RNA–Protein interactions for RNA: ENST00000423960.1

FOXN4-203, Transcript of forkhead box N4, humanhuman

TSL 1 (best)

Gene FOXN4, Length 1,219 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-203ENST00000423960 S100A5P33763 92 aa13.77□□□□□ -0.21
FOXN4-203ENST00000423960 CEACAM3P40198 252 aa13.77□□□□□ -0.21
FOXN4-203ENST00000423960 ZNF134P52741 427 aa13.77□□□□□ -0.21
FOXN4-203ENST00000423960 HERPUD1Q15011 391 aa13.77□□□□□ -0.21
FOXN4-203ENST00000423960 SSX2Q16385 188 aa13.77□□□□□ -0.21
FOXN4-203ENST00000423960 KRTAP24-1Q3LI83 254 aa13.77□□□□□ -0.21
FOXN4-203ENST00000423960 CT45A1Q5HYN5 189 aa13.77□□□□□ -0.21
FOXN4-203ENST00000423960 Q6YL49 198 aa13.77□□□□□ -0.21
FOXN4-203ENST00000423960 SLC25A48Q6ZT89 311 aaKnown RBP13.77□□□□□ -0.21
FOXN4-203ENST00000423960 ZNF439Q8NDP4 499 aa13.77□□□□□ -0.21
FOXN4-203ENST00000423960 BEST4Q8NFU0 473 aa13.77□□□□□ -0.21
FOXN4-203ENST00000423960 CT45A3Q8NHU0 189 aa13.77□□□□□ -0.21
FOXN4-203ENST00000423960 GCDHQ92947 438 aaPredicted RBP13.77□□□□□ -0.21
FOXN4-203ENST00000423960 ABHD1Q96SE0 405 aa13.77□□□□□ -0.21
FOXN4-203ENST00000423960 CABLES2Q9BTV7 478 aa13.77□□□□□ -0.21
FOXN4-203ENST00000423960 MEGF9Q9H1U4 602 aa13.77□□□□□ -0.21
FOXN4-203ENST00000423960 IFT46Q9NQC8 304 aa13.77□□□□□ -0.21
FOXN4-203ENST00000423960 OR1A1Q9P1Q5 309 aa13.77□□□□□ -0.21
FOXN4-203ENST00000423960 ANXA10Q9UJ72 324 aa13.77□□□□□ -0.21
FOXN4-203ENST00000423960 HILPDAQ9Y5L2 63 aa13.77□□□□□ -0.21
FOXN4-203ENST00000423960 A0A0A6YYJ9 748 aa13.76□□□□□ -0.21
FOXN4-203ENST00000423960 LY6LH3BQJ8 138 aa13.76□□□□□ -0.21
FOXN4-203ENST00000423960 SULT1C2O00338 296 aa13.76□□□□□ -0.21
FOXN4-203ENST00000423960 SLC31A2O15432 143 aa13.76□□□□□ -0.21
FOXN4-203ENST00000423960 TCF21O43680 179 aa13.76□□□□□ -0.21
FOXN4-203ENST00000423960 LPLP06858 475 aa13.76□□□□□ -0.21
FOXN4-203ENST00000423960 BAMBIQ13145 260 aa13.76□□□□□ -0.21
FOXN4-203ENST00000423960 OR10J5Q8NHC4 309 aa13.76□□□□□ -0.21
FOXN4-203ENST00000423960 GPX8Q8TED1 209 aa13.76□□□□□ -0.21
FOXN4-203ENST00000423960 RABL2AQ9UBK7 228 aaPredicted RBP13.76□□□□□ -0.21
FOXN4-203ENST00000423960 RABL2BQ9UNT1 228 aa13.76□□□□□ -0.21
FOXN4-203ENST00000423960 TRBV6-7A0A0A0MS04 114 aa13.75□□□□□ -0.21
FOXN4-203ENST00000423960 FABP12A6NFH5 140 aa13.75□□□□□ -0.21
FOXN4-203ENST00000423960 FCER2P06734 321 aa13.75□□□□□ -0.21
FOXN4-203ENST00000423960 PAX6P26367 422 aa13.75□□□□□ -0.21
FOXN4-203ENST00000423960 IL3RAP26951 378 aa13.75□□□□□ -0.21
FOXN4-203ENST00000423960 IL18Q14116 193 aa13.75□□□□□ -0.21
FOXN4-203ENST00000423960 TPTE2P1Q5T6R2 138 aa13.75□□□□□ -0.21
FOXN4-203ENST00000423960 PYHIN1Q6K0P9 492 aa13.75□□□□□ -0.21
FOXN4-203ENST00000423960 LDLRAD3Q86YD5 345 aa13.75□□□□□ -0.21
FOXN4-203ENST00000423960 DYNAPQ8N1N2 210 aa13.75□□□□□ -0.21
FOXN4-203ENST00000423960 OR2AK2Q8NG84 335 aa13.75□□□□□ -0.21
FOXN4-203ENST00000423960 JMJD8Q96S16 334 aa13.75□□□□□ -0.21
FOXN4-203ENST00000423960 GINS4Q9BRT9 223 aa13.75□□□□□ -0.21
FOXN4-203ENST00000423960 ABHD14AQ9BUJ0 271 aa13.75□□□□□ -0.21
FOXN4-203ENST00000423960 ANAPC10Q9UM13 185 aa13.75□□□□□ -0.21
FOXN4-203ENST00000423960 STAB1Q9NY15 2570 aa13.75□□□□□ -0.21
FOXN4-203ENST00000423960 ITGB1BP1O14713 200 aa13.74□□□□□ -0.21
FOXN4-203ENST00000423960 NAT1P18440 290 aa13.74□□□□□ -0.21
FOXN4-203ENST00000423960 ARPC4P59998 168 aa13.74□□□□□ -0.21
FOXN4-203ENST00000423960 HILS1P60008 231 aa13.74□□□□□ -0.21
FOXN4-203ENST00000423960 FCAMRQ8WWV6 532 aa13.74□□□□□ -0.21
FOXN4-203ENST00000423960 EDARADDQ8WWZ3 215 aa13.74□□□□□ -0.21
FOXN4-203ENST00000423960 RPEQ96AT9 228 aa13.74□□□□□ -0.21
FOXN4-203ENST00000423960 SOSTQ9BQB4 213 aa13.74□□□□□ -0.21
FOXN4-203ENST00000423960 TOLLIPQ9H0E2 274 aa13.74□□□□□ -0.21
FOXN4-203ENST00000423960 C11orf54Q9H0W9 315 aaPredicted RBP13.74□□□□□ -0.21
FOXN4-203ENST00000423960 RDH8Q9NYR8 311 aa13.74□□□□□ -0.21
FOXN4-203ENST00000423960 OOSP1A8MZH6 123 aa13.73□□□□□ -0.21
FOXN4-203ENST00000423960 HOXA3O43365 443 aaPredicted RBP13.73□□□□□ -0.21
FOXN4-203ENST00000423960 IER3P46695 156 aa13.73□□□□□ -0.21
FOXN4-203ENST00000423960 RAB7AP51149 207 aa13.73□□□□□ -0.21
FOXN4-203ENST00000423960 MRPS10P82664 201 aaKnown RBP13.73□□□□□ -0.21
FOXN4-203ENST00000423960 AANATQ16613 207 aa13.73□□□□□ -0.21
FOXN4-203ENST00000423960 CNPY1Q3B7I2 92 aa13.73□□□□□ -0.21
FOXN4-203ENST00000423960 CCDC144NLQ6NUI1 221 aa13.73□□□□□ -0.21
FOXN4-203ENST00000423960 LYG1Q8N1E2 194 aa13.73□□□□□ -0.21
FOXN4-203ENST00000423960 OR5AP2Q8NGF4 316 aa13.73□□□□□ -0.21
FOXN4-203ENST00000423960 OR6Q1Q8NGQ2 317 aa13.73□□□□□ -0.21
FOXN4-203ENST00000423960 OR52I2Q8NH67 350 aa13.73□□□□□ -0.21
FOXN4-203ENST00000423960 SSMEM1Q8WWF3 244 aa13.73□□□□□ -0.21
FOXN4-203ENST00000423960 SNAPC3Q92966 411 aa13.73□□□□□ -0.21
FOXN4-203ENST00000423960 SSX3Q99909 188 aa13.73□□□□□ -0.21
FOXN4-203ENST00000423960 PARP12Q9H0J9 701 aaKnown RBP13.73□□□□□ -0.21
FOXN4-203ENST00000423960 DPAGT1Q9H3H5 408 aa13.73□□□□□ -0.21
FOXN4-203ENST00000423960 ESM1Q9NQ30 184 aa13.73□□□□□ -0.21
FOXN4-203ENST00000423960 GABARAPH6UMI1 98 aa13.72□□□□□ -0.21
FOXN4-203ENST00000423960 CTDSPLO15194 276 aa13.72□□□□□ -0.21
FOXN4-203ENST00000423960 RBBP9O75884 186 aa13.72□□□□□ -0.21
FOXN4-203ENST00000423960 VENTXO95231 258 aa13.72□□□□□ -0.21
FOXN4-203ENST00000423960 GAPDHP04406 335 aaKnown RBP13.72□□□□□ -0.21
FOXN4-203ENST00000423960 ARHGDIBP52566 201 aa13.72□□□□□ -0.21
FOXN4-203ENST00000423960 SLC9A3R2Q15599 337 aa13.72□□□□□ -0.21
FOXN4-203ENST00000423960 LRRC75BQ2VPJ9 315 aa13.72□□□□□ -0.21
FOXN4-203ENST00000423960 PLA1AQ53H76 456 aa13.72□□□□□ -0.21
FOXN4-203ENST00000423960 RNASE12Q5GAN4 147 aaKnown RBP13.72□□□□□ -0.21
FOXN4-203ENST00000423960 FAM131AQ6UXB0 335 aa13.72□□□□□ -0.21
FOXN4-203ENST00000423960 LYSMD2Q8IV50 215 aa13.72□□□□□ -0.21
FOXN4-203ENST00000423960 H1FOOQ8IZA3 346 aaPredicted RBP13.72□□□□□ -0.21
FOXN4-203ENST00000423960 TMEM86BQ8N661 226 aa13.72□□□□□ -0.21
FOXN4-203ENST00000423960 ZDHHC22Q8N966 263 aa13.72□□□□□ -0.21
FOXN4-203ENST00000423960 TOMM40LQ969M1 308 aa13.72□□□□□ -0.21
FOXN4-203ENST00000423960 ST6GALNAC6Q969X2 333 aa13.72□□□□□ -0.21
FOXN4-203ENST00000423960 C19orf24Q9BVV8 132 aa13.72□□□□□ -0.21
FOXN4-203ENST00000423960 NECAP2Q9NVZ3 263 aa13.72□□□□□ -0.21
FOXN4-203ENST00000423960 VGLL3A8MV65 326 aa13.71□□□□□ -0.21
FOXN4-203ENST00000423960 ST8SIA5O15466 376 aa13.71□□□□□ -0.21
FOXN4-203ENST00000423960 IGHV4-59P01825 116 aa13.71□□□□□ -0.21
FOXN4-203ENST00000423960 RCVRNP35243 200 aa13.71□□□□□ -0.21
FOXN4-203ENST00000423960 OR3A3P47888 321 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms