RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 Q8WTZ3 238 aa11.4□□□□□ -0.59
USP42-203ENST00000426246 POM121Q96HA1 1249 aa11.4□□□□□ -0.59
USP42-203ENST00000426246 MMP7P09237 267 aaPredicted RBP11.39□□□□□ -0.59
USP42-203ENST00000426246 PGA5P0DJD9 388 aa11.39□□□□□ -0.59
USP42-203ENST00000426246 VDAC1P21796 283 aa11.39□□□□□ -0.59
USP42-203ENST00000426246 COL8A2P25067 703 aa11.39□□□□□ -0.59
USP42-203ENST00000426246 DEFB124Q8NES8 71 aa11.39□□□□□ -0.59
USP42-203ENST00000426246 LEAP2Q969E1 77 aa11.39□□□□□ -0.59
USP42-203ENST00000426246 TACC2O95359 2948 aa11.39□□□□□ -0.59
USP42-203ENST00000426246 RPL36A-HNRNPH2H7BZ11 118 aa11.39□□□□□ -0.59
USP42-203ENST00000426246 CFPP27918 469 aa11.39□□□□□ -0.59
USP42-203ENST00000426246 EIF2S3P41091 472 aaKnown RBP11.39□□□□□ -0.59
USP42-203ENST00000426246 ERVFRD-1P60508 538 aa11.39□□□□□ -0.59
USP42-203ENST00000426246 OR52L2PQ8NGH6 319 aa11.39□□□□□ -0.59
USP42-203ENST00000426246 OR2D2Q9H210 308 aa11.39□□□□□ -0.59
USP42-203ENST00000426246 KIR2DS1A0A191URI9 304 aa11.39□□□□□ -0.59
USP42-203ENST00000426246 NDUFA2O43678 99 aa11.39□□□□□ -0.59
USP42-203ENST00000426246 PRB4P10163 310 aaPredicted RBP11.39□□□□□ -0.59
USP42-203ENST00000426246 ECI1P42126 302 aa11.39□□□□□ -0.59
USP42-203ENST00000426246 KIR2DS4P43632 304 aa11.39□□□□□ -0.59
USP42-203ENST00000426246 KIR2DS1Q14954 304 aa11.39□□□□□ -0.59
USP42-203ENST00000426246 PRAMEF6Q5VXH4 476 aa11.39□□□□□ -0.59
USP42-203ENST00000426246 ZNF709Q8N972 641 aa11.39□□□□□ -0.59
USP42-203ENST00000426246 RYDENQ9NUL5 291 aaKnown RBP11.39□□□□□ -0.59
USP42-203ENST00000426246 ZGRF1Q86YA3 2104 aa11.38□□□□□ -0.59
USP42-203ENST00000426246 GAPDHP04406 335 aaKnown RBP11.38□□□□□ -0.59
USP42-203ENST00000426246 FTH1P19P0C7X4 201 aa11.38□□□□□ -0.59
USP42-203ENST00000426246 DTYMKP23919 212 aa11.38□□□□□ -0.59
USP42-203ENST00000426246 HOXC12P31275 282 aa11.38□□□□□ -0.59
USP42-203ENST00000426246 MDP1Q86V88 176 aa11.38□□□□□ -0.59
USP42-203ENST00000426246 FBLN5Q9UBX5 448 aa11.38□□□□□ -0.59
USP42-203ENST00000426246 MUC6Q6W4X9 2439 aa11.38□□□□□ -0.59
USP42-203ENST00000426246 IGKV1-6A0A0C4DH72 117 aa11.38□□□□□ -0.59
USP42-203ENST00000426246 SPAARA0A1B0GVQ0 90 aa11.38□□□□□ -0.59
USP42-203ENST00000426246 HEXAP06865 529 aa11.38□□□□□ -0.59
USP42-203ENST00000426246 OR8U8P0C7N1 319 aa11.38□□□□□ -0.59
USP42-203ENST00000426246 ZDHHC16Q969W1 377 aa11.38□□□□□ -0.59
USP42-203ENST00000426246 TVP23CQ96ET8 276 aa11.38□□□□□ -0.59
USP42-203ENST00000426246 UNKLQ9H9P5 680 aaKnown RBP11.38□□□□□ -0.59
USP42-203ENST00000426246 GAR1Q9NY12 217 aaKnown RBP11.38□□□□□ -0.59
USP42-203ENST00000426246 ABI3Q9P2A4 366 aa11.38□□□□□ -0.59
USP42-203ENST00000426246 TUBD1Q9UJT1 453 aa11.38□□□□□ -0.59
USP42-203ENST00000426246 TLN1Q9Y490 2541 aaKnown RBP11.38□□□□□ -0.59
USP42-203ENST00000426246 LRRC3CA6NJW4 275 aa11.37□□□□□ -0.59
USP42-203ENST00000426246 NUDT19A8MXV4 375 aa11.37□□□□□ -0.59
USP42-203ENST00000426246 IFNA4P05014 189 aa11.37□□□□□ -0.59
USP42-203ENST00000426246 F2RP25116 425 aa11.37□□□□□ -0.59
USP42-203ENST00000426246 B3GALT5-AS1P59052 145 aa11.37□□□□□ -0.59
USP42-203ENST00000426246 PRR31Q5SQ13 230 aa11.37□□□□□ -0.59
USP42-203ENST00000426246 OR1L1Q8NH94 360 aa11.37□□□□□ -0.59
USP42-203ENST00000426246 MEGF10Q96KG7 1140 aa11.37□□□□□ -0.59
USP42-203ENST00000426246 GNG12Q9UBI6 72 aa11.37□□□□□ -0.59
USP42-203ENST00000426246 PGPEP1LA6NFU8 196 aa11.37□□□□□ -0.59
USP42-203ENST00000426246 OR5H1A6NKK0 313 aa11.37□□□□□ -0.59
USP42-203ENST00000426246 RAC2P15153 192 aa11.37□□□□□ -0.59
USP42-203ENST00000426246 NBL1P41271 181 aa11.37□□□□□ -0.59
USP42-203ENST00000426246 DEFA6Q01524 100 aa11.37□□□□□ -0.59
USP42-203ENST00000426246 IL15RAQ13261 267 aa11.37□□□□□ -0.59
USP42-203ENST00000426246 ZNF610Q8N9Z0 462 aa11.37□□□□□ -0.59
USP42-203ENST00000426246 LILRB1Q8NHL6 650 aaPredicted RBP11.37□□□□□ -0.59
USP42-203ENST00000426246 APOBEC3DQ96AK3 386 aaPredicted RBP11.37□□□□□ -0.59
USP42-203ENST00000426246 PATZ1Q9HBE1 687 aaKnown RBP11.37□□□□□ -0.59
USP42-203ENST00000426246 STRAPQ9Y3F4 350 aaKnown RBP11.37□□□□□ -0.59
USP42-203ENST00000426246 MAP1LC3B2A6NCE7 125 aa11.37□□□□□ -0.59
USP42-203ENST00000426246 SYNGR2O43760 224 aa11.37□□□□□ -0.59
USP42-203ENST00000426246 IFNA10P01566 189 aa11.37□□□□□ -0.59
USP42-203ENST00000426246 MPZP25189 248 aa11.37□□□□□ -0.59
USP42-203ENST00000426246 TMEM251Q8N6I4 163 aa11.37□□□□□ -0.59
USP42-203ENST00000426246 OR2M7Q8NG81 312 aa11.37□□□□□ -0.59
USP42-203ENST00000426246 FAM210BQ96KR6 192 aa11.37□□□□□ -0.59
USP42-203ENST00000426246 MAP1LC3BQ9GZQ8 125 aa11.37□□□□□ -0.59
USP42-203ENST00000426246 Q9N2K0 584 aa11.37□□□□□ -0.59
USP42-203ENST00000426246 KCNIP1Q9NZI2 227 aa11.37□□□□□ -0.59
USP42-203ENST00000426246 RAMP3O60896 148 aa11.36□□□□□ -0.59
USP42-203ENST00000426246 KCNMB1Q16558 191 aa11.36□□□□□ -0.59
USP42-203ENST00000426246 C18orf12Q96KH6 178 aa11.36□□□□□ -0.59
USP42-203ENST00000426246 OR4C12Q96R67 309 aa11.36□□□□□ -0.59
USP42-203ENST00000426246 TRIB1Q96RU8 372 aa11.36□□□□□ -0.59
USP42-203ENST00000426246 DLL3Q9NYJ7 618 aa11.36□□□□□ -0.59
USP42-203ENST00000426246 PSG11Q9UQ72 335 aa11.36□□□□□ -0.59
USP42-203ENST00000426246 ST8SIA5O15466 376 aa11.36□□□□□ -0.59
USP42-203ENST00000426246 PMELP40967 661 aa11.36□□□□□ -0.59
USP42-203ENST00000426246 FAM3BP58499 235 aaPredicted RBP11.36□□□□□ -0.59
USP42-203ENST00000426246 BATFQ16520 125 aa11.36□□□□□ -0.59
USP42-203ENST00000426246 RNF212Q495C1 297 aa11.36□□□□□ -0.59
USP42-203ENST00000426246 RBKSQ9H477 322 aa11.36□□□□□ -0.59
USP42-203ENST00000426246 DVL1O14640 695 aa11.36□□□□□ -0.59
USP42-203ENST00000426246 WISP2O76076 250 aa11.36□□□□□ -0.59
USP42-203ENST00000426246 MEOX1P50221 254 aa11.36□□□□□ -0.59
USP42-203ENST00000426246 RAB5CP51148 216 aa11.36□□□□□ -0.59
USP42-203ENST00000426246 ARL16Q0P5N6 197 aa11.36□□□□□ -0.59
USP42-203ENST00000426246 HMGN3Q15651 99 aa11.36□□□□□ -0.59
USP42-203ENST00000426246 Q3ZCU0 254 aa11.36□□□□□ -0.59
USP42-203ENST00000426246 DCAF10Q5QP82 559 aa11.36□□□□□ -0.59
USP42-203ENST00000426246 TMEM211Q6ICI0 200 aa11.36□□□□□ -0.59
USP42-203ENST00000426246 GGACTQ9BVM4 153 aa11.36□□□□□ -0.59
USP42-203ENST00000426246 TTTY12Q9BZ98 90 aa11.36□□□□□ -0.59
USP42-203ENST00000426246 FGF23Q9GZV9 251 aaPredicted RBP11.36□□□□□ -0.59
USP42-203ENST00000426246 IGHV3OR15-7A0A075B7D8 119 aa11.35□□□□□ -0.59
USP42-203ENST00000426246 TM4SF5O14894 197 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms