUG5 2567 aa7.07□□□□□ -1.28
CD44-208ENST00000428726 MALRD1Q5VYJ5 2156 aa7.07□□□□□ -1.28
CD44-208ENST00000428726 IGSF23A1L1A6 192 aa7.06□□□□□ -1.28
CD44-208ENST00000428726 NUDT19A8MXV4 375 aa7.06□□□□□ -1.28
CD44-208ENST00000428726 UMAD1C9J7I0 102 aa7.06□□□□□ -1.28
CD44-208ENST00000428726 NDUFS6O75380 124 aaKnown RBP7.06□□□□□ -1.28
CD44-208ENST00000428726 G6PCP35575 357 aa7.06□□□□□ -1.28
CD44-208ENST00000428726 CCL8P80075 99 aa7.06□□□□□ -1.28
CD44-208ENST00000428726 EIF5AL1Q6IS14 154 aaKnown RBP7.06□□□□□ -1.28
CD44-208ENST00000428726 LIAT1Q6ZQX7 453 aa7.06□□□□□ -1.28
CD44-208ENST00000428726 LILRB1Q8NHL6 650 aaPredicted RBP7.06□□□□□ -1.28
CD44-208ENST00000428726 MRPL30Q8TCC3 161 aaKnown RBP7.06□□□□□ -1.28
CD44-208ENST00000428726 TMEM171Q8WVE6 324 aa7.06□□□□□ -1.28
CD44-208ENST00000428726 HINT2Q9BX68 163 aa7.06□□□□□ -1.28
CD44-208ENST00000428726 CACNG5Q9UF02 275 aa7.06□□□□□ -1.28
CD44-208ENST00000428726 FLNCQ14315 2725 aa7.06□□□□□ -1.28
CD44-208ENST00000428726 C1orf196B1AJZ1 125 aa7.06□□□□□ -1.28
CD44-208ENST00000428726 NKX2-1P43699 371 aaPredicted RBP7.06□□□□□ -1.28
CD44-208ENST00000428726 DYNLT3P51808 116 aa7.06□□□□□ -1.28
CD44-208ENST00000428726 VAMP2P63027 116 aa7.06□□□□□ -1.28
CD44-208ENST00000428726 TCF15Q12870 199 aa7.06□□□□□ -1.28
CD44-208ENST00000428726 GUK1Q16774 197 aa7.06□□□□□ -1.28
CD44-208ENST00000428726 FAM209BQ5JX69 171 aa7.06□□□□□ -1.28
CD44-208ENST00000428726 LRTM2Q8N967 370 aa7.06□□□□□ -1.28
CD44-208ENST00000428726 HIST1H2BAQ96A08 127 aa7.06□□□□□ -1.28
CD44-208ENST00000428726 S100PBPQ96BU1 408 aa7.06□□□□□ -1.28
CD44-208ENST00000428726 MOB3AQ96BX8 217 aa7.06□□□□□ -1.28
CD44-208ENST00000428726 SEC11CQ9BY50 192 aa7.06□□□□□ -1.28
CD44-208ENST00000428726 GLRX2Q9NS18 164 aa7.06□□□□□ -1.28
CD44-208ENST00000428726 MIOXQ9UGB7 285 aa7.06□□□□□ -1.28
CD44-208ENST00000428726 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.06□□□□□ -1.28
CD44-208ENST00000428726 SS18L1O75177 396 aaPredicted RBP7.06□□□□□ -1.28
CD44-208ENST00000428726 PGLYRP1O75594 196 aaPredicted RBP7.06□□□□□ -1.28
CD44-208ENST00000428726 DEDDO75618 318 aa7.06□□□□□ -1.28
CD44-208ENST00000428726 S100A9P06702 114 aaKnown RBP7.06□□□□□ -1.28
CD44-208ENST00000428726 FABP1P07148 127 aa7.06□□□□□ -1.28
CD44-208ENST00000428726 FAM87AP0C7U9 286 aa7.06□□□□□ -1.28
CD44-208ENST00000428726 MYOD1P15172 320 aa7.06□□□□□ -1.28
CD44-208ENST00000428726 EGR1P18146 543 aa7.06□□□□□ -1.28
CD44-208ENST00000428726 RAB5BP61020 215 aa7.06□□□□□ -1.28
CD44-208ENST00000428726 GABRA6Q16445 453 aa7.06□□□□□ -1.28
CD44-208ENST00000428726 DHRS7BQ6IAN0 325 aaPredicted RBP7.06□□□□□ -1.28
CD44-208ENST00000428726 LCN15Q6UWW0 184 aa7.06□□□□□ -1.28
CD44-208ENST00000428726 CCDC71LQ8N9Z2 235 aa7.06□□□□□ -1.28
CD44-208ENST00000428726 ZDHHC16Q969W1 377 aa7.06□□□□□ -1.28
CD44-208ENST00000428726 OR2D2Q9H210 308 aa7.06□□□□□ -1.28
CD44-208ENST00000428726 VSIRQ9H7M9 311 aa7.06□□□□□ -1.28
CD44-208ENST00000428726 H7C1Q1 480 aa7.05□□□□□ -1.28
CD44-208ENST00000428726 ST8SIA3O43173 380 aa7.05□□□□□ -1.28
CD44-208ENST00000428726 APELAP0DMC3 54 aa7.05□□□□□ -1.28
CD44-208ENST00000428726 HOXA1P49639 335 aaPredicted RBP7.05□□□□□ -1.28
CD44-208ENST00000428726 SRSF7Q16629 238 aaKnown RBP eCLIP7.05□□□□□ -1.28
CD44-208ENST00000428726 PCSK4Q6UW60 755 aa7.05□□□□□ -1.28
CD44-208ENST00000428726 Q6ZS49 121 aa7.05□□□□□ -1.28
CD44-208ENST00000428726 SEM1Q6ZVN7 128 aa7.05□□□□□ -1.28
CD44-208ENST00000428726 MOGAT3Q86VF5 341 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms