RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 AP3S2P59780 193 aa10.98□□□□□ -0.65
PRPF39-202ENST00000424478 PHLDA2Q53GA4 152 aa10.98□□□□□ -0.65
PRPF39-202ENST00000424478 CT45A1Q5HYN5 189 aa10.98□□□□□ -0.65
PRPF39-202ENST00000424478 LDLRAD2Q5SZI1 272 aa10.98□□□□□ -0.65
PRPF39-202ENST00000424478 RUSC1-AS1Q66K80 236 aa10.98□□□□□ -0.65
PRPF39-202ENST00000424478 CT45A3Q8NHU0 189 aa10.98□□□□□ -0.65
PRPF39-202ENST00000424478 C8orf46Q8TAG6 207 aa10.98□□□□□ -0.65
PRPF39-202ENST00000424478 TBX15Q96SF7 602 aa10.98□□□□□ -0.65
PRPF39-202ENST00000424478 FXYD6Q9H0Q3 95 aa10.98□□□□□ -0.65
PRPF39-202ENST00000424478 C7orf69Q9H7B7 122 aa10.98□□□□□ -0.65
PRPF39-202ENST00000424478 CCL28Q9NRJ3 127 aa10.98□□□□□ -0.65
PRPF39-202ENST00000424478 PRR13Q9NZ81 148 aa10.98□□□□□ -0.65
PRPF39-202ENST00000424478 NF1P21359 2839 aa10.97□□□□□ -0.65
PRPF39-202ENST00000424478 C17orf98A8MV24 154 aa10.97□□□□□ -0.65
PRPF39-202ENST00000424478 B4DSR2 109 aa10.97□□□□□ -0.65
PRPF39-202ENST00000424478 F2RL2O00254 374 aa10.97□□□□□ -0.65
PRPF39-202ENST00000424478 RPL39P5Q59GN2 51 aa10.97□□□□□ -0.65
PRPF39-202ENST00000424478 BRD3OSQ6XYD6 125 aa10.97□□□□□ -0.65
PRPF39-202ENST00000424478 Q6ZS49 121 aa10.97□□□□□ -0.65
PRPF39-202ENST00000424478 H1FOOQ8IZA3 346 aaPredicted RBP10.97□□□□□ -0.65
PRPF39-202ENST00000424478 TMEM186Q96B77 213 aa10.97□□□□□ -0.65
PRPF39-202ENST00000424478 C5orf30Q96GV9 206 aa10.97□□□□□ -0.65
PRPF39-202ENST00000424478 NUDT15Q9NV35 164 aa10.97□□□□□ -0.65
PRPF39-202ENST00000424478 INSIG2Q9Y5U4 225 aa10.97□□□□□ -0.65
PRPF39-202ENST00000424478 NIPBLQ6KC79 2804 aaeCLIP10.97□□□□□ -0.65
PRPF39-202ENST00000424478 RNASEK-C17orf49H0YIS7 233 aa10.97□□□□□ -0.65
PRPF39-202ENST00000424478 GPR37O15354 613 aa10.97□□□□□ -0.65
PRPF39-202ENST00000424478 PLA1AQ53H76 456 aa10.97□□□□□ -0.65
PRPF39-202ENST00000424478 VAX1Q5SQQ9 334 aa10.97□□□□□ -0.65
PRPF39-202ENST00000424478 ABHD12Q8N2K0 398 aa10.97□□□□□ -0.65
PRPF39-202ENST00000424478 ADAD2Q8NCV1 583 aaKnown RBP10.97□□□□□ -0.65
PRPF39-202ENST00000424478 CAPSLQ8WWF8 208 aa10.97□□□□□ -0.65
PRPF39-202ENST00000424478 OR2D2Q9H210 308 aa10.97□□□□□ -0.65
PRPF39-202ENST00000424478 TAS2R3Q9NYW6 316 aa10.97□□□□□ -0.65
PRPF39-202ENST00000424478 VSIG4Q9Y279 399 aa10.97□□□□□ -0.65
PRPF39-202ENST00000424478 ANK3Q12955 4377 aaKnown RBP10.97□□□□□ -0.65
PRPF39-202ENST00000424478 SSBP1Q04837 148 aaKnown RBP10.96□□□□□ -0.65
PRPF39-202ENST00000424478 LHFPL4Q7Z7J7 247 aa10.96□□□□□ -0.65
PRPF39-202ENST00000424478 LINC01356Q8N9X3 169 aa10.96□□□□□ -0.65
PRPF39-202ENST00000424478 ENKURQ8TC29 256 aa10.96□□□□□ -0.65
PRPF39-202ENST00000424478 UPRTQ96BW1 309 aa10.96□□□□□ -0.65
PRPF39-202ENST00000424478 SIRPDQ9H106 197 aa10.96□□□□□ -0.65
PRPF39-202ENST00000424478 CENPXA8MT69 81 aa10.96□□□□□ -0.66
PRPF39-202ENST00000424478 VGLL3A8MV65 326 aa10.96□□□□□ -0.66
PRPF39-202ENST00000424478 DISC1C4P0D8 188 aa10.96□□□□□ -0.66
PRPF39-202ENST00000424478 ARPC1BO15143 372 aaKnown RBP10.96□□□□□ -0.66
PRPF39-202ENST00000424478 RLN1P04808 185 aa10.96□□□□□ -0.66
PRPF39-202ENST00000424478 IGHV4-38-2P0DP08 117 aa10.96□□□□□ -0.66
PRPF39-202ENST00000424478 MMP9P14780 707 aa10.96□□□□□ -0.66
PRPF39-202ENST00000424478 ANXA7P20073 488 aaKnown RBP10.96□□□□□ -0.66
PRPF39-202ENST00000424478 HCP5Q6MZN7 132 aa10.96□□□□□ -0.66
PRPF39-202ENST00000424478 LYG1Q8N1E2 194 aa10.96□□□□□ -0.66
PRPF39-202ENST00000424478 TMEM133Q9H2Q1 129 aa10.96□□□□□ -0.66
PRPF39-202ENST00000424478 IGHV2-26A0A0B4J1V2 119 aa10.96□□□□□ -0.66
PRPF39-202ENST00000424478 TRAV40A0A0B4J280 105 aa10.96□□□□□ -0.66
PRPF39-202ENST00000424478 PGAM2P15259 253 aa10.96□□□□□ -0.66
PRPF39-202ENST00000424478 HERV-K104P61576 105 aa10.96□□□□□ -0.66
PRPF39-202ENST00000424478 OR2B11Q5JQS5 317 aa10.96□□□□□ -0.66
PRPF39-202ENST00000424478 ZNF818PQ6ZRF7 136 aa10.96□□□□□ -0.66
PRPF39-202ENST00000424478 OR2AK2Q8NG84 335 aa10.96□□□□□ -0.66
PRPF39-202ENST00000424478 TERB2Q8NHR7 220 aa10.96□□□□□ -0.66
PRPF39-202ENST00000424478 TNFRSF14Q92956 283 aa10.96□□□□□ -0.66
PRPF39-202ENST00000424478 SLC6A1P30531 599 aa10.95□□□□□ -0.66
PRPF39-202ENST00000424478 DEFA1P59665 94 aa10.95□□□□□ -0.66
PRPF39-202ENST00000424478 DEFA3P59666 94 aa10.95□□□□□ -0.66
PRPF39-202ENST00000424478 MEF2DQ14814 521 aa10.95□□□□□ -0.66
PRPF39-202ENST00000424478 RGS21Q2M5E4 152 aa10.95□□□□□ -0.66
PRPF39-202ENST00000424478 SLC5A7Q9GZV3 580 aa10.95□□□□□ -0.66
PRPF39-202ENST00000424478 OR2W1Q9Y3N9 320 aa10.95□□□□□ -0.66
PRPF39-202ENST00000424478 HOXB4P17483 251 aaPredicted RBP10.95□□□□□ -0.66
PRPF39-202ENST00000424478 FAUP35544 74 aaKnown RBP10.95□□□□□ -0.66
PRPF39-202ENST00000424478 HTD2P86397 168 aa10.95□□□□□ -0.66
PRPF39-202ENST00000424478 SRSF7Q16629 238 aaKnown RBP eCLIP10.95□□□□□ -0.66
PRPF39-202ENST00000424478 DHRS11Q6UWP2 260 aa10.95□□□□□ -0.66
PRPF39-202ENST00000424478 GLDNQ6ZMI3 551 aaPredicted RBP10.95□□□□□ -0.66
PRPF39-202ENST00000424478 LPAR3Q9UBY5 353 aa10.95□□□□□ -0.66
PRPF39-202ENST00000424478 SESN1Q9Y6P5 492 aa10.95□□□□□ -0.66
PRPF39-202ENST00000424478 hCG_2014768A0A024R1R8 64 aa10.94□□□□□ -0.66
PRPF39-202ENST00000424478 A0A1B0GVG6 124 aa10.94□□□□□ -0.66
PRPF39-202ENST00000424478 PROP1O75360 226 aa10.94□□□□□ -0.66
PRPF39-202ENST00000424478 TUSC2O75896 110 aa10.94□□□□□ -0.66
PRPF39-202ENST00000424478 IGLV2-14P01704 120 aa10.94□□□□□ -0.66
PRPF39-202ENST00000424478 TCRBP04435 133 aa10.94□□□□□ -0.66
PRPF39-202ENST00000424478 Q3ZCU0 254 aa10.94□□□□□ -0.66
PRPF39-202ENST00000424478 TRAT1Q6PIZ9 186 aa10.94□□□□□ -0.66
PRPF39-202ENST00000424478 CCBE1Q6UXH8 406 aaPredicted RBP10.94□□□□□ -0.66
PRPF39-202ENST00000424478 LHFPL1Q86WI0 220 aa10.94□□□□□ -0.66
PRPF39-202ENST00000424478 AGMATQ9BSE5 352 aa10.94□□□□□ -0.66
PRPF39-202ENST00000424478 ABHD14AQ9BUJ0 271 aa10.94□□□□□ -0.66
PRPF39-202ENST00000424478 IFI27L2Q9H2X8 130 aa10.94□□□□□ -0.66
PRPF39-202ENST00000424478 METTL8Q9H825 291 aaKnown RBP10.94□□□□□ -0.66
PRPF39-202ENST00000424478 JPT1Q9UK76 154 aa10.94□□□□□ -0.66
PRPF39-202ENST00000424478 NSD1Q96L73 2696 aaPredicted RBP10.94□□□□□ -0.66
PRPF39-202ENST00000424478 HIVEP2P31629 2446 aa10.94□□□□□ -0.66
PRPF39-202ENST00000424478 ARG1P05089 322 aa10.94□□□□□ -0.66
PRPF39-202ENST00000424478 AKR1C4P17516 323 aa10.94□□□□□ -0.66
PRPF39-202ENST00000424478 GNRHRP30968 328 aa10.94□□□□□ -0.66
PRPF39-202ENST00000424478 UBE2MP61081 183 aaKnown RBP10.94□□□□□ -0.66
PRPF39-202ENST00000424478 ACTBL2Q562R1 376 aa10.94□□□□□ -0.66
PRPF39-202ENST00000424478 ARRDC1Q8N5I2 433 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms