RNA–Protein interactions for RNA: ENST00000424354.5

SREBF2-202, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

TSL 1 (best)

Gene SREBF2, Length 5,699 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-202ENST00000424354 RUNX1Q01196 453 aa12.02□□□□□ -0.48
SREBF2-202ENST00000424354 C1orf100Q5SVJ3 147 aa12.02□□□□□ -0.48
SREBF2-202ENST00000424354 PCOLCE2Q9UKZ9 415 aa12.02□□□□□ -0.48
SREBF2-202ENST00000424354 CDIPTO14735 213 aa12.02□□□□□ -0.48
SREBF2-202ENST00000424354 NAT2P11245 290 aa12.02□□□□□ -0.48
SREBF2-202ENST00000424354 OR11H4Q8NGC9 324 aa12.02□□□□□ -0.48
SREBF2-202ENST00000424354 FLYWCH2Q96CP2 140 aaKnown RBP12.02□□□□□ -0.48
SREBF2-202ENST00000424354 SMIM12Q96EX1 92 aa12.02□□□□□ -0.48
SREBF2-202ENST00000424354 MBD1Q9UIS9 605 aaPredicted RBP12.02□□□□□ -0.48
SREBF2-202ENST00000424354 KLF7O75840 302 aaPredicted RBP12.02□□□□□ -0.49
SREBF2-202ENST00000424354 HLA-DQA1P01909 254 aa12.02□□□□□ -0.49
SREBF2-202ENST00000424354 RFLNBQ8N5W9 214 aa12.02□□□□□ -0.49
SREBF2-202ENST00000424354 AQP3Q92482 292 aa12.02□□□□□ -0.49
SREBF2-202ENST00000424354 HDHD3Q9BSH5 251 aaPredicted RBP12.02□□□□□ -0.49
SREBF2-202ENST00000424354 RALYQ9UKM9 306 aaKnown RBP12.02□□□□□ -0.49
SREBF2-202ENST00000424354 GNG7O60262 68 aa12.02□□□□□ -0.49
SREBF2-202ENST00000424354 ROM1Q03395 351 aa12.02□□□□□ -0.49
SREBF2-202ENST00000424354 NPVFQ9HCQ7 196 aa12.02□□□□□ -0.49
SREBF2-202ENST00000424354 NCOR1O75376 2440 aa12.02□□□□□ -0.49
SREBF2-202ENST00000424354 HRKO00198 91 aa12.02□□□□□ -0.49
SREBF2-202ENST00000424354 ISG15P05161 165 aa12.02□□□□□ -0.49
SREBF2-202ENST00000424354 OR1L8Q8NGR8 309 aa12.02□□□□□ -0.49
SREBF2-202ENST00000424354 CISD1Q9NZ45 108 aaKnown RBP12.02□□□□□ -0.49
SREBF2-202ENST00000424354 LCTP09848 1927 aa12.01□□□□□ -0.49
SREBF2-202ENST00000424354 NINQ8N4C6 2090 aa12.01□□□□□ -0.49
SREBF2-202ENST00000424354 LOC102724200A0A096LPH7 203 aaPredicted RBP12.01□□□□□ -0.49
SREBF2-202ENST00000424354 TRBV5-7A0A0A0MS05 114 aa12.01□□□□□ -0.49
SREBF2-202ENST00000424354 GAGE10A6NGK3 116 aa12.01□□□□□ -0.49
SREBF2-202ENST00000424354 DLL1O00548 723 aa12.01□□□□□ -0.49
SREBF2-202ENST00000424354 DXOO77932 396 aaKnown RBP12.01□□□□□ -0.49
SREBF2-202ENST00000424354 P2RY4P51582 365 aa12.01□□□□□ -0.49
SREBF2-202ENST00000424354 MFAP2P55001 183 aa12.01□□□□□ -0.49
SREBF2-202ENST00000424354 GBGT1Q8N5D6 347 aa12.01□□□□□ -0.49
SREBF2-202ENST00000424354 SNRNP40Q96DI7 357 aaKnown RBP12.01□□□□□ -0.49
SREBF2-202ENST00000424354 ZNF71Q9NQZ8 489 aaPredicted RBP12.01□□□□□ -0.49
SREBF2-202ENST00000424354 CLN8Q9UBY8 286 aa12.01□□□□□ -0.49
SREBF2-202ENST00000424354 SF3B6Q9Y3B4 125 aaKnown RBP12.01□□□□□ -0.49
SREBF2-202ENST00000424354 A8MWL6 223 aa12.01□□□□□ -0.49
SREBF2-202ENST00000424354 OR4A8P0C604 315 aa12.01□□□□□ -0.49
SREBF2-202ENST00000424354 COL9A1P20849 921 aa12.01□□□□□ -0.49
SREBF2-202ENST00000424354 DLX1P56177 255 aa12.01□□□□□ -0.49
SREBF2-202ENST00000424354 CCL17Q92583 94 aa12.01□□□□□ -0.49
SREBF2-202ENST00000424354 AURKAIP1Q9NWT8 199 aaPredicted RBP12.01□□□□□ -0.49
SREBF2-202ENST00000424354 METTL1Q9UBP6 276 aaKnown RBP12.01□□□□□ -0.49
SREBF2-202ENST00000424354 NGFRP08138 427 aa12.01□□□□□ -0.49
SREBF2-202ENST00000424354 CELA2BP08218 269 aaPredicted RBP12.01□□□□□ -0.49
SREBF2-202ENST00000424354 Q8WTZ3 238 aa12.01□□□□□ -0.49
SREBF2-202ENST00000424354 NUDT16L1Q9BRJ7 211 aaKnown RBP12.01□□□□□ -0.49
SREBF2-202ENST00000424354 PCGF1Q9BSM1 259 aa12.01□□□□□ -0.49
SREBF2-202ENST00000424354 FRMPD3Q5JV73 1810 aa12.01□□□□□ -0.49
SREBF2-202ENST00000424354 HPRT1P00492 218 aa12.01□□□□□ -0.49
SREBF2-202ENST00000424354 MDKP21741 143 aaPredicted RBP12.01□□□□□ -0.49
SREBF2-202ENST00000424354 WDR74Q6RFH5 385 aaPredicted RBP12.01□□□□□ -0.49
SREBF2-202ENST00000424354 DDA1Q9BW61 102 aa12.01□□□□□ -0.49
SREBF2-202ENST00000424354 CLEC5AQ9NY25 188 aa12.01□□□□□ -0.49
SREBF2-202ENST00000424354 KCNE5Q9UJ90 142 aa12.01□□□□□ -0.49
SREBF2-202ENST00000424354 MYOFQ9NZM1 2061 aa12□□□□□ -0.49
SREBF2-202ENST00000424354 OR2A4O95047 310 aa12□□□□□ -0.49
SREBF2-202ENST00000424354 COX7A1P24310 79 aa12□□□□□ -0.49
SREBF2-202ENST00000424354 GABRA6Q16445 453 aa12□□□□□ -0.49
SREBF2-202ENST00000424354 OR2A7Q96R45 310 aa12□□□□□ -0.49
SREBF2-202ENST00000424354 IGHV3-13P01766 116 aa12□□□□□ -0.49
SREBF2-202ENST00000424354 IGHV3-7P01780 117 aa12□□□□□ -0.49
SREBF2-202ENST00000424354 EPHA8P29322 1005 aaPredicted RBP12□□□□□ -0.49
SREBF2-202ENST00000424354 OR2I1PQ8NGU4 316 aa12□□□□□ -0.49
SREBF2-202ENST00000424354 PAXXQ9BUH6 204 aa12□□□□□ -0.49
SREBF2-202ENST00000424354 ASCL3Q9NQ33 180 aa12□□□□□ -0.49
SREBF2-202ENST00000424354 DGAT2L7PQ6IED9 249 aa12□□□□□ -0.49
SREBF2-202ENST00000424354 NRTNQ99748 197 aa12□□□□□ -0.49
SREBF2-202ENST00000424354 PXMP4Q9Y6I8 212 aa12□□□□□ -0.49
SREBF2-202ENST00000424354 IGHV1OR15-9A0A0B4J2B8 117 aa12□□□□□ -0.49
SREBF2-202ENST00000424354 H2BFSP57053 126 aa12□□□□□ -0.49
SREBF2-202ENST00000424354 SRSF5Q13243 272 aaKnown RBP12□□□□□ -0.49
SREBF2-202ENST00000424354 HIST1H2BAQ96A08 127 aa12□□□□□ -0.49
SREBF2-202ENST00000424354 TGIF2-C20orf24A0A0A6YYL0 155 aa12□□□□□ -0.49
SREBF2-202ENST00000424354 TMEM238LA0A1B0GVL6 79 aa12□□□□□ -0.49
SREBF2-202ENST00000424354 FAM90A10PA6NDY2 464 aa12□□□□□ -0.49
SREBF2-202ENST00000424354 FAM90A18PA6NE21 464 aa12□□□□□ -0.49
SREBF2-202ENST00000424354 FAM90A16PA6NEW6 464 aa12□□□□□ -0.49
SREBF2-202ENST00000424354 FAM90A20PA6NIJ5 464 aa12□□□□□ -0.49
SREBF2-202ENST00000424354 FAM90A8PA6NJQ4 464 aa12□□□□□ -0.49
SREBF2-202ENST00000424354 A6NJY4 79 aa12□□□□□ -0.49
SREBF2-202ENST00000424354 FAM90A7PA6NKC0 464 aa12□□□□□ -0.49
SREBF2-202ENST00000424354 FAM90A22PA8MWA6 464 aa12□□□□□ -0.49
SREBF2-202ENST00000424354 FAM90A12PA8MX19 464 aa12□□□□□ -0.49
SREBF2-202ENST00000424354 FAM90A5PA8MXJ8 464 aa12□□□□□ -0.49
SREBF2-202ENST00000424354 FAM90A23PA8MXZ1 464 aa12□□□□□ -0.49
SREBF2-202ENST00000424354 NDUFB4O95168 129 aa12□□□□□ -0.49
SREBF2-202ENST00000424354 FAM90A15PP0C7V4 464 aa12□□□□□ -0.49
SREBF2-202ENST00000424354 FAM90A13PP0C7W8 464 aa12□□□□□ -0.49
SREBF2-202ENST00000424354 FAM90A14PP0C7W9 464 aa12□□□□□ -0.49
SREBF2-202ENST00000424354 FAM90A24PP0C7X0 464 aa12□□□□□ -0.49
SREBF2-202ENST00000424354 FABP2P12104 132 aa12□□□□□ -0.49
SREBF2-202ENST00000424354 KLK2P20151 261 aa12□□□□□ -0.49
SREBF2-202ENST00000424354 UNQ9370/PRO34162Q6UXP9 181 aa12□□□□□ -0.49
SREBF2-202ENST00000424354 OR2Y1Q8NGV0 311 aa12□□□□□ -0.49
SREBF2-202ENST00000424354 HARBI1Q96MB7 349 aa12□□□□□ -0.49
SREBF2-202ENST00000424354 CENPVL1A0A0U1RR11 272 aa11.99□□□□□ -0.49
SREBF2-202ENST00000424354 NPIPB9F8W1W9 429 aa11.99□□□□□ -0.49
SREBF2-202ENST00000424354 J3QR06 171 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms