RNA–Protein interactions for RNA: ENST00000424059.1

PMS1-209, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 2,004 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-209ENST00000424059 KRTAP10-5P60370 271 aa2.36□□□□□ -2.03
PMS1-209ENST00000424059 SLC35A1P78382 337 aa2.36□□□□□ -2.03
PMS1-209ENST00000424059 PSG9Q00887 426 aa2.36□□□□□ -2.03
PMS1-209ENST00000424059 TGFBR3Q03167 851 aa2.36□□□□□ -2.03
PMS1-209ENST00000424059 RBM39Q14498 530 aaKnown RBP2.36□□□□□ -2.03
PMS1-209ENST00000424059 ZNF79Q15937 498 aa2.36□□□□□ -2.03
PMS1-209ENST00000424059 TIMM50Q3ZCQ8 353 aa2.36□□□□□ -2.03
PMS1-209ENST00000424059 TMEM52BQ4KMG9 183 aa2.36□□□□□ -2.03
PMS1-209ENST00000424059 ENTPD8Q5MY95 495 aa2.36□□□□□ -2.03
PMS1-209ENST00000424059 OLFML2AQ68BL7 652 aa2.36□□□□□ -2.03
PMS1-209ENST00000424059 Q6ZVH6 145 aa2.36□□□□□ -2.03
PMS1-209ENST00000424059 FAM231DQ6ZW35 169 aa2.36□□□□□ -2.03
PMS1-209ENST00000424059 C16orf82Q7Z2V1 217 aa2.36□□□□□ -2.03
PMS1-209ENST00000424059 CDC20BQ86Y33 519 aa2.36□□□□□ -2.03
PMS1-209ENST00000424059 HIST2H2ABQ8IUE6 130 aaPredicted RBP2.36□□□□□ -2.03
PMS1-209ENST00000424059 PGBD5Q8N414 524 aa2.36□□□□□ -2.03
PMS1-209ENST00000424059 KRTCAP2Q8N6L1 136 aa2.36□□□□□ -2.03
PMS1-209ENST00000424059 WDR31Q8NA23 367 aa2.36□□□□□ -2.03
PMS1-209ENST00000424059 OR2A12Q8NGT7 310 aa2.36□□□□□ -2.03
PMS1-209ENST00000424059 PIFOQ8TCI5 191 aa2.36□□□□□ -2.03
PMS1-209ENST00000424059 ZDHHC19Q8WVZ1 309 aaPredicted RBP2.36□□□□□ -2.03
PMS1-209ENST00000424059 TMEM37Q8WXS4 190 aa2.36□□□□□ -2.03
PMS1-209ENST00000424059 HIST1H2ACQ93077 130 aa2.36□□□□□ -2.03
PMS1-209ENST00000424059 PPCDCQ96CD2 204 aa2.36□□□□□ -2.03
PMS1-209ENST00000424059 PCED1BQ96HM7 432 aa2.36□□□□□ -2.03
PMS1-209ENST00000424059 ZNF419Q96HQ0 510 aaPredicted RBP2.36□□□□□ -2.03
PMS1-209ENST00000424059 DERL3Q96Q80 235 aa2.36□□□□□ -2.03
PMS1-209ENST00000424059 HSD17B10Q99714 261 aaKnown RBP2.36□□□□□ -2.03
PMS1-209ENST00000424059 OR2H1Q9GZK4 316 aa2.36□□□□□ -2.03
PMS1-209ENST00000424059 NPFFR1Q9GZQ6 430 aa2.36□□□□□ -2.03
PMS1-209ENST00000424059 ATG5Q9H1Y0 275 aa2.36□□□□□ -2.03
PMS1-209ENST00000424059 IFI27L2Q9H2X8 130 aa2.36□□□□□ -2.03
PMS1-209ENST00000424059 NPVFQ9HCQ7 196 aa2.36□□□□□ -2.03
PMS1-209ENST00000424059 MARCH5Q9NX47 278 aa2.36□□□□□ -2.03
PMS1-209ENST00000424059 PLEKHB1Q9UF11 243 aaPredicted RBP2.36□□□□□ -2.03
PMS1-209ENST00000424059 CACFD1Q9UGQ2 172 aa2.36□□□□□ -2.03
PMS1-209ENST00000424059 ZNF222Q9UK12 451 aa2.36□□□□□ -2.03
PMS1-209ENST00000424059 PKIGQ9Y2B9 76 aa2.36□□□□□ -2.03
PMS1-209ENST00000424059 CROCCQ5TZA2 2017 aa2.36□□□□□ -2.03
PMS1-209ENST00000424059 A0A087WYN8 130 aa2.35□□□□□ -2.03
PMS1-209ENST00000424059 DUXBA0A1W2PPF3 345 aa2.35□□□□□ -2.03
PMS1-209ENST00000424059 hADV38S2A0JD32 116 aa2.35□□□□□ -2.03
PMS1-209ENST00000424059 IGLC7A0M8Q6 106 aa2.35□□□□□ -2.03
PMS1-209ENST00000424059 ODAMA1E959 279 aa2.35□□□□□ -2.03
PMS1-209ENST00000424059 H7C1C5 153 aa2.35□□□□□ -2.03
PMS1-209ENST00000424059 J3QR89 54 aa2.35□□□□□ -2.03
PMS1-209ENST00000424059 K7ENP7 123 aa2.35□□□□□ -2.03
PMS1-209ENST00000424059 UNC13BO14795 1591 aa2.35□□□□□ -2.03
PMS1-209ENST00000424059 AGPAT2O15120 278 aa2.35□□□□□ -2.03
PMS1-209ENST00000424059 SYNJ1O43426 1573 aa2.35□□□□□ -2.03
PMS1-209ENST00000424059 CLDN11O75508 207 aa2.35□□□□□ -2.03
PMS1-209ENST00000424059 SOX14O95416 240 aa2.35□□□□□ -2.03
PMS1-209ENST00000424059 CGAP01215 116 aa2.35□□□□□ -2.03
PMS1-209ENST00000424059 CSN2P05814 226 aa2.35□□□□□ -2.03
PMS1-209ENST00000424059 MMP7P09237 267 aaPredicted RBP2.35□□□□□ -2.03
PMS1-209ENST00000424059 CT45A8P0DMV1 189 aa2.35□□□□□ -2.03
PMS1-209ENST00000424059 CT45A9P0DMV2 189 aa2.35□□□□□ -2.03
PMS1-209ENST00000424059 SMIM10L2AP0DMW4 78 aa2.35□□□□□ -2.03
PMS1-209ENST00000424059 SMIM10L2BP0DMW5 78 aa2.35□□□□□ -2.03
PMS1-209ENST00000424059 ZNF708P17019 499 aa2.35□□□□□ -2.03
PMS1-209ENST00000424059 NFYAP23511 347 aaPredicted RBP2.35□□□□□ -2.03
PMS1-209ENST00000424059 CNTFRP26992 372 aa2.35□□□□□ -2.03
PMS1-209ENST00000424059 RPL3P39023 403 aaKnown RBP2.35□□□□□ -2.03
PMS1-209ENST00000424059 LHX2P50458 406 aa2.35□□□□□ -2.03
PMS1-209ENST00000424059 DIO3P55073 304 aa2.35□□□□□ -2.03
PMS1-209ENST00000424059 RPS14P62263 151 aaKnown RBP2.35□□□□□ -2.03
PMS1-209ENST00000424059 GRB2P62993 217 aaKnown RBP2.35□□□□□ -2.03
PMS1-209ENST00000424059 AKR1C1Q04828 323 aa2.35□□□□□ -2.03
PMS1-209ENST00000424059 PRDX4Q13162 271 aa2.35□□□□□ -2.03
PMS1-209ENST00000424059 KIAA1644Q3SXP7 199 aa2.35□□□□□ -2.03
PMS1-209ENST00000424059 RAB6CQ53S08 254 aa2.35□□□□□ -2.03
PMS1-209ENST00000424059 CT45A2Q5DJT8 189 aa2.35□□□□□ -2.03
PMS1-209ENST00000424059 AMMECR1LQ6DCA0 310 aa2.35□□□□□ -2.03
PMS1-209ENST00000424059 OR2T2Q6IF00 324 aa2.35□□□□□ -2.03
PMS1-209ENST00000424059 CDC42EP5Q6NZY7 148 aa2.35□□□□□ -2.03
PMS1-209ENST00000424059 TMEM184AQ6ZMB5 413 aa2.35□□□□□ -2.03
PMS1-209ENST00000424059 SLC25A26Q70HW3 274 aa2.35□□□□□ -2.03
PMS1-209ENST00000424059 ANKRD37Q7Z713 158 aa2.35□□□□□ -2.03
PMS1-209ENST00000424059 TTC9CQ8N5M4 171 aa2.35□□□□□ -2.03
PMS1-209ENST00000424059 OR51A2Q8NGJ7 313 aa2.35□□□□□ -2.03
PMS1-209ENST00000424059 SLC37A2Q8TED4 501 aa2.35□□□□□ -2.03
PMS1-209ENST00000424059 ZNRF4Q8WWF5 429 aa2.35□□□□□ -2.03
PMS1-209ENST00000424059 RASL10AQ92737 203 aa2.35□□□□□ -2.03
PMS1-209ENST00000424059 PHYHIPLQ96FC7 376 aa2.35□□□□□ -2.03
PMS1-209ENST00000424059 GMPPAQ96IJ6 420 aaPredicted RBP2.35□□□□□ -2.03
PMS1-209ENST00000424059 ZNF681Q96N22 645 aa2.35□□□□□ -2.03
PMS1-209ENST00000424059 OR4C12Q96R67 309 aa2.35□□□□□ -2.03
PMS1-209ENST00000424059 NIPSNAP3BQ9BS92 247 aa2.35□□□□□ -2.03
PMS1-209ENST00000424059 RPP25Q9BUL9 199 aaKnown RBP2.35□□□□□ -2.03
PMS1-209ENST00000424059 SAMD10Q9BYL1 202 aa2.35□□□□□ -2.03
PMS1-209ENST00000424059 RAB6CQ9H0N0 254 aa2.35□□□□□ -2.03
PMS1-209ENST00000424059 ELL3Q9HB65 397 aaPredicted RBP2.35□□□□□ -2.03
PMS1-209ENST00000424059 FKBP11Q9NYL4 201 aa2.35□□□□□ -2.03
PMS1-209ENST00000424059 NTNG1Q9Y2I2 539 aa2.35□□□□□ -2.03
PMS1-209ENST00000424059 ZNF142P52746 1687 aaPredicted RBP2.35□□□□□ -2.03
PMS1-209ENST00000424059 QRICH2Q9H0J4 1663 aa2.35□□□□□ -2.03
PMS1-209ENST00000424059 IFT172Q9UG01 1749 aa2.35□□□□□ -2.03
PMS1-209ENST00000424059 CDC42BPGQ6DT37 1551 aa2.35□□□□□ -2.03
PMS1-209ENST00000424059 A0A0B4J2A0 478 aa2.35□□□□□ -2.03
PMS1-209ENST00000424059 FAM236DA0A1B0GTK5 79 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms