RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 PLCXD1Q9NUJ7 323 aa12.09□□□□□ -0.47
SEC13-210ENST00000428626 ZNF580Q9UK33 172 aa12.09□□□□□ -0.47
SEC13-210ENST00000428626 JPT1Q9UK76 154 aa12.09□□□□□ -0.47
SEC13-210ENST00000428626 WSB1Q9Y6I7 421 aa12.09□□□□□ -0.47
SEC13-210ENST00000428626 IGHV7-81A0A0B4J1V7 117 aa12.08□□□□□ -0.48
SEC13-210ENST00000428626 MYL12BO14950 172 aa12.08□□□□□ -0.48
SEC13-210ENST00000428626 ATP6V0E1O15342 81 aa12.08□□□□□ -0.48
SEC13-210ENST00000428626 SNRPBP14678 240 aaKnown RBP12.08□□□□□ -0.48
SEC13-210ENST00000428626 HTD2P86397 168 aa12.08□□□□□ -0.48
SEC13-210ENST00000428626 NDPQ00604 133 aa12.08□□□□□ -0.48
SEC13-210ENST00000428626 HMGN3Q15651 99 aa12.08□□□□□ -0.48
SEC13-210ENST00000428626 ZNF833PQ6ZTB9 187 aa12.08□□□□□ -0.48
SEC13-210ENST00000428626 C6orf201Q7Z4U5 140 aa12.08□□□□□ -0.48
SEC13-210ENST00000428626 C8orf59Q8N0T1 100 aaPredicted RBP12.08□□□□□ -0.48
SEC13-210ENST00000428626 NKAIN3Q8N8D7 197 aa12.08□□□□□ -0.48
SEC13-210ENST00000428626 OR5M8Q8NGP6 311 aa12.08□□□□□ -0.48
SEC13-210ENST00000428626 NICN1Q9BSH3 213 aa12.08□□□□□ -0.48
SEC13-210ENST00000428626 FAAP24Q9BTP7 215 aa12.08□□□□□ -0.48
SEC13-210ENST00000428626 ANKRD60Q9BZ19 345 aa12.08□□□□□ -0.48
SEC13-210ENST00000428626 PARP12Q9H0J9 701 aaKnown RBP12.08□□□□□ -0.48
SEC13-210ENST00000428626 IFI27L2Q9H2X8 130 aa12.08□□□□□ -0.48
SEC13-210ENST00000428626 FBXO7Q9Y3I1 522 aa12.08□□□□□ -0.48
SEC13-210ENST00000428626 SORL1Q92673 2214 aa12.07□□□□□ -0.48
SEC13-210ENST00000428626 HUWE1Q7Z6Z7 4374 aaKnown RBP12.07□□□□□ -0.48
SEC13-210ENST00000428626 SAA2-SAA4A0A096LPE2 208 aa12.07□□□□□ -0.48
SEC13-210ENST00000428626 A0A0A6YYD4 124 aa12.07□□□□□ -0.48
SEC13-210ENST00000428626 SEC14L6B5MCN3 397 aa12.07□□□□□ -0.48
SEC13-210ENST00000428626 I3L521 148 aa12.07□□□□□ -0.48
SEC13-210ENST00000428626 YPEL1O60688 119 aa12.07□□□□□ -0.48
SEC13-210ENST00000428626 IGLV1-40P01703 118 aa12.07□□□□□ -0.48
SEC13-210ENST00000428626 SAA2P0DJI9 122 aaPredicted RBP12.07□□□□□ -0.48
SEC13-210ENST00000428626 HTR2CP28335 458 aa12.07□□□□□ -0.48
SEC13-210ENST00000428626 GNB1P62873 340 aa12.07□□□□□ -0.48
SEC13-210ENST00000428626 UNC119Q13432 240 aa12.07□□□□□ -0.48
SEC13-210ENST00000428626 ACSM3Q53FZ2 586 aa12.07□□□□□ -0.48
SEC13-210ENST00000428626 OGFRL1Q5TC84 451 aaPredicted RBP12.07□□□□□ -0.48
SEC13-210ENST00000428626 ZNF554Q86TJ5 538 aa12.07□□□□□ -0.48
SEC13-210ENST00000428626 ZNF491Q8N8L2 437 aa12.07□□□□□ -0.48
SEC13-210ENST00000428626 OR11H1Q8NG94 326 aa12.07□□□□□ -0.48
SEC13-210ENST00000428626 YPEL2Q96QA6 119 aa12.07□□□□□ -0.48
SEC13-210ENST00000428626 ZNF251Q9BRH9 671 aa12.07□□□□□ -0.48
SEC13-210ENST00000428626 OR51J1Q9H342 316 aa12.07□□□□□ -0.48
SEC13-210ENST00000428626 RAB9BQ9NP90 201 aa12.07□□□□□ -0.48
SEC13-210ENST00000428626 C8orf4Q9NR00 106 aa12.07□□□□□ -0.48
SEC13-210ENST00000428626 KCNIP1Q9NZI2 227 aa12.07□□□□□ -0.48
SEC13-210ENST00000428626 ST8SIA5O15466 376 aa12.06□□□□□ -0.48
SEC13-210ENST00000428626 RAMP3O60896 148 aa12.06□□□□□ -0.48
SEC13-210ENST00000428626 HLA-DRB1P01911 266 aa12.06□□□□□ -0.48
SEC13-210ENST00000428626 CD37P11049 281 aa12.06□□□□□ -0.48
SEC13-210ENST00000428626 BLVRBP30043 206 aaPredicted RBP12.06□□□□□ -0.48
SEC13-210ENST00000428626 ECI1P42126 302 aa12.06□□□□□ -0.48
SEC13-210ENST00000428626 RPS27AP62979 156 aaKnown RBP12.06□□□□□ -0.48
SEC13-210ENST00000428626 QRFPP83859 136 aa12.06□□□□□ -0.48
SEC13-210ENST00000428626 C5orf64Q2M2E5 130 aa12.06□□□□□ -0.48
SEC13-210ENST00000428626 C19orf54Q5BKX5 351 aa12.06□□□□□ -0.48
SEC13-210ENST00000428626 C1orf100Q5SVJ3 147 aa12.06□□□□□ -0.48
SEC13-210ENST00000428626 C9orf66Q5T8R8 295 aa12.06□□□□□ -0.48
SEC13-210ENST00000428626 NPBQ8NG41 125 aa12.06□□□□□ -0.48
SEC13-210ENST00000428626 WWC2-AS2Q96NR7 200 aa12.06□□□□□ -0.48
SEC13-210ENST00000428626 OR5B12Q96R08 314 aa12.06□□□□□ -0.48
SEC13-210ENST00000428626 PARP11Q9NR21 331 aa12.06□□□□□ -0.48
SEC13-210ENST00000428626 GHRLQ9UBU3 117 aa12.06□□□□□ -0.48
SEC13-210ENST00000428626 LSM2Q9Y333 95 aaKnown RBP12.06□□□□□ -0.48
SEC13-210ENST00000428626 CASQ2O14958 399 aaPredicted RBP12.05□□□□□ -0.48
SEC13-210ENST00000428626 NBR2O15453 112 aa12.05□□□□□ -0.48
SEC13-210ENST00000428626 SOX15O60248 233 aa12.05□□□□□ -0.48
SEC13-210ENST00000428626 NDUFA3O95167 84 aa12.05□□□□□ -0.48
SEC13-210ENST00000428626 NAPSAO96009 420 aa12.05□□□□□ -0.48
SEC13-210ENST00000428626 MAPK3P27361 379 aaPredicted RBP12.05□□□□□ -0.48
SEC13-210ENST00000428626 GABPB1Q06547 395 aaPredicted RBP12.05□□□□□ -0.48
SEC13-210ENST00000428626 ZNF260Q3ZCT1 412 aa12.05□□□□□ -0.48
SEC13-210ENST00000428626 RPL39P5Q59GN2 51 aa12.05□□□□□ -0.48
SEC13-210ENST00000428626 LY6G6FQ5SQ64 297 aa12.05□□□□□ -0.48
SEC13-210ENST00000428626 ZNF880Q6PDB4 577 aa12.05□□□□□ -0.48
SEC13-210ENST00000428626 SVOPQ8N4V2 548 aa12.05□□□□□ -0.48
SEC13-210ENST00000428626 CASTOR1Q8WTX7 329 aa12.05□□□□□ -0.48
SEC13-210ENST00000428626 GALMQ96C23 342 aa12.05□□□□□ -0.48
SEC13-210ENST00000428626 UBE2E2Q96LR5 201 aa12.05□□□□□ -0.48
SEC13-210ENST00000428626 GFI1Q99684 422 aa12.05□□□□□ -0.48
SEC13-210ENST00000428626 TMED9Q9BVK6 235 aa12.05□□□□□ -0.48
SEC13-210ENST00000428626 TM2D1Q9BX74 207 aa12.05□□□□□ -0.48
SEC13-210ENST00000428626 CST11Q9H112 138 aa12.05□□□□□ -0.48
SEC13-210ENST00000428626 ALX4Q9H161 411 aaPredicted RBP12.05□□□□□ -0.48
SEC13-210ENST00000428626 TMEM14DPA8MWL7 114 aa12.04□□□□□ -0.48
SEC13-210ENST00000428626 FCN1O00602 326 aa12.04□□□□□ -0.48
SEC13-210ENST00000428626 CDK1P06493 297 aa12.04□□□□□ -0.48
SEC13-210ENST00000428626 CT45A6P0DMU7 189 aa12.04□□□□□ -0.48
SEC13-210ENST00000428626 CT45A5P0DMU8 189 aa12.04□□□□□ -0.48
SEC13-210ENST00000428626 CT45A7P0DMV0 189 aa12.04□□□□□ -0.48
SEC13-210ENST00000428626 OR5H8P0DN80 308 aa12.04□□□□□ -0.48
SEC13-210ENST00000428626 RUNX1Q01196 453 aa12.04□□□□□ -0.48
SEC13-210ENST00000428626 FAM131AQ6UXB0 335 aa12.04□□□□□ -0.48
SEC13-210ENST00000428626 GLDNQ6ZMI3 551 aaPredicted RBP12.04□□□□□ -0.48
SEC13-210ENST00000428626 MINDY2Q8NBR6 621 aa12.04□□□□□ -0.48
SEC13-210ENST00000428626 IL1F10Q8WWZ1 152 aa12.04□□□□□ -0.48
SEC13-210ENST00000428626 NEDD4LQ96PU5 975 aa12.04□□□□□ -0.48
SEC13-210ENST00000428626 ASCL2Q99929 193 aa12.04□□□□□ -0.48
SEC13-210ENST00000428626 HDHD3Q9BSH5 251 aaPredicted RBP12.04□□□□□ -0.48
SEC13-210ENST00000428626 TMEM59Q9BXS4 323 aa12.04□□□□□ -0.48
SEC13-210ENST00000428626 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms