RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 RNF167Q9H6Y7 350 aa4.62□□□□□ -1.67
SDCBP-203ENST00000424270 RAB9BQ9NP90 201 aa4.62□□□□□ -1.67
SDCBP-203ENST00000424270 ARMC1Q9NVT9 282 aa4.62□□□□□ -1.67
SDCBP-203ENST00000424270 GID8Q9NWU2 228 aa4.62□□□□□ -1.67
SDCBP-203ENST00000424270 ENOPH1Q9UHY7 261 aa4.62□□□□□ -1.67
SDCBP-203ENST00000424270 TMED3Q9Y3Q3 217 aa4.62□□□□□ -1.67
SDCBP-203ENST00000424270 PPP5D1E7EU14 171 aa4.61□□□□□ -1.67
SDCBP-203ENST00000424270 H3BN98 237 aa4.61□□□□□ -1.67
SDCBP-203ENST00000424270 ZNF254O75437 659 aa4.61□□□□□ -1.67
SDCBP-203ENST00000424270 RPP14O95059 124 aaKnown RBP4.61□□□□□ -1.67
SDCBP-203ENST00000424270 NDUFA3O95167 84 aa4.61□□□□□ -1.67
SDCBP-203ENST00000424270 OR2C1O95371 312 aa4.61□□□□□ -1.67
SDCBP-203ENST00000424270 IGLV3-1P01715 115 aa4.61□□□□□ -1.67
SDCBP-203ENST00000424270 HLA-AP01891 365 aaKnown RBP4.61□□□□□ -1.67
SDCBP-203ENST00000424270 SMR3BP02814 79 aaPredicted RBP4.61□□□□□ -1.67
SDCBP-203ENST00000424270 RRM2P31350 389 aa4.61□□□□□ -1.67
SDCBP-203ENST00000424270 MAGEA2P43356 314 aa4.61□□□□□ -1.67
SDCBP-203ENST00000424270 RSBN1Q5VWQ0 802 aaPredicted RBP4.61□□□□□ -1.67
SDCBP-203ENST00000424270 Q6P435 159 aa4.61□□□□□ -1.67
SDCBP-203ENST00000424270 CFAP161Q6P656 301 aa4.61□□□□□ -1.67
SDCBP-203ENST00000424270 DEGS2Q6QHC5 323 aa4.61□□□□□ -1.67
SDCBP-203ENST00000424270 FAM131AQ6UXB0 335 aa4.61□□□□□ -1.67
SDCBP-203ENST00000424270 ZNF562Q6V9R5 426 aa4.61□□□□□ -1.67
SDCBP-203ENST00000424270 ASCL4Q6XD76 172 aa4.61□□□□□ -1.67
SDCBP-203ENST00000424270 PLEKHG7Q6ZR37 379 aa4.61□□□□□ -1.67
SDCBP-203ENST00000424270 Q6ZSN1 163 aa4.61□□□□□ -1.67
SDCBP-203ENST00000424270 C5orf24Q7Z6I8 188 aa4.61□□□□□ -1.67
SDCBP-203ENST00000424270 SERPINA12Q8IW75 414 aa4.61□□□□□ -1.67
SDCBP-203ENST00000424270 ZNF679Q8IYX0 411 aa4.61□□□□□ -1.67
SDCBP-203ENST00000424270 ELMOD2Q8IZ81 293 aa4.61□□□□□ -1.67
SDCBP-203ENST00000424270 LYPD1Q8N2G4 141 aa4.61□□□□□ -1.67
SDCBP-203ENST00000424270 ADAD2Q8NCV1 583 aaKnown RBP4.61□□□□□ -1.67
SDCBP-203ENST00000424270 OR8D4Q8NGM9 314 aa4.61□□□□□ -1.67
SDCBP-203ENST00000424270 PLPPR1Q8TBJ4 325 aa4.61□□□□□ -1.67
SDCBP-203ENST00000424270 TEX47Q8TBZ9 253 aa4.61□□□□□ -1.67
SDCBP-203ENST00000424270 ASB17Q8WXJ9 295 aa4.61□□□□□ -1.67
SDCBP-203ENST00000424270 ATG101Q9BSB4 218 aa4.61□□□□□ -1.67
SDCBP-203ENST00000424270 CHST5Q9GZS9 411 aa4.61□□□□□ -1.67
SDCBP-203ENST00000424270 LINC00574Q9H8X3 128 aa4.61□□□□□ -1.67
SDCBP-203ENST00000424270 MLXQ9UH92 298 aa4.61□□□□□ -1.67
SDCBP-203ENST00000424270 A0A1B0GTI1 187 aa4.6□□□□□ -1.67
SDCBP-203ENST00000424270 AIPO00170 330 aa4.6□□□□□ -1.67
SDCBP-203ENST00000424270 GGCTO75223 188 aaKnown RBP4.6□□□□□ -1.67
SDCBP-203ENST00000424270 KDM4BO94953 1096 aa4.6□□□□□ -1.67
SDCBP-203ENST00000424270 ALOX5APP20292 161 aa4.6□□□□□ -1.67
SDCBP-203ENST00000424270 NPY1RP25929 384 aa4.6□□□□□ -1.67
SDCBP-203ENST00000424270 ADMP35318 185 aa4.6□□□□□ -1.67
SDCBP-203ENST00000424270 VHLP40337 213 aa4.6□□□□□ -1.67
SDCBP-203ENST00000424270 KCNJ3P48549 501 aa4.6□□□□□ -1.67
SDCBP-203ENST00000424270 RHOGP84095 191 aa4.6□□□□□ -1.67
SDCBP-203ENST00000424270 LIPEQ05469 1076 aa4.6□□□□□ -1.67
SDCBP-203ENST00000424270 MED21Q13503 144 aa4.6□□□□□ -1.67
SDCBP-203ENST00000424270 FAM106AQ4KMX7 169 aa4.6□□□□□ -1.67
SDCBP-203ENST00000424270 ZNF585BQ52M93 769 aa4.6□□□□□ -1.67
SDCBP-203ENST00000424270 CT45A1Q5HYN5 189 aa4.6□□□□□ -1.67
SDCBP-203ENST00000424270 MZT2AQ6P582 158 aa4.6□□□□□ -1.67
SDCBP-203ENST00000424270 APRG1Q8IVJ8 170 aa4.6□□□□□ -1.67
SDCBP-203ENST00000424270 STX19Q8N4C7 294 aa4.6□□□□□ -1.67
SDCBP-203ENST00000424270 OR9Q2Q8NGE9 314 aa4.6□□□□□ -1.67
SDCBP-203ENST00000424270 CT45A3Q8NHU0 189 aa4.6□□□□□ -1.67
SDCBP-203ENST00000424270 CNIH3Q8TBE1 160 aa4.6□□□□□ -1.67
SDCBP-203ENST00000424270 PP6455Q8WZ26 134 aa4.6□□□□□ -1.67
SDCBP-203ENST00000424270 C17orf77Q96MU5 243 aa4.6□□□□□ -1.67
SDCBP-203ENST00000424270 OPALINQ96PE5 141 aa4.6□□□□□ -1.67
SDCBP-203ENST00000424270 SPAG8Q99932 426 aaPredicted RBP4.6□□□□□ -1.67
SDCBP-203ENST00000424270 ABHD14AQ9BUJ0 271 aa4.6□□□□□ -1.67
SDCBP-203ENST00000424270 DPCDQ9BVM2 203 aaPredicted RBP4.6□□□□□ -1.67
SDCBP-203ENST00000424270 NCOR1P1Q9H4R4 102 aa4.6□□□□□ -1.67
SDCBP-203ENST00000424270 CMC2Q9NRP2 79 aa4.6□□□□□ -1.67
SDCBP-203ENST00000424270 IL20Q9NYY1 176 aa4.6□□□□□ -1.67
SDCBP-203ENST00000424270 TRAPPC2LQ9UL33 140 aa4.6□□□□□ -1.67
SDCBP-203ENST00000424270 RPL36Q9Y3U8 105 aaKnown RBP4.6□□□□□ -1.67
SDCBP-203ENST00000424270 TMEM14AQ9Y6G1 99 aa4.6□□□□□ -1.67
SDCBP-203ENST00000424270 R4GMQ9 66 aa4.6□□□□□ -1.67
SDCBP-203ENST00000424270 LRP1BQ9NZR2 4599 aa4.59□□□□□ -1.67
SDCBP-203ENST00000424270 TRAV24A0A0B4J272 114 aa4.59□□□□□ -1.67
SDCBP-203ENST00000424270 TRAV25A0A0B4J276 109 aa4.59□□□□□ -1.67
SDCBP-203ENST00000424270 IGHV4-28A0A0C4DH34 117 aa4.59□□□□□ -1.67
SDCBP-203ENST00000424270 IGKV1-12A0A0C4DH73 117 aa4.59□□□□□ -1.67
SDCBP-203ENST00000424270 OR4C46A6NHA9 309 aa4.59□□□□□ -1.67
SDCBP-203ENST00000424270 F8W735 103 aaPredicted RBP4.59□□□□□ -1.67
SDCBP-203ENST00000424270 TGOLN2O43493 480 aa4.59□□□□□ -1.67
SDCBP-203ENST00000424270 NPPAP01160 153 aa4.59□□□□□ -1.67
SDCBP-203ENST00000424270 IGKV1D-12P01611 117 aa4.59□□□□□ -1.67
SDCBP-203ENST00000424270 GSTT2P0CG29 244 aa4.59□□□□□ -1.67
SDCBP-203ENST00000424270 GSTT2BP0CG30 244 aa4.59□□□□□ -1.67
SDCBP-203ENST00000424270 DBTP11182 482 aaKnown RBP4.59□□□□□ -1.67
SDCBP-203ENST00000424270 ATF1P18846 271 aa4.59□□□□□ -1.67
SDCBP-203ENST00000424270 ZNF134P52741 427 aa4.59□□□□□ -1.67
SDCBP-203ENST00000424270 ZNF137PP52743 207 aa4.59□□□□□ -1.67
SDCBP-203ENST00000424270 ADARB1P78563 741 aaKnown RBP4.59□□□□□ -1.67
SDCBP-203ENST00000424270 ZSCAN26Q16670 478 aa4.59□□□□□ -1.67
SDCBP-203ENST00000424270 Q3ZCU0 254 aa4.59□□□□□ -1.67
SDCBP-203ENST00000424270 SLC25A30Q5SVS4 291 aa4.59□□□□□ -1.67
SDCBP-203ENST00000424270 ATAD3CQ5T2N8 411 aa4.59□□□□□ -1.67
SDCBP-203ENST00000424270 LAMTOR1Q6IAA8 161 aa4.59□□□□□ -1.67
SDCBP-203ENST00000424270 OR4A47Q6IF82 309 aa4.59□□□□□ -1.67
SDCBP-203ENST00000424270 RASSF6Q6ZTQ3 369 aa4.59□□□□□ -1.67
SDCBP-203ENST00000424270 IQCF1Q8N6M8 205 aa4.59□□□□□ -1.67
SDCBP-203ENST00000424270 C15orf53Q8NAA6 179 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms