RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 LANCL1O43813 399 aa12.81□□□□□ -0.36
VARS-216ENST00000428445 SC5DO75845 299 aa12.81□□□□□ -0.36
VARS-216ENST00000428445 IGLV1-40P01703 118 aa12.81□□□□□ -0.36
VARS-216ENST00000428445 CD1AP06126 327 aa12.81□□□□□ -0.36
VARS-216ENST00000428445 OR8U8P0C7N1 319 aa12.81□□□□□ -0.36
VARS-216ENST00000428445 BLVRBP30043 206 aaPredicted RBP12.81□□□□□ -0.36
VARS-216ENST00000428445 PPP1CCP36873 323 aaKnown RBP12.81□□□□□ -0.36
VARS-216ENST00000428445 OR3A3P47888 321 aa12.81□□□□□ -0.36
VARS-216ENST00000428445 TAS2R43P59537 309 aa12.81□□□□□ -0.36
VARS-216ENST00000428445 LY6G6FQ5SQ64 297 aa12.81□□□□□ -0.36
VARS-216ENST00000428445 TTC23Q5W5X9 447 aa12.81□□□□□ -0.36
VARS-216ENST00000428445 SIGIRRQ6IA17 410 aa12.81□□□□□ -0.36
VARS-216ENST00000428445 THRSPQ92748 146 aa12.81□□□□□ -0.36
VARS-216ENST00000428445 TAF9BQ9HBM6 251 aa12.81□□□□□ -0.36
VARS-216ENST00000428445 C8orf4Q9NR00 106 aa12.81□□□□□ -0.36
VARS-216ENST00000428445 GHRLQ9UBU3 117 aa12.81□□□□□ -0.36
VARS-216ENST00000428445 MRPS28Q9Y2Q9 187 aaKnown RBP12.81□□□□□ -0.36
VARS-216ENST00000428445 DNAH1Q9P2D7 4330 aa12.8□□□□□ -0.36
VARS-216ENST00000428445 TRAV41A0A0B4J266 112 aa12.8□□□□□ -0.36
VARS-216ENST00000428445 TRIM64CA6NLI5 447 aa12.8□□□□□ -0.36
VARS-216ENST00000428445 SOX15O60248 233 aa12.8□□□□□ -0.36
VARS-216ENST00000428445 SAP30O75446 220 aa12.8□□□□□ -0.36
VARS-216ENST00000428445 FRMD6-AS1P0C7T7 363 aa12.8□□□□□ -0.36
VARS-216ENST00000428445 FUT3P21217 361 aa12.8□□□□□ -0.36
VARS-216ENST00000428445 INSL3P51460 131 aa12.8□□□□□ -0.36
VARS-216ENST00000428445 RPS11P62280 158 aaKnown RBP eCLIP12.8□□□□□ -0.36
VARS-216ENST00000428445 NDPQ00604 133 aa12.8□□□□□ -0.36
VARS-216ENST00000428445 ECSCRQ19T08 205 aa12.8□□□□□ -0.36
VARS-216ENST00000428445 HAPLN4Q86UW8 402 aa12.8□□□□□ -0.36
VARS-216ENST00000428445 JAGN1Q8N5M9 183 aa12.8□□□□□ -0.36
VARS-216ENST00000428445 LYSTQ99698 3801 aa12.8□□□□□ -0.36
VARS-216ENST00000428445 NABP2Q9BQ15 211 aa12.8□□□□□ -0.36
VARS-216ENST00000428445 SELENOIQ9C0D9 397 aa12.8□□□□□ -0.36
VARS-216ENST00000428445 MBNL3Q9NUK0 354 aaKnown RBP12.8□□□□□ -0.36
VARS-216ENST00000428445 IGHV4OR15-8A0A075B7B6 117 aa12.79□□□□□ -0.36
VARS-216ENST00000428445 A0A087WW49 117 aa12.79□□□□□ -0.36
VARS-216ENST00000428445 TRBV5-7A0A0A0MS05 114 aa12.79□□□□□ -0.36
VARS-216ENST00000428445 PNMA8CA0A1B0GUJ8 204 aa12.79□□□□□ -0.36
VARS-216ENST00000428445 BAG2O95816 211 aa12.79□□□□□ -0.36
VARS-216ENST00000428445 MAS1P04201 325 aa12.79□□□□□ -0.36
VARS-216ENST00000428445 HTD2P86397 168 aa12.79□□□□□ -0.36
VARS-216ENST00000428445 RUNX1Q01196 453 aa12.79□□□□□ -0.36
VARS-216ENST00000428445 GABPB1Q06547 395 aaPredicted RBP12.79□□□□□ -0.36
VARS-216ENST00000428445 DOC2BQ14184 412 aa12.79□□□□□ -0.36
VARS-216ENST00000428445 FAM27D1Q5T7N8 215 aa12.79□□□□□ -0.36
VARS-216ENST00000428445 ZFAND6Q6FIF0 208 aa12.79□□□□□ -0.36
VARS-216ENST00000428445 ZNF485Q8NCK3 441 aa12.79□□□□□ -0.36
VARS-216ENST00000428445 SETD9Q8NE22 299 aa12.79□□□□□ -0.36
VARS-216ENST00000428445 ZNF251Q9BRH9 671 aa12.79□□□□□ -0.36
VARS-216ENST00000428445 UQCC2Q9BRT2 126 aa12.79□□□□□ -0.36
VARS-216ENST00000428445 KCNIP1Q9NZI2 227 aa12.79□□□□□ -0.36
VARS-216ENST00000428445 A3GALT2U3KPV4 340 aa12.79□□□□□ -0.36
VARS-216ENST00000428445 STARD9Q9P2P6 4700 aa12.79□□□□□ -0.36
VARS-216ENST00000428445 A0A1W2PN81 502 aa12.78□□□□□ -0.36
VARS-216ENST00000428445 FCN1O00602 326 aa12.78□□□□□ -0.36
VARS-216ENST00000428445 NBR2O15453 112 aa12.78□□□□□ -0.36
VARS-216ENST00000428445 HLA-DRB1P01911 266 aa12.78□□□□□ -0.36
VARS-216ENST00000428445 GP9P14770 177 aa12.78□□□□□ -0.36
VARS-216ENST00000428445 CHRNA7P36544 502 aa12.78□□□□□ -0.36
VARS-216ENST00000428445 CAPGP40121 348 aa12.78□□□□□ -0.36
VARS-216ENST00000428445 C5orf64Q2M2E5 130 aa12.78□□□□□ -0.36
VARS-216ENST00000428445 AWAT2Q6E213 333 aa12.78□□□□□ -0.36
VARS-216ENST00000428445 LIN54Q6MZP7 749 aa12.78□□□□□ -0.36
VARS-216ENST00000428445 ZNF429Q86V71 674 aa12.78□□□□□ -0.36
VARS-216ENST00000428445 MINDY2Q8NBR6 621 aa12.78□□□□□ -0.36
VARS-216ENST00000428445 MRPL30Q8TCC3 161 aaKnown RBP12.78□□□□□ -0.36
VARS-216ENST00000428445 ARPC1AQ92747 370 aa12.78□□□□□ -0.36
VARS-216ENST00000428445 FAM46BQ96A09 425 aa12.78□□□□□ -0.36
VARS-216ENST00000428445 PGLYRP3Q96LB9 341 aa12.78□□□□□ -0.36
VARS-216ENST00000428445 OR14A2Q96R54 314 aa12.78□□□□□ -0.36
VARS-216ENST00000428445 ABHD14AQ9BUJ0 271 aa12.78□□□□□ -0.36
VARS-216ENST00000428445 CSMD3Q7Z407 3707 aa12.77□□□□□ -0.37
VARS-216ENST00000428445 YPEL1O60688 119 aa12.77□□□□□ -0.37
VARS-216ENST00000428445 CRTAPO75718 401 aaPredicted RBP12.77□□□□□ -0.37
VARS-216ENST00000428445 RGS11O94810 467 aa12.77□□□□□ -0.37
VARS-216ENST00000428445 IGHV3-11P01762 117 aa12.77□□□□□ -0.37
VARS-216ENST00000428445 MGMTP16455 207 aa12.77□□□□□ -0.37
VARS-216ENST00000428445 SRSF7Q16629 238 aaKnown RBP eCLIP12.77□□□□□ -0.37
VARS-216ENST00000428445 GLDNQ6ZMI3 551 aaPredicted RBP12.77□□□□□ -0.37
VARS-216ENST00000428445 LYPD6Q86Y78 171 aa12.77□□□□□ -0.37
VARS-216ENST00000428445 NKAIN3Q8N8D7 197 aa12.77□□□□□ -0.37
VARS-216ENST00000428445 YPEL2Q96QA6 119 aa12.77□□□□□ -0.37
VARS-216ENST00000428445 TOLLIPQ9H0E2 274 aa12.77□□□□□ -0.37
VARS-216ENST00000428445 GHITMQ9H3K2 345 aa12.77□□□□□ -0.37
VARS-216ENST00000428445 FBXL15Q9H469 300 aa12.77□□□□□ -0.37
VARS-216ENST00000428445 TPSG1Q9NRR2 321 aa12.77□□□□□ -0.37
VARS-216ENST00000428445 CNOT2Q9NZN8 540 aaKnown RBP12.77□□□□□ -0.37
VARS-216ENST00000428445 JPT1Q9UK76 154 aa12.77□□□□□ -0.37
VARS-216ENST00000428445 ERGIC3Q9Y282 383 aa12.77□□□□□ -0.37
VARS-216ENST00000428445 SAA2-SAA4A0A096LPE2 208 aa12.76□□□□□ -0.37
VARS-216ENST00000428445 EFCAB10A6NFE3 127 aa12.76□□□□□ -0.37
VARS-216ENST00000428445 LINC01619G3V211 115 aa12.76□□□□□ -0.37
VARS-216ENST00000428445 SAA2P0DJI9 122 aaPredicted RBP12.76□□□□□ -0.37
VARS-216ENST00000428445 EGR2P11161 476 aaPredicted RBP12.76□□□□□ -0.37
VARS-216ENST00000428445 LYL1P12980 280 aa12.76□□□□□ -0.37
VARS-216ENST00000428445 MAPK3P27361 379 aaPredicted RBP12.76□□□□□ -0.37
VARS-216ENST00000428445 ST3GAL4Q11206 333 aa12.76□□□□□ -0.37
VARS-216ENST00000428445 LRRC36Q1X8D7 754 aa12.76□□□□□ -0.37
VARS-216ENST00000428445 C19orf54Q5BKX5 351 aa12.76□□□□□ -0.37
VARS-216ENST00000428445 ZNF833PQ6ZTB9 187 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms