RNA–Protein interactions for RNA: ENST00000427635.6

HERC4-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 6,391 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-206ENST00000427635 J3QR06 171 aa5□□□□□ -1.61
HERC4-206ENST00000427635 ASAH2BP0C7U1 165 aa5□□□□□ -1.61
HERC4-206ENST00000427635 HIST1H1DP16402 221 aaKnown RBP5□□□□□ -1.61
HERC4-206ENST00000427635 CX3CL1P78423 397 aa5□□□□□ -1.61
HERC4-206ENST00000427635 HLA-DRB3P79483 266 aa5□□□□□ -1.61
HERC4-206ENST00000427635 DMRTC1Q5HYR2 192 aa5□□□□□ -1.61
HERC4-206ENST00000427635 HAPLN4Q86UW8 402 aa5□□□□□ -1.61
HERC4-206ENST00000427635 OR4C5Q8NGB2 326 aa5□□□□□ -1.61
HERC4-206ENST00000427635 ITLN1Q8WWA0 313 aa5□□□□□ -1.61
HERC4-206ENST00000427635 MARS2Q96GW9 593 aaKnown RBP5□□□□□ -1.61
HERC4-206ENST00000427635 C2orf88Q9BSF0 95 aa5□□□□□ -1.61
HERC4-206ENST00000427635 PAXXQ9BUH6 204 aa5□□□□□ -1.61
HERC4-206ENST00000427635 CLEC7AQ9BXN2 247 aa5□□□□□ -1.61
HERC4-206ENST00000427635 NXT2Q9NPJ8 142 aaKnown RBP5□□□□□ -1.61
HERC4-206ENST00000427635 RBFOX1Q9NWB1 397 aaKnown RBP5□□□□□ -1.61
HERC4-206ENST00000427635 V9GYY9 64 aa5□□□□□ -1.61
HERC4-206ENST00000427635 TRGV2A0A075B6R0 118 aa4.99□□□□□ -1.61
HERC4-206ENST00000427635 TMEM218A2RU14 115 aa4.99□□□□□ -1.61
HERC4-206ENST00000427635 CEACAM8P31997 349 aaPredicted RBP4.99□□□□□ -1.61
HERC4-206ENST00000427635 NMUP48645 174 aa4.99□□□□□ -1.61
HERC4-206ENST00000427635 SFRP2Q96HF1 295 aa4.99□□□□□ -1.61
HERC4-206ENST00000427635 ARHGAP5-AS1Q96IT6 56 aa4.99□□□□□ -1.61
HERC4-206ENST00000427635 H7C1H1 209 aa4.99□□□□□ -1.61
HERC4-206ENST00000427635 SPINK4O60575 86 aa4.99□□□□□ -1.61
HERC4-206ENST00000427635 FCMRO60667 390 aa4.99□□□□□ -1.61
HERC4-206ENST00000427635 CFDP00746 253 aaPredicted RBP4.99□□□□□ -1.61
HERC4-206ENST00000427635 LGALS3P17931 250 aaKnown RBP4.99□□□□□ -1.61
HERC4-206ENST00000427635 SLC6A1P30531 599 aa4.99□□□□□ -1.61
HERC4-206ENST00000427635 RPS27P42677 84 aaKnown RBP4.99□□□□□ -1.61
HERC4-206ENST00000427635 FAM159AQ6UWV7 190 aa4.99□□□□□ -1.61
HERC4-206ENST00000427635 ARRDC1Q8N5I2 433 aa4.99□□□□□ -1.61
HERC4-206ENST00000427635 GSN-AS1Q9NRJ2 163 aa4.99□□□□□ -1.61
HERC4-206ENST00000427635 RALYQ9UKM9 306 aaKnown RBP4.99□□□□□ -1.61
HERC4-206ENST00000427635 MYO10Q9HD67 2058 aa4.99□□□□□ -1.61
HERC4-206ENST00000427635 GDF9O60383 454 aa4.99□□□□□ -1.61
HERC4-206ENST00000427635 HPXP02790 462 aa4.99□□□□□ -1.61
HERC4-206ENST00000427635 SULT1A2P50226 295 aa4.99□□□□□ -1.61
HERC4-206ENST00000427635 HERV-K104P63124 156 aa4.99□□□□□ -1.61
HERC4-206ENST00000427635 TNFRSF9Q07011 255 aa4.99□□□□□ -1.61
HERC4-206ENST00000427635 CD69Q07108 199 aa4.99□□□□□ -1.61
HERC4-206ENST00000427635 SSX1Q16384 188 aa4.99□□□□□ -1.61
HERC4-206ENST00000427635 MRPL23Q16540 153 aaKnown RBP4.99□□□□□ -1.61
HERC4-206ENST00000427635 MPV17LQ2QL34 196 aa4.99□□□□□ -1.61
HERC4-206ENST00000427635 TMEM128Q5BJH2 165 aa4.99□□□□□ -1.61
HERC4-206ENST00000427635 SLC25A53Q5H9E4 307 aa4.99□□□□□ -1.61
HERC4-206ENST00000427635 FAM166AQ6J272 317 aa4.99□□□□□ -1.61
HERC4-206ENST00000427635 PRSS54Q6PEW0 395 aa4.99□□□□□ -1.61
HERC4-206ENST00000427635 C16orf47Q6ZP98 133 aaPredicted RBP4.99□□□□□ -1.61
HERC4-206ENST00000427635 FAM89BQ8N5H3 189 aa4.99□□□□□ -1.61
HERC4-206ENST00000427635 MRPL24Q96A35 216 aaKnown RBP4.99□□□□□ -1.61
HERC4-206ENST00000427635 SLC17A5Q9NRA2 495 aa4.99□□□□□ -1.61
HERC4-206ENST00000427635 EMCNQ9ULC0 261 aa4.99□□□□□ -1.61
HERC4-206ENST00000427635 RP1L1Q8IWN7 2480 aaPredicted RBP4.99□□□□□ -1.61
HERC4-206ENST00000427635 OR4C46A6NHA9 309 aa4.99□□□□□ -1.61
HERC4-206ENST00000427635 IFITM5A6NNB3 132 aa4.99□□□□□ -1.61
HERC4-206ENST00000427635 SELENOPP49908 381 aa4.99□□□□□ -1.61
HERC4-206ENST00000427635 RPS20P60866 119 aaKnown RBP4.99□□□□□ -1.61
HERC4-206ENST00000427635 SMN1Q16637 294 aaKnown RBP4.99□□□□□ -1.61
HERC4-206ENST00000427635 Q6ZNX1 250 aa4.99□□□□□ -1.61
HERC4-206ENST00000427635 MMD2Q8IY49 270 aa4.99□□□□□ -1.61
HERC4-206ENST00000427635 TMEM251Q8N6I4 163 aa4.99□□□□□ -1.61
HERC4-206ENST00000427635 C17orf47Q8NEP4 570 aa4.99□□□□□ -1.61
HERC4-206ENST00000427635 GPR27Q9NS67 375 aa4.99□□□□□ -1.61
HERC4-206ENST00000427635 ARRDC5A6NEK1 342 aa4.99□□□□□ -1.61
HERC4-206ENST00000427635 NPIPB11E5RHQ5 1161 aa4.99□□□□□ -1.61
HERC4-206ENST00000427635 IGKV3-20P01619 116 aa4.99□□□□□ -1.61
HERC4-206ENST00000427635 CSN3P07498 182 aa4.99□□□□□ -1.61
HERC4-206ENST00000427635 CD37P11049 281 aa4.99□□□□□ -1.61
HERC4-206ENST00000427635 GP2P55259 537 aaKnown RBP4.99□□□□□ -1.61
HERC4-206ENST00000427635 RAG2P55895 527 aa4.99□□□□□ -1.61
HERC4-206ENST00000427635 DLX6P56179 175 aa4.99□□□□□ -1.61
HERC4-206ENST00000427635 SUMO2P61956 95 aaKnown RBP4.99□□□□□ -1.61
HERC4-206ENST00000427635 BTG1P62324 171 aa4.99□□□□□ -1.61
HERC4-206ENST00000427635 Q6ZSR9 355 aa4.99□□□□□ -1.61
HERC4-206ENST00000427635 OR8B12Q8NGG6 310 aa4.99□□□□□ -1.61
HERC4-206ENST00000427635 ZNF502Q8TBZ5 544 aa4.99□□□□□ -1.61
HERC4-206ENST00000427635 GPR82Q96P67 336 aa4.99□□□□□ -1.61
HERC4-206ENST00000427635 PEF1Q9UBV8 284 aaKnown RBP4.99□□□□□ -1.61
HERC4-206ENST00000427635 TNFRSF18Q9Y5U5 241 aa4.99□□□□□ -1.61
HERC4-206ENST00000427635 NUP98P52948 1817 aa4.99□□□□□ -1.61
HERC4-206ENST00000427635 CITO14578 2027 aa4.99□□□□□ -1.61
HERC4-206ENST00000427635 SCN11AQ9UI33 1791 aa4.99□□□□□ -1.61
HERC4-206ENST00000427635 A0A0B4J2E0 115 aa4.98□□□□□ -1.61
HERC4-206ENST00000427635 A0A1B0GX12 115 aa4.98□□□□□ -1.61
HERC4-206ENST00000427635 GGCTO75223 188 aaKnown RBP4.98□□□□□ -1.61
HERC4-206ENST00000427635 CA11O75493 328 aa4.98□□□□□ -1.61
HERC4-206ENST00000427635 NUDT3O95989 172 aa4.98□□□□□ -1.61
HERC4-206ENST00000427635 HOXB3P14651 431 aaPredicted RBP4.98□□□□□ -1.61
HERC4-206ENST00000427635 TMEM241Q24JQ0 296 aa4.98□□□□□ -1.61
HERC4-206ENST00000427635 C6orf201Q7Z4U5 140 aa4.98□□□□□ -1.61
HERC4-206ENST00000427635 ZDHHC22Q8N966 263 aa4.98□□□□□ -1.61
HERC4-206ENST00000427635 POLR3KQ9Y2Y1 108 aaPredicted RBP4.98□□□□□ -1.61
HERC4-206ENST00000427635 TMSB15BA0A087X1C1 80 aa4.98□□□□□ -1.61
HERC4-206ENST00000427635 TMEM272A0A1B0GTI8 110 aa4.98□□□□□ -1.61
HERC4-206ENST00000427635 TGFBR3LH3BV60 316 aa4.98□□□□□ -1.61
HERC4-206ENST00000427635 FCN1O00602 326 aa4.98□□□□□ -1.61
HERC4-206ENST00000427635 SLC17A2O00624 439 aa4.98□□□□□ -1.61
HERC4-206ENST00000427635 SLC25A20O43772 301 aa4.98□□□□□ -1.61
HERC4-206ENST00000427635 PLAUP00749 431 aa4.98□□□□□ -1.61
HERC4-206ENST00000427635 JUNBP17275 347 aaPredicted RBP4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms