RNA–Protein interactions for RNA: ENST00000427193.1

C9orf3-205, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-205ENST00000427193 A0A096LNT2 108 aa4.43□□□□□ -1.7
C9orf3-205ENST00000427193 TRAV24A0A0B4J272 114 aa4.43□□□□□ -1.7
C9orf3-205ENST00000427193 CCDC160A6NGH7 325 aa4.43□□□□□ -1.7
C9orf3-205ENST00000427193 MFNGO00587 321 aa4.43□□□□□ -1.7
C9orf3-205ENST00000427193 CTDSPLO15194 276 aa4.43□□□□□ -1.7
C9orf3-205ENST00000427193 MAGEB3O15480 346 aa4.43□□□□□ -1.7
C9orf3-205ENST00000427193 XRCC3O43542 346 aa4.43□□□□□ -1.7
C9orf3-205ENST00000427193 NOL3O60936 208 aaKnown RBP4.43□□□□□ -1.7
C9orf3-205ENST00000427193 CA11O75493 328 aa4.43□□□□□ -1.7
C9orf3-205ENST00000427193 IGHV4-39P01824 125 aa4.43□□□□□ -1.7
C9orf3-205ENST00000427193 GLAP06280 429 aa4.43□□□□□ -1.7
C9orf3-205ENST00000427193 EIF4EP06730 217 aaKnown RBP4.43□□□□□ -1.7
C9orf3-205ENST00000427193 HCKP08631 526 aa4.43□□□□□ -1.7
C9orf3-205ENST00000427193 GTF2F2P13984 249 aa4.43□□□□□ -1.7
C9orf3-205ENST00000427193 MGMTP16455 207 aa4.43□□□□□ -1.7
C9orf3-205ENST00000427193 BCL3P20749 454 aa4.43□□□□□ -1.7
C9orf3-205ENST00000427193 PTBP1P26599 531 aaKnown RBP eCLIP4.43□□□□□ -1.7
C9orf3-205ENST00000427193 SOX6P35712 828 aa4.43□□□□□ -1.7
C9orf3-205ENST00000427193 RBMXP38159 391 aaKnown RBP4.43□□□□□ -1.7
C9orf3-205ENST00000427193 RANBP1P43487 201 aa4.43□□□□□ -1.7
C9orf3-205ENST00000427193 EFNA4P52798 201 aa4.43□□□□□ -1.7
C9orf3-205ENST00000427193 SNRPD2P62316 118 aaKnown RBP4.43□□□□□ -1.7
C9orf3-205ENST00000427193 CCL8P80075 99 aa4.43□□□□□ -1.7
C9orf3-205ENST00000427193 DEFA6Q01524 100 aa4.43□□□□□ -1.7
C9orf3-205ENST00000427193 GPR176Q14439 515 aa4.43□□□□□ -1.7
C9orf3-205ENST00000427193 MOGAT2Q3SYC2 334 aa4.43□□□□□ -1.7
C9orf3-205ENST00000427193 UBE2NLQ5JXB2 153 aa4.43□□□□□ -1.7
C9orf3-205ENST00000427193 IDNKQ5T6J7 187 aa4.43□□□□□ -1.7
C9orf3-205ENST00000427193 STUMQ69YW2 141 aa4.43□□□□□ -1.7
C9orf3-205ENST00000427193 METAP1DQ6UB28 335 aaPredicted RBP4.43□□□□□ -1.7
C9orf3-205ENST00000427193 C12orf54Q6X4T0 127 aa4.43□□□□□ -1.7
C9orf3-205ENST00000427193 ACP7Q6ZNF0 438 aa4.43□□□□□ -1.7
C9orf3-205ENST00000427193 LRRC28Q86X40 367 aaPredicted RBP4.43□□□□□ -1.7
C9orf3-205ENST00000427193 IQCF2Q8IXL9 164 aa4.43□□□□□ -1.7
C9orf3-205ENST00000427193 MKXQ8IYA7 352 aa4.43□□□□□ -1.7
C9orf3-205ENST00000427193 Q8IYB0 196 aa4.43□□□□□ -1.7
C9orf3-205ENST00000427193 SAMD12Q8N8I0 201 aa4.43□□□□□ -1.7
C9orf3-205ENST00000427193 OR8S1Q8NH09 359 aa4.43□□□□□ -1.7
C9orf3-205ENST00000427193 MCFD2Q8NI22 146 aa4.43□□□□□ -1.7
C9orf3-205ENST00000427193 TRIM63Q969Q1 353 aa4.43□□□□□ -1.7
C9orf3-205ENST00000427193 SDSLQ96GA7 329 aa4.43□□□□□ -1.7
C9orf3-205ENST00000427193 CEP19Q96LK0 163 aa4.43□□□□□ -1.7
C9orf3-205ENST00000427193 ZNF488Q96MN9 340 aa4.43□□□□□ -1.7
C9orf3-205ENST00000427193 ABHD1Q96SE0 405 aa4.43□□□□□ -1.7
C9orf3-205ENST00000427193 CCL19Q99731 98 aa4.43□□□□□ -1.7
C9orf3-205ENST00000427193 GAL3ST1Q99999 423 aa4.43□□□□□ -1.7
C9orf3-205ENST00000427193 NICN1Q9BSH3 213 aa4.43□□□□□ -1.7
C9orf3-205ENST00000427193 CACNG6Q9BXT2 260 aa4.43□□□□□ -1.7
C9orf3-205ENST00000427193 SHARPINQ9H0F6 387 aa4.43□□□□□ -1.7
C9orf3-205ENST00000427193 FN3KRPQ9HA64 309 aa4.43□□□□□ -1.7
C9orf3-205ENST00000427193 TMEM165Q9HC07 324 aa4.43□□□□□ -1.7
C9orf3-205ENST00000427193 YAE1D1Q9NRH1 226 aa4.43□□□□□ -1.7
C9orf3-205ENST00000427193 TMEM106BQ9NUM4 274 aa4.43□□□□□ -1.7
C9orf3-205ENST00000427193 RBFOX1Q9NWB1 397 aaKnown RBP4.43□□□□□ -1.7
C9orf3-205ENST00000427193 RHBDL2Q9NX52 303 aa4.43□□□□□ -1.7
C9orf3-205ENST00000427193 RABL2AQ9UBK7 228 aaPredicted RBP4.43□□□□□ -1.7
C9orf3-205ENST00000427193 KAAG1Q9UBP8 84 aa4.43□□□□□ -1.7
C9orf3-205ENST00000427193 RAB22AQ9UL26 194 aa4.43□□□□□ -1.7
C9orf3-205ENST00000427193 POLDIP2Q9Y2S7 368 aa4.43□□□□□ -1.7
C9orf3-205ENST00000427193 PEX16Q9Y5Y5 336 aa4.43□□□□□ -1.7
C9orf3-205ENST00000427193 NPTNQ9Y639 398 aa4.43□□□□□ -1.7
C9orf3-205ENST00000427193 IGLV5-45A0A087WSX0 123 aa4.42□□□□□ -1.7
C9orf3-205ENST00000427193 TRBV6-6A0A0A6YYG2 114 aa4.42□□□□□ -1.7
C9orf3-205ENST00000427193 IGHV1-69-2A0A0G2JMI3 117 aa4.42□□□□□ -1.7
C9orf3-205ENST00000427193 SMIM1B2RUZ4 78 aa4.42□□□□□ -1.7
C9orf3-205ENST00000427193 F5H0A9 414 aaPredicted RBP4.42□□□□□ -1.7
C9orf3-205ENST00000427193 LGALS8O00214 317 aa4.42□□□□□ -1.7
C9orf3-205ENST00000427193 GEMIN2O14893 280 aaKnown RBP4.42□□□□□ -1.7
C9orf3-205ENST00000427193 SOCS1O15524 211 aa4.42□□□□□ -1.7
C9orf3-205ENST00000427193 SSX5O60225 188 aa4.42□□□□□ -1.7
C9orf3-205ENST00000427193 HPGDSO60760 199 aa4.42□□□□□ -1.7
C9orf3-205ENST00000427193 NAPSAO96009 420 aa4.42□□□□□ -1.7
C9orf3-205ENST00000427193 IGHV2-70P01814 119 aa4.42□□□□□ -1.7
C9orf3-205ENST00000427193 CSN2P05814 226 aa4.42□□□□□ -1.7
C9orf3-205ENST00000427193 PSG2P11465 335 aa4.42□□□□□ -1.7
C9orf3-205ENST00000427193 MUC1P15941 1255 aaPredicted RBP4.42□□□□□ -1.7
C9orf3-205ENST00000427193 CDK2P24941 298 aa4.42□□□□□ -1.7
C9orf3-205ENST00000427193 COL8A2P25067 703 aa4.42□□□□□ -1.7
C9orf3-205ENST00000427193 TMEM33P57088 247 aa4.42□□□□□ -1.7
C9orf3-205ENST00000427193 ZMYND11Q15326 602 aa4.42□□□□□ -1.7
C9orf3-205ENST00000427193 MPV17LQ2QL34 196 aa4.42□□□□□ -1.7
C9orf3-205ENST00000427193 PIGYQ3MUY2 71 aa4.42□□□□□ -1.7
C9orf3-205ENST00000427193 SLC22A6Q4U2R8 563 aa4.42□□□□□ -1.7
C9orf3-205ENST00000427193 SPIN3Q5JUX0 258 aa4.42□□□□□ -1.7
C9orf3-205ENST00000427193 FAM201AQ5SY85 155 aa4.42□□□□□ -1.7
C9orf3-205ENST00000427193 RAB12Q6IQ22 244 aa4.42□□□□□ -1.7
C9orf3-205ENST00000427193 ZNF880Q6PDB4 577 aa4.42□□□□□ -1.7
C9orf3-205ENST00000427193 CNIH2Q6PI25 160 aa4.42□□□□□ -1.7
C9orf3-205ENST00000427193 ZNF841Q6ZN19 808 aa4.42□□□□□ -1.7
C9orf3-205ENST00000427193 C17orf107Q6ZR85 190 aa4.42□□□□□ -1.7
C9orf3-205ENST00000427193 Q6ZS49 121 aa4.42□□□□□ -1.7
C9orf3-205ENST00000427193 LINC00596Q86U02 117 aa4.42□□□□□ -1.7
C9orf3-205ENST00000427193 RTN4RL2Q86UN3 420 aa4.42□□□□□ -1.7
C9orf3-205ENST00000427193 FAM58AQ8N1B3 248 aa4.42□□□□□ -1.7
C9orf3-205ENST00000427193 OSR2Q8N2R0 312 aa4.42□□□□□ -1.7
C9orf3-205ENST00000427193 CD177Q8N6Q3 437 aa4.42□□□□□ -1.7
C9orf3-205ENST00000427193 OR4M1Q8NGD0 313 aa4.42□□□□□ -1.7
C9orf3-205ENST00000427193 OR10K1Q8NGX5 313 aa4.42□□□□□ -1.7
C9orf3-205ENST00000427193 ZNF671Q8TAW3 534 aa4.42□□□□□ -1.7
C9orf3-205ENST00000427193 LRRC29Q8WV35 223 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms