RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 RRHO14718 337 aa12.73□□□□□ -0.37
CHCHD3-202ENST00000423635 SLC25A17O43808 307 aa12.73□□□□□ -0.37
CHCHD3-202ENST00000423635 RCC1P18754 421 aaPredicted RBP12.73□□□□□ -0.37
CHCHD3-202ENST00000423635 SERPINA2P20848 420 aa12.73□□□□□ -0.37
CHCHD3-202ENST00000423635 CD40LGP29965 261 aa12.73□□□□□ -0.37
CHCHD3-202ENST00000423635 GNGT1P63211 74 aa12.73□□□□□ -0.37
CHCHD3-202ENST00000423635 MRPL28Q13084 256 aaKnown RBP12.73□□□□□ -0.37
CHCHD3-202ENST00000423635 LY6G6FQ5SQ64 297 aa12.73□□□□□ -0.37
CHCHD3-202ENST00000423635 RNLSQ5VYX0 342 aa12.73□□□□□ -0.37
CHCHD3-202ENST00000423635 UNQ5815/PRO19632Q6UWF5 114 aa12.73□□□□□ -0.37
CHCHD3-202ENST00000423635 PPP1R27Q86WC6 154 aa12.73□□□□□ -0.37
CHCHD3-202ENST00000423635 OR9G4Q8NGQ1 327 aa12.73□□□□□ -0.37
CHCHD3-202ENST00000423635 TMEM106AQ96A25 262 aa12.73□□□□□ -0.37
CHCHD3-202ENST00000423635 MRPL48Q96GC5 212 aaKnown RBP12.73□□□□□ -0.37
CHCHD3-202ENST00000423635 FAM110AQ9BQ89 295 aa12.73□□□□□ -0.37
CHCHD3-202ENST00000423635 FBXL15Q9H469 300 aa12.73□□□□□ -0.37
CHCHD3-202ENST00000423635 ISG20L2Q9H9L3 353 aaKnown RBP12.73□□□□□ -0.37
CHCHD3-202ENST00000423635 TAS2R4Q9NYW5 299 aa12.73□□□□□ -0.37
CHCHD3-202ENST00000423635 A3GALT2U3KPV4 340 aa12.73□□□□□ -0.37
CHCHD3-202ENST00000423635 RYR1P21817 5038 aa12.72□□□□□ -0.37
CHCHD3-202ENST00000423635 SHISA3A0PJX4 238 aa12.72□□□□□ -0.37
CHCHD3-202ENST00000423635 E9PI62 339 aa12.72□□□□□ -0.37
CHCHD3-202ENST00000423635 YPEL1O60688 119 aa12.72□□□□□ -0.37
CHCHD3-202ENST00000423635 GTF2F2P13984 249 aa12.72□□□□□ -0.37
CHCHD3-202ENST00000423635 ZNF93P35789 620 aaPredicted RBP12.72□□□□□ -0.37
CHCHD3-202ENST00000423635 GYS2P54840 703 aa12.72□□□□□ -0.37
CHCHD3-202ENST00000423635 MOGAT2Q3SYC2 334 aa12.72□□□□□ -0.37
CHCHD3-202ENST00000423635 LHFPL3Q86UP9 236 aa12.72□□□□□ -0.37
CHCHD3-202ENST00000423635 LFNGQ8NES3 379 aa12.72□□□□□ -0.37
CHCHD3-202ENST00000423635 OR52L2PQ8NGH6 319 aa12.72□□□□□ -0.37
CHCHD3-202ENST00000423635 YPEL2Q96QA6 119 aa12.72□□□□□ -0.37
CHCHD3-202ENST00000423635 S100A13Q99584 98 aa12.72□□□□□ -0.37
CHCHD3-202ENST00000423635 ALG8Q9BVK2 526 aa12.72□□□□□ -0.37
CHCHD3-202ENST00000423635 TAF9BQ9HBM6 251 aa12.72□□□□□ -0.37
CHCHD3-202ENST00000423635 TMEM138Q9NPI0 162 aa12.72□□□□□ -0.37
CHCHD3-202ENST00000423635 MBNL3Q9NUK0 354 aaKnown RBP12.72□□□□□ -0.37
CHCHD3-202ENST00000423635 ETAA1Q9NY74 926 aa12.72□□□□□ -0.37
CHCHD3-202ENST00000423635 JPT1Q9UK76 154 aa12.72□□□□□ -0.37
CHCHD3-202ENST00000423635 DNAH10Q8IVF4 4471 aa12.72□□□□□ -0.37
CHCHD3-202ENST00000423635 A0A1W2PP11 408 aa12.71□□□□□ -0.37
CHCHD3-202ENST00000423635 CA11O75493 328 aa12.71□□□□□ -0.37
CHCHD3-202ENST00000423635 SC5DO75845 299 aa12.71□□□□□ -0.37
CHCHD3-202ENST00000423635 FADS2O95864 444 aaKnown RBP12.71□□□□□ -0.37
CHCHD3-202ENST00000423635 TFAP2AP05549 437 aa12.71□□□□□ -0.37
CHCHD3-202ENST00000423635 MECP2P51608 486 aaKnown RBP12.71□□□□□ -0.37
CHCHD3-202ENST00000423635 HTD2P86397 168 aa12.71□□□□□ -0.37
CHCHD3-202ENST00000423635 MEDAGQ5VYS4 303 aa12.71□□□□□ -0.37
CHCHD3-202ENST00000423635 LCN12Q6JVE5 192 aa12.71□□□□□ -0.37
CHCHD3-202ENST00000423635 ZNF562Q6V9R5 426 aa12.71□□□□□ -0.37
CHCHD3-202ENST00000423635 ZNF554Q86TJ5 538 aa12.71□□□□□ -0.37
CHCHD3-202ENST00000423635 Q8N402 240 aa12.71□□□□□ -0.37
CHCHD3-202ENST00000423635 FAM103A1Q9BTL3 118 aaKnown RBP12.71□□□□□ -0.37
CHCHD3-202ENST00000423635 GAB2Q9UQC2 676 aa12.71□□□□□ -0.37
CHCHD3-202ENST00000423635 LY6G6CO95867 125 aa12.7□□□□□ -0.38
CHCHD3-202ENST00000423635 TRGV3P03979 118 aa12.7□□□□□ -0.38
CHCHD3-202ENST00000423635 OR3A3P47888 321 aa12.7□□□□□ -0.38
CHCHD3-202ENST00000423635 SOX2P48431 317 aa12.7□□□□□ -0.38
CHCHD3-202ENST00000423635 SNRPGP62308 76 aaKnown RBP12.7□□□□□ -0.38
CHCHD3-202ENST00000423635 GPR176Q14439 515 aa12.7□□□□□ -0.38
CHCHD3-202ENST00000423635 GNMTQ14749 295 aa12.7□□□□□ -0.38
CHCHD3-202ENST00000423635 FAM71F2Q6NXP2 309 aa12.7□□□□□ -0.38
CHCHD3-202ENST00000423635 ABHD5Q8WTS1 349 aa12.7□□□□□ -0.38
CHCHD3-202ENST00000423635 RGP1Q92546 391 aaPredicted RBP12.7□□□□□ -0.38
CHCHD3-202ENST00000423635 LGALS12Q96DT0 336 aa12.7□□□□□ -0.38
CHCHD3-202ENST00000423635 MRPS24Q96EL2 167 aaKnown RBP12.7□□□□□ -0.38
CHCHD3-202ENST00000423635 RDH12Q96NR8 316 aa12.7□□□□□ -0.38
CHCHD3-202ENST00000423635 SAA2-SAA4A0A096LPE2 208 aa12.69□□□□□ -0.38
CHCHD3-202ENST00000423635 A0A0G2JLM5 398 aa12.69□□□□□ -0.38
CHCHD3-202ENST00000423635 H3BUA1 57 aa12.69□□□□□ -0.38
CHCHD3-202ENST00000423635 CD2P06729 351 aa12.69□□□□□ -0.38
CHCHD3-202ENST00000423635 CSN3P07498 182 aa12.69□□□□□ -0.38
CHCHD3-202ENST00000423635 SAA2P0DJI9 122 aaPredicted RBP12.69□□□□□ -0.38
CHCHD3-202ENST00000423635 FASP25445 335 aa12.69□□□□□ -0.38
CHCHD3-202ENST00000423635 PPP1CCP36873 323 aaKnown RBP12.69□□□□□ -0.38
CHCHD3-202ENST00000423635 PLGLAQ15195 96 aa12.69□□□□□ -0.38
CHCHD3-202ENST00000423635 SLC22A6Q4U2R8 563 aa12.69□□□□□ -0.38
CHCHD3-202ENST00000423635 DDI2Q5TDH0 399 aa12.69□□□□□ -0.38
CHCHD3-202ENST00000423635 RAB12Q6IQ22 244 aa12.69□□□□□ -0.38
CHCHD3-202ENST00000423635 RNF5Q99942 180 aa12.69□□□□□ -0.38
CHCHD3-202ENST00000423635 IMPAD1Q9NX62 359 aa12.69□□□□□ -0.38
CHCHD3-202ENST00000423635 C13orf42A0A1B0GVH6 325 aa12.68□□□□□ -0.38
CHCHD3-202ENST00000423635 IZUMO1RA6ND01 250 aa12.68□□□□□ -0.38
CHCHD3-202ENST00000423635 SNTNA6NMZ2 147 aa12.68□□□□□ -0.38
CHCHD3-202ENST00000423635 GYG2O15488 501 aa12.68□□□□□ -0.38
CHCHD3-202ENST00000423635 GLAP06280 429 aa12.68□□□□□ -0.38
CHCHD3-202ENST00000423635 BDKRB2P30411 391 aa12.68□□□□□ -0.38
CHCHD3-202ENST00000423635 MC5RP33032 325 aa12.68□□□□□ -0.38
CHCHD3-202ENST00000423635 GBX2P52951 348 aaPredicted RBP12.68□□□□□ -0.38
CHCHD3-202ENST00000423635 SYNJ2BPP57105 145 aa12.68□□□□□ -0.38
CHCHD3-202ENST00000423635 DNAL1Q4LDG9 190 aa12.68□□□□□ -0.38
CHCHD3-202ENST00000423635 FAM131AQ6UXB0 335 aa12.68□□□□□ -0.38
CHCHD3-202ENST00000423635 C5orf24Q7Z6I8 188 aa12.68□□□□□ -0.38
CHCHD3-202ENST00000423635 AMIGO2Q86SJ2 522 aa12.68□□□□□ -0.38
CHCHD3-202ENST00000423635 OR2K2Q8NGT1 345 aa12.68□□□□□ -0.38
CHCHD3-202ENST00000423635 GPR148Q8TDV2 347 aa12.68□□□□□ -0.38
CHCHD3-202ENST00000423635 DDB2Q92466 427 aa12.68□□□□□ -0.38
CHCHD3-202ENST00000423635 KCNIP1Q9NZI2 227 aa12.68□□□□□ -0.38
CHCHD3-202ENST00000423635 PEX16Q9Y5Y5 336 aa12.68□□□□□ -0.38
CHCHD3-202ENST00000423635 ANKRD34BA5PLL1 514 aa12.67□□□□□ -0.38
CHCHD3-202ENST00000423635 OR5H14A6NHG9 310 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms