RNA–Protein interactions for RNA: ENST00000426155.6

SNX3-204, Transcript of sorting nexin 3, humanhuman

TSL 1 (best) BASIC

Gene SNX3, Length 1,072 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-204ENST00000426155 RTN4IP1Q8WWV3 396 aaPredicted RBP10.86□□□□□ -0.67
SNX3-204ENST00000426155 ST6GALNAC6Q969X2 333 aa10.86□□□□□ -0.67
SNX3-204ENST00000426155 PECRQ9BY49 303 aa10.86□□□□□ -0.67
SNX3-204ENST00000426155 KCNIP1Q9NZI2 227 aa10.86□□□□□ -0.67
SNX3-204ENST00000426155 MEGF8Q7Z7M0 2845 aa10.86□□□□□ -0.67
SNX3-204ENST00000426155 ZNF736B4DX44 427 aaPredicted RBP10.85□□□□□ -0.67
SNX3-204ENST00000426155 H3BUI4 141 aa10.85□□□□□ -0.67
SNX3-204ENST00000426155 M0QZ24 198 aa10.85□□□□□ -0.67
SNX3-204ENST00000426155 LPLP06858 475 aa10.85□□□□□ -0.67
SNX3-204ENST00000426155 CLEC2LP0C7M8 214 aa10.85□□□□□ -0.67
SNX3-204ENST00000426155 CD28P10747 220 aa10.85□□□□□ -0.67
SNX3-204ENST00000426155 TMEM11P17152 192 aa10.85□□□□□ -0.67
SNX3-204ENST00000426155 GALP22466 123 aa10.85□□□□□ -0.67
SNX3-204ENST00000426155 GADD45AP24522 165 aa10.85□□□□□ -0.67
SNX3-204ENST00000426155 VDAC2P45880 294 aaPredicted RBP10.85□□□□□ -0.67
SNX3-204ENST00000426155 MORN2Q502X0 79 aa10.85□□□□□ -0.67
SNX3-204ENST00000426155 ZNF880Q6PDB4 577 aa10.85□□□□□ -0.67
SNX3-204ENST00000426155 Q6ZTK2 550 aa10.85□□□□□ -0.67
SNX3-204ENST00000426155 C16orf82Q7Z2V1 217 aa10.85□□□□□ -0.67
SNX3-204ENST00000426155 OR8H3Q8N146 312 aa10.85□□□□□ -0.67
SNX3-204ENST00000426155 C8orf31Q8N9H6 132 aa10.85□□□□□ -0.67
SNX3-204ENST00000426155 IL1F10Q8WWZ1 152 aa10.85□□□□□ -0.67
SNX3-204ENST00000426155 CHCHD6Q9BRQ6 235 aa10.85□□□□□ -0.67
SNX3-204ENST00000426155 PARP12Q9H0J9 701 aaKnown RBP10.85□□□□□ -0.67
SNX3-204ENST00000426155 JPT1Q9UK76 154 aa10.85□□□□□ -0.67
SNX3-204ENST00000426155 LOC100506127A0A0U1RQW1 187 aa10.84□□□□□ -0.67
SNX3-204ENST00000426155 TRIM64CA6NLI5 447 aa10.84□□□□□ -0.67
SNX3-204ENST00000426155 GAPDHP04406 335 aaKnown RBP10.84□□□□□ -0.67
SNX3-204ENST00000426155 FAM106CPP0CH98 169 aa10.84□□□□□ -0.67
SNX3-204ENST00000426155 IL3RAP26951 378 aa10.84□□□□□ -0.67
SNX3-204ENST00000426155 FGF9P31371 208 aaPredicted RBP10.84□□□□□ -0.67
SNX3-204ENST00000426155 PSMD7P51665 324 aa10.84□□□□□ -0.67
SNX3-204ENST00000426155 TMEM30BQ3MIR4 351 aa10.84□□□□□ -0.67
SNX3-204ENST00000426155 Q3ZCU0 254 aa10.84□□□□□ -0.67
SNX3-204ENST00000426155 C9orf152Q5JTZ5 239 aa10.84□□□□□ -0.67
SNX3-204ENST00000426155 ODF3L1Q8IXM7 274 aa10.84□□□□□ -0.67
SNX3-204ENST00000426155 OR56B1Q8NGI3 324 aa10.84□□□□□ -0.67
SNX3-204ENST00000426155 WIPF2Q8TF74 440 aaPredicted RBP10.84□□□□□ -0.67
SNX3-204ENST00000426155 AKR1E2Q96JD6 320 aa10.84□□□□□ -0.67
SNX3-204ENST00000426155 ABHD14AQ9BUJ0 271 aa10.84□□□□□ -0.67
SNX3-204ENST00000426155 WNT10AQ9GZT5 417 aa10.84□□□□□ -0.67
SNX3-204ENST00000426155 RAB9BQ9NP90 201 aa10.84□□□□□ -0.67
SNX3-204ENST00000426155 C12orf4Q9NQ89 552 aa10.84□□□□□ -0.67
SNX3-204ENST00000426155 HSF4Q9ULV5 492 aa10.84□□□□□ -0.67
SNX3-204ENST00000426155 SSR3Q9UNL2 185 aa10.84□□□□□ -0.67
SNX3-204ENST00000426155 KCNK7Q9Y2U2 307 aa10.84□□□□□ -0.67
SNX3-204ENST00000426155 MOB4Q9Y3A3 225 aa10.84□□□□□ -0.67
SNX3-204ENST00000426155 A0A075B6Q4 140 aa10.83□□□□□ -0.68
SNX3-204ENST00000426155 ST8SIA5O15466 376 aa10.83□□□□□ -0.68
SNX3-204ENST00000426155 PEX14O75381 377 aa10.83□□□□□ -0.68
SNX3-204ENST00000426155 CD36P16671 472 aa10.83□□□□□ -0.68
SNX3-204ENST00000426155 SDC2P34741 201 aa10.83□□□□□ -0.68
SNX3-204ENST00000426155 TGFBR1P36897 503 aa10.83□□□□□ -0.68
SNX3-204ENST00000426155 OR3A3P47888 321 aa10.83□□□□□ -0.68
SNX3-204ENST00000426155 ZNF137PP52743 207 aa10.83□□□□□ -0.68
SNX3-204ENST00000426155 HLA-DRB3P79483 266 aa10.83□□□□□ -0.68
SNX3-204ENST00000426155 HTD2P86397 168 aa10.83□□□□□ -0.68
SNX3-204ENST00000426155 MXD1Q05195 221 aa10.83□□□□□ -0.68
SNX3-204ENST00000426155 C11orf88Q6PI97 169 aa10.83□□□□□ -0.68
SNX3-204ENST00000426155 C10orf99Q6UWK7 81 aa10.83□□□□□ -0.68
SNX3-204ENST00000426155 THNSL2Q86YJ6 484 aa10.83□□□□□ -0.68
SNX3-204ENST00000426155 TGIF2LXQ8IUE1 241 aa10.83□□□□□ -0.68
SNX3-204ENST00000426155 C5orf56Q8N8D9 126 aa10.83□□□□□ -0.68
SNX3-204ENST00000426155 FAM110DQ8TAY7 271 aaPredicted RBP10.83□□□□□ -0.68
SNX3-204ENST00000426155 BORCS5Q969J3 196 aa10.83□□□□□ -0.68
SNX3-204ENST00000426155 GALMQ96C23 342 aa10.83□□□□□ -0.68
SNX3-204ENST00000426155 EAF1Q96JC9 268 aaPredicted RBP10.83□□□□□ -0.68
SNX3-204ENST00000426155 CMSS1Q9BQ75 279 aaKnown RBP10.83□□□□□ -0.68
SNX3-204ENST00000426155 CENPOQ9BU64 300 aa10.83□□□□□ -0.68
SNX3-204ENST00000426155 PALMDQ9NP74 551 aa10.83□□□□□ -0.68
SNX3-204ENST00000426155 OR1A1Q9P1Q5 309 aa10.83□□□□□ -0.68
SNX3-204ENST00000426155 RAB22AQ9UL26 194 aa10.83□□□□□ -0.68
SNX3-204ENST00000426155 NOTOA8MTQ0 251 aa10.82□□□□□ -0.68
SNX3-204ENST00000426155 YPEL1O60688 119 aa10.82□□□□□ -0.68
SNX3-204ENST00000426155 FBXO24O75426 580 aa10.82□□□□□ -0.68
SNX3-204ENST00000426155 HNRNPCP07910 306 aaKnown RBP eCLIP10.82□□□□□ -0.68
SNX3-204ENST00000426155 SCTP09683 121 aa10.82□□□□□ -0.68
SNX3-204ENST00000426155 SNRPBP14678 240 aaKnown RBP10.82□□□□□ -0.68
SNX3-204ENST00000426155 GNB3P16520 340 aa10.82□□□□□ -0.68
SNX3-204ENST00000426155 MOB1BQ7L9L4 216 aa10.82□□□□□ -0.68
SNX3-204ENST00000426155 IZUMO1Q8IYV9 350 aa10.82□□□□□ -0.68
SNX3-204ENST00000426155 Q8N6K4 173 aa10.82□□□□□ -0.68
SNX3-204ENST00000426155 MAFIPQ8WZ33 124 aa10.82□□□□□ -0.68
SNX3-204ENST00000426155 RAB3CQ96E17 227 aa10.82□□□□□ -0.68
SNX3-204ENST00000426155 YPEL2Q96QA6 119 aa10.82□□□□□ -0.68
SNX3-204ENST00000426155 CITED2Q99967 270 aaPredicted RBP10.82□□□□□ -0.68
SNX3-204ENST00000426155 MRPL20Q9BYC9 149 aaKnown RBP10.82□□□□□ -0.68
SNX3-204ENST00000426155 IFI27L2Q9H2X8 130 aa10.82□□□□□ -0.68
SNX3-204ENST00000426155 Q9N2K0 584 aa10.82□□□□□ -0.68
SNX3-204ENST00000426155 ABRACLQ9P1F3 81 aa10.82□□□□□ -0.68
SNX3-204ENST00000426155 DAPK2Q9UIK4 370 aa10.82□□□□□ -0.68
SNX3-204ENST00000426155 ELF5Q9UKW6 265 aaPredicted RBP10.82□□□□□ -0.68
SNX3-204ENST00000426155 SAA2-SAA4A0A096LPE2 208 aa10.81□□□□□ -0.68
SNX3-204ENST00000426155 TRBV6-6A0A0A6YYG2 114 aa10.81□□□□□ -0.68
SNX3-204ENST00000426155 IGKV1-6A0A0C4DH72 117 aa10.81□□□□□ -0.68
SNX3-204ENST00000426155 RAB27BO00194 218 aa10.81□□□□□ -0.68
SNX3-204ENST00000426155 MFNGO00587 321 aa10.81□□□□□ -0.68
SNX3-204ENST00000426155 SAA2P0DJI9 122 aaPredicted RBP10.81□□□□□ -0.68
SNX3-204ENST00000426155 RAB6AP20340 208 aa10.81□□□□□ -0.68
SNX3-204ENST00000426155 C2orf68Q2NKX9 166 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms