RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 WI2-2373I1.2A0A1W2PRP0 233 aa10.27□□□□□ -0.77
VRK3-203ENST00000424804 TCRBV4S1A1TA0A5B7 111 aa10.27□□□□□ -0.77
VRK3-203ENST00000424804 IFITM5A6NNB3 132 aa10.27□□□□□ -0.77
VRK3-203ENST00000424804 OOSP1A8MZH6 123 aa10.27□□□□□ -0.77
VRK3-203ENST00000424804 SNRNP70P08621 437 aaKnown RBP10.27□□□□□ -0.77
VRK3-203ENST00000424804 CD37P11049 281 aa10.27□□□□□ -0.77
VRK3-203ENST00000424804 CD36P16671 472 aa10.27□□□□□ -0.77
VRK3-203ENST00000424804 CD33P20138 364 aa10.27□□□□□ -0.77
VRK3-203ENST00000424804 GADD45AP24522 165 aa10.27□□□□□ -0.77
VRK3-203ENST00000424804 PPP1CCP36873 323 aaKnown RBP10.27□□□□□ -0.77
VRK3-203ENST00000424804 RAB7AP51149 207 aa10.27□□□□□ -0.77
VRK3-203ENST00000424804 MRPS15P82914 257 aaKnown RBP10.27□□□□□ -0.77
VRK3-203ENST00000424804 GNMTQ14749 295 aa10.27□□□□□ -0.77
VRK3-203ENST00000424804 OR56B1Q8NGI3 324 aa10.27□□□□□ -0.77
VRK3-203ENST00000424804 AKR1E2Q96JD6 320 aa10.27□□□□□ -0.77
VRK3-203ENST00000424804 RNF167Q9H6Y7 350 aa10.27□□□□□ -0.77
VRK3-203ENST00000424804 VCX3AQ9NNX9 186 aa10.27□□□□□ -0.77
VRK3-203ENST00000424804 RAB22AQ9UL26 194 aa10.27□□□□□ -0.77
VRK3-203ENST00000424804 TENM3Q9P273 2699 aa10.27□□□□□ -0.77
VRK3-203ENST00000424804 TNFAIP8O95379 198 aa10.26□□□□□ -0.77
VRK3-203ENST00000424804 GAPDHP04406 335 aaKnown RBP10.26□□□□□ -0.77
VRK3-203ENST00000424804 FAM106CPP0CH98 169 aa10.26□□□□□ -0.77
VRK3-203ENST00000424804 TMEM11P17152 192 aa10.26□□□□□ -0.77
VRK3-203ENST00000424804 GALP22466 123 aa10.26□□□□□ -0.77
VRK3-203ENST00000424804 EGFEM1PQ0D2K5 195 aa10.26□□□□□ -0.77
VRK3-203ENST00000424804 C18orf65Q6ZTR6 163 aa10.26□□□□□ -0.77
VRK3-203ENST00000424804 GAPTQ8N292 157 aa10.26□□□□□ -0.77
VRK3-203ENST00000424804 LINC00482Q8N8I6 264 aa10.26□□□□□ -0.77
VRK3-203ENST00000424804 TSPAN14Q8NG11 270 aa10.26□□□□□ -0.77
VRK3-203ENST00000424804 GALMQ96C23 342 aa10.26□□□□□ -0.77
VRK3-203ENST00000424804 KCTD7Q96MP8 289 aa10.26□□□□□ -0.77
VRK3-203ENST00000424804 CMSS1Q9BQ75 279 aaKnown RBP10.26□□□□□ -0.77
VRK3-203ENST00000424804 PECRQ9BY49 303 aa10.26□□□□□ -0.77
VRK3-203ENST00000424804 ATG5Q9H1Y0 275 aa10.26□□□□□ -0.77
VRK3-203ENST00000424804 MBNL3Q9NUK0 354 aaKnown RBP10.26□□□□□ -0.77
VRK3-203ENST00000424804 DAPK2Q9UIK4 370 aa10.26□□□□□ -0.77
VRK3-203ENST00000424804 A0A087WXM4 84 aa10.25□□□□□ -0.77
VRK3-203ENST00000424804 IGHV1-3A0A0C4DH29 117 aa10.25□□□□□ -0.77
VRK3-203ENST00000424804 A0A1W2PPI3 338 aa10.25□□□□□ -0.77
VRK3-203ENST00000424804 IGKV1D-33P01593 117 aa10.25□□□□□ -0.77
VRK3-203ENST00000424804 IGKV1-33P01594 117 aa10.25□□□□□ -0.77
VRK3-203ENST00000424804 CD3GP09693 182 aa10.25□□□□□ -0.77
VRK3-203ENST00000424804 CLEC2LP0C7M8 214 aa10.25□□□□□ -0.77
VRK3-203ENST00000424804 FGF9P31371 208 aaPredicted RBP10.25□□□□□ -0.77
VRK3-203ENST00000424804 SDC2P34741 201 aa10.25□□□□□ -0.77
VRK3-203ENST00000424804 TMEM30BQ3MIR4 351 aa10.25□□□□□ -0.77
VRK3-203ENST00000424804 MOGAT2Q3SYC2 334 aa10.25□□□□□ -0.77
VRK3-203ENST00000424804 CT45A1Q5HYN5 189 aa10.25□□□□□ -0.77
VRK3-203ENST00000424804 C11orf87Q6NUJ2 197 aa10.25□□□□□ -0.77
VRK3-203ENST00000424804 NR2C2APQ86WQ0 139 aa10.25□□□□□ -0.77
VRK3-203ENST00000424804 THNSL2Q86YJ6 484 aa10.25□□□□□ -0.77
VRK3-203ENST00000424804 TGIF2LXQ8IUE1 241 aa10.25□□□□□ -0.77
VRK3-203ENST00000424804 FAM89BQ8N5H3 189 aa10.25□□□□□ -0.77
VRK3-203ENST00000424804 CT45A3Q8NHU0 189 aa10.25□□□□□ -0.77
VRK3-203ENST00000424804 RAB3CQ96E17 227 aa10.25□□□□□ -0.77
VRK3-203ENST00000424804 HUWE1Q7Z6Z7 4374 aaKnown RBP10.25□□□□□ -0.77
VRK3-203ENST00000424804 METTL21EPA6NDL7 271 aa10.24□□□□□ -0.77
VRK3-203ENST00000424804 NOTOA8MTQ0 251 aa10.24□□□□□ -0.77
VRK3-203ENST00000424804 LDLRAD4O15165 306 aa10.24□□□□□ -0.77
VRK3-203ENST00000424804 HSPA12AO43301 675 aa10.24□□□□□ -0.77
VRK3-203ENST00000424804 RGS11O94810 467 aa10.24□□□□□ -0.77
VRK3-203ENST00000424804 NAPSAO96009 420 aa10.24□□□□□ -0.77
VRK3-203ENST00000424804 GNB3P16520 340 aa10.24□□□□□ -0.77
VRK3-203ENST00000424804 ZNF134P52741 427 aa10.24□□□□□ -0.77
VRK3-203ENST00000424804 TMEM50BP56557 158 aa10.24□□□□□ -0.77
VRK3-203ENST00000424804 LSM3P62310 102 aaKnown RBP10.24□□□□□ -0.77
VRK3-203ENST00000424804 HLA-DRB3P79483 266 aa10.24□□□□□ -0.77
VRK3-203ENST00000424804 HMGN3Q15651 99 aa10.24□□□□□ -0.77
VRK3-203ENST00000424804 MORN2Q502X0 79 aa10.24□□□□□ -0.77
VRK3-203ENST00000424804 PLAC9Q5JTB6 97 aa10.24□□□□□ -0.77
VRK3-203ENST00000424804 SLC25A48Q6ZT89 311 aaKnown RBP10.24□□□□□ -0.77
VRK3-203ENST00000424804 MRPL41Q8IXM3 137 aaKnown RBP10.24□□□□□ -0.77
VRK3-203ENST00000424804 OR8H3Q8N146 312 aa10.24□□□□□ -0.77
VRK3-203ENST00000424804 LINC00311Q8N616 119 aa10.24□□□□□ -0.77
VRK3-203ENST00000424804 OR2AK2Q8NG84 335 aa10.24□□□□□ -0.77
VRK3-203ENST00000424804 OR10R2Q8NGX6 335 aa10.24□□□□□ -0.77
VRK3-203ENST00000424804 RTN4IP1Q8WWV3 396 aaPredicted RBP10.24□□□□□ -0.77
VRK3-203ENST00000424804 RBMXL1Q96E39 390 aaKnown RBP10.24□□□□□ -0.77
VRK3-203ENST00000424804 RCC1LQ96I51 464 aaKnown RBP10.24□□□□□ -0.77
VRK3-203ENST00000424804 CENPOQ9BU64 300 aa10.24□□□□□ -0.77
VRK3-203ENST00000424804 ABHD14AQ9BUJ0 271 aa10.24□□□□□ -0.77
VRK3-203ENST00000424804 RIMS4Q9H426 269 aaPredicted RBP10.24□□□□□ -0.77
VRK3-203ENST00000424804 C12orf4Q9NQ89 552 aa10.24□□□□□ -0.77
VRK3-203ENST00000424804 SLC23A1Q9UHI7 598 aa10.24□□□□□ -0.77
VRK3-203ENST00000424804 JPT1Q9UK76 154 aa10.24□□□□□ -0.77
VRK3-203ENST00000424804 HSF4Q9ULV5 492 aa10.24□□□□□ -0.77
VRK3-203ENST00000424804 LINC01548A6NM66 108 aa10.23□□□□□ -0.77
VRK3-203ENST00000424804 NCBP2LA6PVI3 153 aaKnown RBP10.23□□□□□ -0.77
VRK3-203ENST00000424804 FOXI3A8MTJ6 420 aaPredicted RBP10.23□□□□□ -0.77
VRK3-203ENST00000424804 PF4V1P10720 104 aa10.23□□□□□ -0.77
VRK3-203ENST00000424804 SNRPBP14678 240 aaKnown RBP10.23□□□□□ -0.77
VRK3-203ENST00000424804 HTD2P86397 168 aa10.23□□□□□ -0.77
VRK3-203ENST00000424804 ZNF816Q0VGE8 651 aaPredicted RBP10.23□□□□□ -0.77
VRK3-203ENST00000424804 ARFRP1Q13795 201 aa10.23□□□□□ -0.77
VRK3-203ENST00000424804 IDNKQ5T6J7 187 aa10.23□□□□□ -0.77
VRK3-203ENST00000424804 SFXN4Q6P4A7 337 aa10.23□□□□□ -0.77
VRK3-203ENST00000424804 MOB1BQ7L9L4 216 aa10.23□□□□□ -0.77
VRK3-203ENST00000424804 ZNF554Q86TJ5 538 aa10.23□□□□□ -0.77
VRK3-203ENST00000424804 ZNF329Q86UD4 541 aa10.23□□□□□ -0.77
VRK3-203ENST00000424804 TPRA1Q86W33 373 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms