RNA–Protein interactions for RNA: ENST00000422344.5

TRAF4-204, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-204ENST00000422344 C5orf24Q7Z6I8 188 aa17.4■□□□□ 0.38
TRAF4-204ENST00000422344 OR2AK2Q8NG84 335 aa17.4■□□□□ 0.38
TRAF4-204ENST00000422344 OR4F17Q8NGA8 305 aa17.4■□□□□ 0.38
TRAF4-204ENST00000422344 YPEL2Q96QA6 119 aa17.4■□□□□ 0.38
TRAF4-204ENST00000422344 OR4F4Q96R69 305 aa17.4■□□□□ 0.38
TRAF4-204ENST00000422344 MOSP00540 346 aa17.39■□□□□ 0.37
TRAF4-204ENST00000422344 OPN1MWP04001 364 aa17.39■□□□□ 0.37
TRAF4-204ENST00000422344 OPN1MW2P0DN77 364 aa17.39■□□□□ 0.37
TRAF4-204ENST00000422344 OPN1MW3P0DN78 364 aa17.39■□□□□ 0.37
TRAF4-204ENST00000422344 RAB3BP20337 219 aa17.39■□□□□ 0.37
TRAF4-204ENST00000422344 OR10A3P58181 314 aa17.39■□□□□ 0.37
TRAF4-204ENST00000422344 R3HDM4Q96D70 268 aa17.39■□□□□ 0.37
TRAF4-204ENST00000422344 C12orf4Q9NQ89 552 aa17.39■□□□□ 0.37
TRAF4-204ENST00000422344 RAB22AQ9UL26 194 aa17.39■□□□□ 0.37
TRAF4-204ENST00000422344 MGAT4AQ9UM21 535 aa17.39■□□□□ 0.37
TRAF4-204ENST00000422344 RRP15Q9Y3B9 282 aaKnown RBP17.39■□□□□ 0.37
TRAF4-204ENST00000422344 TMEM272A0A1B0GTI8 110 aa17.38■□□□□ 0.37
TRAF4-204ENST00000422344 A0A1W2PRX2 142 aa17.38■□□□□ 0.37
TRAF4-204ENST00000422344 IFITM5A6NNB3 132 aa17.38■□□□□ 0.37
TRAF4-204ENST00000422344 LANCL1O43813 399 aa17.38■□□□□ 0.37
TRAF4-204ENST00000422344 MRPS15P82914 257 aaKnown RBP17.38■□□□□ 0.37
TRAF4-204ENST00000422344 LY6G6FQ5SQ64 297 aa17.38■□□□□ 0.37
TRAF4-204ENST00000422344 ZNF880Q6PDB4 577 aa17.38■□□□□ 0.37
TRAF4-204ENST00000422344 ARHGAP5-AS1Q96IT6 56 aa17.38■□□□□ 0.37
TRAF4-204ENST00000422344 CMSS1Q9BQ75 279 aaKnown RBP17.38■□□□□ 0.37
TRAF4-204ENST00000422344 HDHD3Q9BSH5 251 aaPredicted RBP17.38■□□□□ 0.37
TRAF4-204ENST00000422344 TRBV6-6A0A0A6YYG2 114 aa17.37■□□□□ 0.37
TRAF4-204ENST00000422344 TCRBV4S1A1TA0A5B7 111 aa17.37■□□□□ 0.37
TRAF4-204ENST00000422344 SERPINE3A8MV23 424 aa17.37■□□□□ 0.37
TRAF4-204ENST00000422344 CD83Q01151 205 aa17.37■□□□□ 0.37
TRAF4-204ENST00000422344 KHDC1LQ5JSQ8 128 aa17.37■□□□□ 0.37
TRAF4-204ENST00000422344 ZNF773Q6PK81 442 aa17.37■□□□□ 0.37
TRAF4-204ENST00000422344 SLC35E3Q7Z769 313 aa17.37■□□□□ 0.37
TRAF4-204ENST00000422344 OR8H1Q8NGG4 311 aa17.37■□□□□ 0.37
TRAF4-204ENST00000422344 PECRQ9BY49 303 aa17.37■□□□□ 0.37
TRAF4-204ENST00000422344 STUB1Q9UNE7 303 aa17.37■□□□□ 0.37
TRAF4-204ENST00000422344 SHISA3A0PJX4 238 aa17.36■□□□□ 0.37
TRAF4-204ENST00000422344 PSMB11A5LHX3 300 aa17.36■□□□□ 0.37
TRAF4-204ENST00000422344 FOXI3A8MTJ6 420 aaPredicted RBP17.36■□□□□ 0.37
TRAF4-204ENST00000422344 ZNF736B4DX44 427 aaPredicted RBP17.36■□□□□ 0.37
TRAF4-204ENST00000422344 G3V4G9 280 aa17.36■□□□□ 0.37
TRAF4-204ENST00000422344 LDLRAD4O15165 306 aa17.36■□□□□ 0.37
TRAF4-204ENST00000422344 TMEM50BP56557 158 aa17.36■□□□□ 0.37
TRAF4-204ENST00000422344 HLA-DRB3P79483 266 aa17.36■□□□□ 0.37
TRAF4-204ENST00000422344 FOXRED2Q8IWF2 684 aa17.36■□□□□ 0.37
TRAF4-204ENST00000422344 Q8N6K4 173 aa17.36■□□□□ 0.37
TRAF4-204ENST00000422344 RASL11BQ9BPW5 248 aa17.36■□□□□ 0.37
TRAF4-204ENST00000422344 LIN7CQ9NUP9 197 aaKnown RBP17.36■□□□□ 0.37
TRAF4-204ENST00000422344 SSR3Q9UNL2 185 aa17.36■□□□□ 0.37
TRAF4-204ENST00000422344 HSPA12AO43301 675 aa17.35■□□□□ 0.37
TRAF4-204ENST00000422344 GADD45AP24522 165 aa17.35■□□□□ 0.37
TRAF4-204ENST00000422344 LSAMPQ13449 338 aa17.35■□□□□ 0.37
TRAF4-204ENST00000422344 Q6ZPA2 131 aa17.35■□□□□ 0.37
TRAF4-204ENST00000422344 CHPT1Q8WUD6 406 aa17.35■□□□□ 0.37
TRAF4-204ENST00000422344 RAB3CQ96E17 227 aa17.35■□□□□ 0.37
TRAF4-204ENST00000422344 SLC23A1Q9UHI7 598 aa17.35■□□□□ 0.37
TRAF4-204ENST00000422344 TSSC4Q9Y5U2 329 aaPredicted RBP17.35■□□□□ 0.37
TRAF4-204ENST00000422344 ADARB2-AS1A8MUL3 147 aa17.34■□□□□ 0.37
TRAF4-204ENST00000422344 PLXNB1O43157 2135 aa17.34■□□□□ 0.37
TRAF4-204ENST00000422344 CD3GP09693 182 aa17.34■□□□□ 0.37
TRAF4-204ENST00000422344 PF4V1P10720 104 aa17.34■□□□□ 0.37
TRAF4-204ENST00000422344 RAB6AP20340 208 aa17.34■□□□□ 0.37
TRAF4-204ENST00000422344 ZBTB25P24278 435 aa17.34■□□□□ 0.37
TRAF4-204ENST00000422344 FGF9P31371 208 aaPredicted RBP17.34■□□□□ 0.37
TRAF4-204ENST00000422344 SLC35B1P78383 322 aa17.34■□□□□ 0.37
TRAF4-204ENST00000422344 BEAN1Q3B7T3 259 aa17.34■□□□□ 0.37
TRAF4-204ENST00000422344 PLAC9Q5JTB6 97 aa17.34■□□□□ 0.37
TRAF4-204ENST00000422344 S1PR3Q99500 378 aa17.34■□□□□ 0.37
TRAF4-204ENST00000422344 MRPL20Q9BYC9 149 aaKnown RBP17.34■□□□□ 0.37
TRAF4-204ENST00000422344 Q9N2K0 584 aa17.34■□□□□ 0.37
TRAF4-204ENST00000422344 TXNL4BQ9NX01 149 aaKnown RBP17.34■□□□□ 0.37
TRAF4-204ENST00000422344 PIPOXQ9P0Z9 390 aa17.34■□□□□ 0.37
TRAF4-204ENST00000422344 SAA2-SAA4A0A096LPE2 208 aa17.33■□□□□ 0.36
TRAF4-204ENST00000422344 METTL21EPA6NDL7 271 aa17.33■□□□□ 0.36
TRAF4-204ENST00000422344 ST8SIA5O15466 376 aa17.33■□□□□ 0.36
TRAF4-204ENST00000422344 IGHG2P01859 326 aa17.33■□□□□ 0.36
TRAF4-204ENST00000422344 PRB2P02812 416 aaPredicted RBP17.33■□□□□ 0.36
TRAF4-204ENST00000422344 SAA2P0DJI9 122 aaPredicted RBP17.33■□□□□ 0.36
TRAF4-204ENST00000422344 OR3A3P47888 321 aa17.33■□□□□ 0.36
TRAF4-204ENST00000422344 PLA2G7Q13093 441 aa17.33■□□□□ 0.36
TRAF4-204ENST00000422344 TCTEX1D4Q5JR98 221 aa17.33■□□□□ 0.36
TRAF4-204ENST00000422344 C10orf99Q6UWK7 81 aa17.33■□□□□ 0.36
TRAF4-204ENST00000422344 ZNF833PQ6ZTB9 187 aa17.33■□□□□ 0.36
TRAF4-204ENST00000422344 ODF3L1Q8IXM7 274 aa17.33■□□□□ 0.36
TRAF4-204ENST00000422344 Q8N9W7 124 aa17.33■□□□□ 0.36
TRAF4-204ENST00000422344 NOL4LQ96MY1 436 aaPredicted RBP17.33■□□□□ 0.36
TRAF4-204ENST00000422344 ABCG5Q9H222 651 aa17.33■□□□□ 0.36
TRAF4-204ENST00000422344 IFI27L2Q9H2X8 130 aa17.33■□□□□ 0.36
TRAF4-204ENST00000422344 SMIM30A4D0T7 59 aa17.32■□□□□ 0.36
TRAF4-204ENST00000422344 RAB29O14966 203 aa17.32■□□□□ 0.36
TRAF4-204ENST00000422344 CEACAM6P40199 344 aa17.32■□□□□ 0.36
TRAF4-204ENST00000422344 GPR12P47775 334 aa17.32■□□□□ 0.36
TRAF4-204ENST00000422344 KCTD21Q4G0X4 260 aa17.32■□□□□ 0.36
TRAF4-204ENST00000422344 ZNF329Q86UD4 541 aa17.32■□□□□ 0.36
TRAF4-204ENST00000422344 OR10R2Q8NGX6 335 aa17.32■□□□□ 0.36
TRAF4-204ENST00000422344 EDARADDQ8WWZ3 215 aa17.32■□□□□ 0.36
TRAF4-204ENST00000422344 NABP2Q9BQ15 211 aa17.32■□□□□ 0.36
TRAF4-204ENST00000422344 LINC00527Q9UJ94 153 aa17.32■□□□□ 0.36
TRAF4-204ENST00000422344 NOTCH3Q9UM47 2321 aa17.31■□□□□ 0.36
TRAF4-204ENST00000422344 A0A075B6Q4 140 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms