RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 PLGRKTQ9HBL7 147 aa14.49□□□□□ -0.09
PSPC1-202ENST00000427943 CHMP1AQ9HD42 196 aaPredicted RBP14.49□□□□□ -0.09
PSPC1-202ENST00000427943 AK6Q9Y3D8 172 aaKnown RBP14.49□□□□□ -0.09
PSPC1-202ENST00000427943 BPNT1O95861 308 aa14.48□□□□□ -0.09
PSPC1-202ENST00000427943 SLC2A2P11168 524 aaPredicted RBP14.48□□□□□ -0.09
PSPC1-202ENST00000427943 HTD2P86397 168 aa14.48□□□□□ -0.09
PSPC1-202ENST00000427943 MLLT11Q13015 90 aaPredicted RBP14.48□□□□□ -0.09
PSPC1-202ENST00000427943 STEAP3Q658P3 488 aa14.48□□□□□ -0.09
PSPC1-202ENST00000427943 LCNL1Q6ZST4 164 aa14.48□□□□□ -0.09
PSPC1-202ENST00000427943 OR51D1Q8NGF3 324 aa14.48□□□□□ -0.09
PSPC1-202ENST00000427943 IL1F10Q8WWZ1 152 aa14.48□□□□□ -0.09
PSPC1-202ENST00000427943 RCC1LQ96I51 464 aaKnown RBP14.48□□□□□ -0.09
PSPC1-202ENST00000427943 LPAR5Q9H1C0 372 aa14.48□□□□□ -0.09
PSPC1-202ENST00000427943 ISYNA1Q9NPH2 558 aa14.48□□□□□ -0.09
PSPC1-202ENST00000427943 ERICH4A6NGS2 130 aa14.47□□□□□ -0.09
PSPC1-202ENST00000427943 SLC17A2O00624 439 aa14.47□□□□□ -0.09
PSPC1-202ENST00000427943 SOCS1O15524 211 aa14.47□□□□□ -0.09
PSPC1-202ENST00000427943 YPEL1O60688 119 aa14.47□□□□□ -0.09
PSPC1-202ENST00000427943 CD37P11049 281 aa14.47□□□□□ -0.09
PSPC1-202ENST00000427943 CPEP16870 476 aa14.47□□□□□ -0.09
PSPC1-202ENST00000427943 OR3A3P47888 321 aa14.47□□□□□ -0.09
PSPC1-202ENST00000427943 THBS3P49746 956 aa14.47□□□□□ -0.09
PSPC1-202ENST00000427943 FABP5Q01469 135 aa14.47□□□□□ -0.09
PSPC1-202ENST00000427943 MMDQ15546 238 aa14.47□□□□□ -0.09
PSPC1-202ENST00000427943 PRSS48Q7RTY5 328 aa14.47□□□□□ -0.09
PSPC1-202ENST00000427943 MRPL41Q8IXM3 137 aaKnown RBP14.47□□□□□ -0.09
PSPC1-202ENST00000427943 COMMD1Q8N668 190 aa14.47□□□□□ -0.09
PSPC1-202ENST00000427943 OR8H1Q8NGG4 311 aa14.47□□□□□ -0.09
PSPC1-202ENST00000427943 CNBD2Q96M20 576 aa14.47□□□□□ -0.09
PSPC1-202ENST00000427943 DUX3Q96PT4 197 aa14.47□□□□□ -0.09
PSPC1-202ENST00000427943 YPEL2Q96QA6 119 aa14.47□□□□□ -0.09
PSPC1-202ENST00000427943 HDHD3Q9BSH5 251 aaPredicted RBP14.47□□□□□ -0.09
PSPC1-202ENST00000427943 VCX3BQ9H321 246 aa14.47□□□□□ -0.09
PSPC1-202ENST00000427943 PLEKHJ1Q9NW61 149 aa14.47□□□□□ -0.09
PSPC1-202ENST00000427943 ABRACLQ9P1F3 81 aa14.47□□□□□ -0.09
PSPC1-202ENST00000427943 SAA2-SAA4A0A096LPE2 208 aa14.46□□□□□ -0.09
PSPC1-202ENST00000427943 ST8SIA5O15466 376 aa14.46□□□□□ -0.09
PSPC1-202ENST00000427943 ARL6IP5O75915 188 aa14.46□□□□□ -0.09
PSPC1-202ENST00000427943 RGS11O94810 467 aa14.46□□□□□ -0.09
PSPC1-202ENST00000427943 NAPSAO96009 420 aa14.46□□□□□ -0.09
PSPC1-202ENST00000427943 RPLP1P05386 114 aaKnown RBP14.46□□□□□ -0.09
PSPC1-202ENST00000427943 SAA2P0DJI9 122 aaPredicted RBP14.46□□□□□ -0.09
PSPC1-202ENST00000427943 ARSBP15848 533 aa14.46□□□□□ -0.09
PSPC1-202ENST00000427943 CNTFRP26992 372 aa14.46□□□□□ -0.09
PSPC1-202ENST00000427943 CALRP27797 417 aaKnown RBP14.46□□□□□ -0.09
PSPC1-202ENST00000427943 CLDN12P56749 244 aa14.46□□□□□ -0.09
PSPC1-202ENST00000427943 TRAM1Q15629 374 aa14.46□□□□□ -0.09
PSPC1-202ENST00000427943 RAB11BQ15907 218 aa14.46□□□□□ -0.09
PSPC1-202ENST00000427943 OR2AK2Q8NG84 335 aa14.46□□□□□ -0.09
PSPC1-202ENST00000427943 MGLLQ99685 303 aa14.46□□□□□ -0.09
PSPC1-202ENST00000427943 NABP2Q9BQ15 211 aa14.46□□□□□ -0.09
PSPC1-202ENST00000427943 URM1Q9BTM9 101 aaKnown RBP14.46□□□□□ -0.09
PSPC1-202ENST00000427943 ZFP57Q9NU63 452 aa14.46□□□□□ -0.09
PSPC1-202ENST00000427943 AK3Q9UIJ7 227 aa14.46□□□□□ -0.09
PSPC1-202ENST00000427943 RRP9O43818 475 aaKnown RBP14.45□□□□□ -0.1
PSPC1-202ENST00000427943 PSMA1P25786 263 aaKnown RBP14.45□□□□□ -0.1
PSPC1-202ENST00000427943 HOXD3P31249 432 aaPredicted RBP14.45□□□□□ -0.1
PSPC1-202ENST00000427943 SOX6P35712 828 aa14.45□□□□□ -0.1
PSPC1-202ENST00000427943 ACTBP60709 375 aa14.45□□□□□ -0.1
PSPC1-202ENST00000427943 ZNF880Q6PDB4 577 aa14.45□□□□□ -0.1
PSPC1-202ENST00000427943 TEX38Q6PEX7 206 aa14.45□□□□□ -0.1
PSPC1-202ENST00000427943 ZNF833PQ6ZTB9 187 aa14.45□□□□□ -0.1
PSPC1-202ENST00000427943 ZNF695Q8IW36 515 aa14.45□□□□□ -0.1
PSPC1-202ENST00000427943 RITA1Q96K30 269 aa14.45□□□□□ -0.1
PSPC1-202ENST00000427943 PARP12Q9H0J9 701 aaKnown RBP14.45□□□□□ -0.1
PSPC1-202ENST00000427943 IFI27L2Q9H2X8 130 aa14.45□□□□□ -0.1
PSPC1-202ENST00000427943 STEAP1Q9UHE8 339 aa14.45□□□□□ -0.1
PSPC1-202ENST00000427943 ZNF107Q9UII5 783 aaPredicted RBP14.45□□□□□ -0.1
PSPC1-202ENST00000427943 LRRC42Q9Y546 428 aa14.45□□□□□ -0.1
PSPC1-202ENST00000427943 DUS4LO95620 317 aaKnown RBP14.44□□□□□ -0.1
PSPC1-202ENST00000427943 PNLIPRP3Q17RR3 467 aa14.44□□□□□ -0.1
PSPC1-202ENST00000427943 LY6G6FQ5SQ64 297 aa14.44□□□□□ -0.1
PSPC1-202ENST00000427943 MOB1BQ7L9L4 216 aa14.44□□□□□ -0.1
PSPC1-202ENST00000427943 FOXI3A8MTJ6 420 aaPredicted RBP14.43□□□□□ -0.1
PSPC1-202ENST00000427943 VDAC1P21796 283 aa14.43□□□□□ -0.1
PSPC1-202ENST00000427943 MYCNOSP40205 109 aa14.43□□□□□ -0.1
PSPC1-202ENST00000427943 HSPA13P48723 471 aa14.43□□□□□ -0.1
PSPC1-202ENST00000427943 VEGFCP49767 419 aa14.43□□□□□ -0.1
PSPC1-202ENST00000427943 KRTAP10-11P60412 298 aa14.43□□□□□ -0.1
PSPC1-202ENST00000427943 HLA-DRB3P79483 266 aa14.43□□□□□ -0.1
PSPC1-202ENST00000427943 TBCEQ15813 527 aaPredicted RBP14.43□□□□□ -0.1
PSPC1-202ENST00000427943 DEFB136Q30KP8 78 aa14.43□□□□□ -0.1
PSPC1-202ENST00000427943 RPL39P5Q59GN2 51 aa14.43□□□□□ -0.1
PSPC1-202ENST00000427943 CXorf66Q5JRM2 361 aaPredicted RBP14.43□□□□□ -0.1
PSPC1-202ENST00000427943 HES5Q5TA89 166 aa14.43□□□□□ -0.1
PSPC1-202ENST00000427943 ZNF251Q9BRH9 671 aa14.43□□□□□ -0.1
PSPC1-202ENST00000427943 GON7Q9BXV9 100 aa14.43□□□□□ -0.1
PSPC1-202ENST00000427943 OR1A1Q9P1Q5 309 aa14.43□□□□□ -0.1
PSPC1-202ENST00000427943 SLC23A1Q9UHI7 598 aa14.43□□□□□ -0.1
PSPC1-202ENST00000427943 K7EIL1 84 aa14.42□□□□□ -0.1
PSPC1-202ENST00000427943 SLC6A1P30531 599 aa14.42□□□□□ -0.1
PSPC1-202ENST00000427943 RAB25P57735 213 aa14.42□□□□□ -0.1
PSPC1-202ENST00000427943 CFHR3Q02985 330 aa14.42□□□□□ -0.1
PSPC1-202ENST00000427943 PLA2G7Q13093 441 aa14.42□□□□□ -0.1
PSPC1-202ENST00000427943 FOXE3Q13461 319 aa14.42□□□□□ -0.1
PSPC1-202ENST00000427943 SSX1Q16384 188 aa14.42□□□□□ -0.1
PSPC1-202ENST00000427943 FAM131AQ6UXB0 335 aa14.42□□□□□ -0.1
PSPC1-202ENST00000427943 ZNF367Q7RTV3 350 aa14.42□□□□□ -0.1
PSPC1-202ENST00000427943 FAM89BQ8N5H3 189 aa14.42□□□□□ -0.1
PSPC1-202ENST00000427943 RAX2Q96IS3 184 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms