RNA–Protein interactions for RNA: ENST00000427526.6

LIG1-202, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,027 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-202ENST00000427526 H0YL77 283 aa12.1□□□□□ -0.47
LIG1-202ENST00000427526 AP4M1O00189 453 aa12.1□□□□□ -0.47
LIG1-202ENST00000427526 DFFBO76075 338 aa12.1□□□□□ -0.47
LIG1-202ENST00000427526 IZUMO4Q1ZYL8 232 aa12.1□□□□□ -0.47
LIG1-202ENST00000427526 OR10V1Q8NGI7 309 aa12.1□□□□□ -0.47
LIG1-202ENST00000427526 WSB1Q9Y6I7 421 aa12.1□□□□□ -0.47
LIG1-202ENST00000427526 ZFHX2Q9C0A1 2572 aaPredicted RBP12.1□□□□□ -0.47
LIG1-202ENST00000427526 ZNF727A8MUV8 499 aa12.1□□□□□ -0.47
LIG1-202ENST00000427526 DEGS1O15121 323 aa12.1□□□□□ -0.47
LIG1-202ENST00000427526 IL18BPO95998 194 aa12.1□□□□□ -0.47
LIG1-202ENST00000427526 NQO2P16083 231 aa12.1□□□□□ -0.47
LIG1-202ENST00000427526 RPL23AP62750 156 aaKnown RBP12.1□□□□□ -0.47
LIG1-202ENST00000427526 TESK1Q15569 626 aa12.1□□□□□ -0.47
LIG1-202ENST00000427526 ZNF429Q86V71 674 aa12.1□□□□□ -0.47
LIG1-202ENST00000427526 LSM10Q969L4 123 aaKnown RBP12.1□□□□□ -0.47
LIG1-202ENST00000427526 NEU1Q99519 415 aa12.1□□□□□ -0.47
LIG1-202ENST00000427526 GP6Q9HCN6 339 aa12.1□□□□□ -0.47
LIG1-202ENST00000427526 PRSS50Q9UI38 385 aa12.1□□□□□ -0.47
LIG1-202ENST00000427526 RIF1Q5UIP0 2472 aaKnown RBP12.1□□□□□ -0.47
LIG1-202ENST00000427526 H3BP45 60 aa12.09□□□□□ -0.47
LIG1-202ENST00000427526 HBE1P02100 147 aa12.09□□□□□ -0.47
LIG1-202ENST00000427526 CA6P23280 308 aa12.09□□□□□ -0.47
LIG1-202ENST00000427526 APLNRP35414 380 aa12.09□□□□□ -0.47
LIG1-202ENST00000427526 IGFBP7Q16270 282 aa12.09□□□□□ -0.47
LIG1-202ENST00000427526 KHDC3LQ587J8 217 aa12.09□□□□□ -0.47
LIG1-202ENST00000427526 OR2T2Q6IF00 324 aa12.09□□□□□ -0.47
LIG1-202ENST00000427526 THNSL2Q86YJ6 484 aa12.09□□□□□ -0.47
LIG1-202ENST00000427526 FDCSPQ8NFU4 85 aa12.09□□□□□ -0.47
LIG1-202ENST00000427526 TREM2Q9NZC2 230 aa12.09□□□□□ -0.47
LIG1-202ENST00000427526 PRR33A8MZF0 331 aa12.09□□□□□ -0.47
LIG1-202ENST00000427526 IFNA17P01571 189 aa12.09□□□□□ -0.47
LIG1-202ENST00000427526 TAGLN2P37802 199 aaKnown RBP12.09□□□□□ -0.47
LIG1-202ENST00000427526 DLK1P80370 383 aa12.09□□□□□ -0.47
LIG1-202ENST00000427526 IL1F10Q8WWZ1 152 aa12.09□□□□□ -0.47
LIG1-202ENST00000427526 C14orf144Q96I85 54 aa12.09□□□□□ -0.47
LIG1-202ENST00000427526 TCEAL7Q9BRU2 100 aa12.09□□□□□ -0.47
LIG1-202ENST00000427526 SPRR3Q9UBC9 169 aa12.09□□□□□ -0.47
LIG1-202ENST00000427526 CFAP47Q6ZTR5 3102 aa12.09□□□□□ -0.47
LIG1-202ENST00000427526 ZFHX4Q86UP3 3567 aa12.09□□□□□ -0.47
LIG1-202ENST00000427526 TMEM267Q0VDI3 215 aaPredicted RBP12.08□□□□□ -0.47
LIG1-202ENST00000427526 CLN3Q13286 438 aa12.08□□□□□ -0.47
LIG1-202ENST00000427526 OR1K1Q8NGR3 316 aa12.08□□□□□ -0.47
LIG1-202ENST00000427526 OR51B6Q9H340 312 aa12.08□□□□□ -0.47
LIG1-202ENST00000427526 J3QT63 122 aa12.08□□□□□ -0.48
LIG1-202ENST00000427526 PPIHO43447 177 aaKnown RBP12.08□□□□□ -0.48
LIG1-202ENST00000427526 WISP2O76076 250 aa12.08□□□□□ -0.48
LIG1-202ENST00000427526 CNOT4O95628 575 aaKnown RBP12.08□□□□□ -0.48
LIG1-202ENST00000427526 IGKV1-5P01602 117 aa12.08□□□□□ -0.48
LIG1-202ENST00000427526 TNFSF10P50591 281 aa12.08□□□□□ -0.48
LIG1-202ENST00000427526 SOX8P57073 446 aa12.08□□□□□ -0.48
LIG1-202ENST00000427526 UBE2KP61086 200 aa12.08□□□□□ -0.48
LIG1-202ENST00000427526 ELOBQ15370 118 aa12.08□□□□□ -0.48
LIG1-202ENST00000427526 ZNF585BQ52M93 769 aa12.08□□□□□ -0.48
LIG1-202ENST00000427526 OR10G4Q8NGN3 311 aa12.08□□□□□ -0.48
LIG1-202ENST00000427526 BCL2L2Q92843 193 aaPredicted RBP12.08□□□□□ -0.48
LIG1-202ENST00000427526 CACNG5Q9UF02 275 aa12.08□□□□□ -0.48
LIG1-202ENST00000427526 FRYQ5TBA9 3013 aa12.08□□□□□ -0.48
LIG1-202ENST00000427526 LRP5LA4QPB2 252 aa12.08□□□□□ -0.48
LIG1-202ENST00000427526 SYNGR2O43760 224 aa12.08□□□□□ -0.48
LIG1-202ENST00000427526 IFNA5P01569 189 aa12.08□□□□□ -0.48
LIG1-202ENST00000427526 CEBPGP53567 150 aa12.08□□□□□ -0.48
LIG1-202ENST00000427526 RAB2AP61019 212 aa12.08□□□□□ -0.48
LIG1-202ENST00000427526 ZNF497Q6ZNH5 498 aa12.08□□□□□ -0.48
LIG1-202ENST00000427526 WDR86Q86TI4 376 aa12.08□□□□□ -0.48
LIG1-202ENST00000427526 ZNF292O60281 2723 aa12.08□□□□□ -0.48
LIG1-202ENST00000427526 PRRC2CQ9Y520 2896 aaKnown RBP12.07□□□□□ -0.48
LIG1-202ENST00000427526 ESPL1Q14674 2120 aa12.07□□□□□ -0.48
LIG1-202ENST00000427526 ARHGAP21Q5T5U3 1957 aa12.07□□□□□ -0.48
LIG1-202ENST00000427526 TRGV5A0A0B4J1U4 118 aa12.07□□□□□ -0.48
LIG1-202ENST00000427526 TRAV39A0A0B4J263 110 aa12.07□□□□□ -0.48
LIG1-202ENST00000427526 LOC102723971A0A1B0GUV8 181 aa12.07□□□□□ -0.48
LIG1-202ENST00000427526 A0A1W2PR80 420 aa12.07□□□□□ -0.48
LIG1-202ENST00000427526 ERVK11-1P61568 191 aa12.07□□□□□ -0.48
LIG1-202ENST00000427526 ARL16Q0P5N6 197 aa12.07□□□□□ -0.48
LIG1-202ENST00000427526 SLC35E3Q7Z769 313 aa12.07□□□□□ -0.48
LIG1-202ENST00000427526 TVP23CQ96ET8 276 aa12.07□□□□□ -0.48
LIG1-202ENST00000427526 WDYHV1Q96HA8 205 aa12.07□□□□□ -0.48
LIG1-202ENST00000427526 LURAP1Q96LR2 239 aa12.07□□□□□ -0.48
LIG1-202ENST00000427526 SSX3Q99909 188 aa12.07□□□□□ -0.48
LIG1-202ENST00000427526 RPRMQ9NS64 109 aa12.07□□□□□ -0.48
LIG1-202ENST00000427526 CXorf65A6NEN9 183 aa12.07□□□□□ -0.48
LIG1-202ENST00000427526 MDH2P40926 338 aaKnown RBP12.07□□□□□ -0.48
LIG1-202ENST00000427526 MDP1Q86V88 176 aa12.07□□□□□ -0.48
LIG1-202ENST00000427526 MCEMP1Q8IX19 187 aa12.07□□□□□ -0.48
LIG1-202ENST00000427526 TMEM178AQ8NBL3 297 aa12.07□□□□□ -0.48
LIG1-202ENST00000427526 Q8WTZ3 238 aa12.07□□□□□ -0.48
LIG1-202ENST00000427526 TCTEX1D2Q8WW35 142 aa12.07□□□□□ -0.48
LIG1-202ENST00000427526 NIPSNAP3BQ9BS92 247 aa12.07□□□□□ -0.48
LIG1-202ENST00000427526 RSG1Q9BU20 258 aa12.07□□□□□ -0.48
LIG1-202ENST00000427526 C12orf49Q9H741 205 aa12.07□□□□□ -0.48
LIG1-202ENST00000427526 MMP24Q9Y5R2 645 aa12.07□□□□□ -0.48
LIG1-202ENST00000427526 SPATA46Q5T0L3 261 aa12.06□□□□□ -0.48
LIG1-202ENST00000427526 ZNF343Q6P1L6 599 aa12.06□□□□□ -0.48
LIG1-202ENST00000427526 MOB1BQ7L9L4 216 aa12.06□□□□□ -0.48
LIG1-202ENST00000427526 HAPLN4Q86UW8 402 aa12.06□□□□□ -0.48
LIG1-202ENST00000427526 ZNF525Q8N782 197 aa12.06□□□□□ -0.48
LIG1-202ENST00000427526 RHOVQ96L33 236 aa12.06□□□□□ -0.48
LIG1-202ENST00000427526 PPP1R3CQ9UQK1 317 aa12.06□□□□□ -0.48
LIG1-202ENST00000427526 ATXN7O15265 892 aaPredicted RBP12.06□□□□□ -0.48
LIG1-202ENST00000427526 OR2H2O95918 312 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms