RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 TMEM89A2RUT3 159 aa12.69□□□□□ -0.38
BRAT1-202ENST00000421712 CCDC160A6NGH7 325 aa12.69□□□□□ -0.38
BRAT1-202ENST00000421712 HSD17B6O14756 317 aa12.69□□□□□ -0.38
BRAT1-202ENST00000421712 FABP7O15540 132 aa12.69□□□□□ -0.38
BRAT1-202ENST00000421712 ZBTB25P24278 435 aa12.69□□□□□ -0.38
BRAT1-202ENST00000421712 SOX6P35712 828 aa12.69□□□□□ -0.38
BRAT1-202ENST00000421712 RAB7AP51149 207 aa12.69□□□□□ -0.38
BRAT1-202ENST00000421712 DYNLT3P51808 116 aa12.69□□□□□ -0.38
BRAT1-202ENST00000421712 ZNF134P52741 427 aa12.69□□□□□ -0.38
BRAT1-202ENST00000421712 FOXL1Q12952 345 aa12.69□□□□□ -0.38
BRAT1-202ENST00000421712 PNLIPRP3Q17RR3 467 aa12.69□□□□□ -0.38
BRAT1-202ENST00000421712 TMEM219Q86XT9 240 aa12.69□□□□□ -0.38
BRAT1-202ENST00000421712 NUDCD2Q8WVJ2 157 aa12.69□□□□□ -0.38
BRAT1-202ENST00000421712 CAPSLQ8WWF8 208 aa12.69□□□□□ -0.38
BRAT1-202ENST00000421712 ABHD14AQ9BUJ0 271 aa12.69□□□□□ -0.38
BRAT1-202ENST00000421712 ABCG5Q9H222 651 aa12.69□□□□□ -0.38
BRAT1-202ENST00000421712 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.69□□□□□ -0.38
BRAT1-202ENST00000421712 TCF19Q9Y242 345 aa12.69□□□□□ -0.38
BRAT1-202ENST00000421712 SMIM31A0A1B0GVY4 71 aa12.68□□□□□ -0.38
BRAT1-202ENST00000421712 BET1O15155 118 aa12.68□□□□□ -0.38
BRAT1-202ENST00000421712 GSTT2P0CG29 244 aa12.68□□□□□ -0.38
BRAT1-202ENST00000421712 GSTT2BP0CG30 244 aa12.68□□□□□ -0.38
BRAT1-202ENST00000421712 ZNF182P17025 639 aaPredicted RBP12.68□□□□□ -0.38
BRAT1-202ENST00000421712 DTYMKP23919 212 aa12.68□□□□□ -0.38
BRAT1-202ENST00000421712 RPL15P61313 204 aaKnown RBP12.68□□□□□ -0.38
BRAT1-202ENST00000421712 DIAPH2-AS1Q14236 149 aa12.68□□□□□ -0.38
BRAT1-202ENST00000421712 HES1Q14469 280 aa12.68□□□□□ -0.38
BRAT1-202ENST00000421712 SPCS2Q15005 226 aa12.68□□□□□ -0.38
BRAT1-202ENST00000421712 TMEM69Q5SWH9 247 aa12.68□□□□□ -0.38
BRAT1-202ENST00000421712 OR8H3Q8N146 312 aa12.68□□□□□ -0.38
BRAT1-202ENST00000421712 DRAM1Q8N682 238 aa12.68□□□□□ -0.38
BRAT1-202ENST00000421712 ZNF439Q8NDP4 499 aa12.68□□□□□ -0.38
BRAT1-202ENST00000421712 OR4A4PQ8NGN8 299 aa12.68□□□□□ -0.38
BRAT1-202ENST00000421712 C1RLQ9NZP8 487 aa12.68□□□□□ -0.38
BRAT1-202ENST00000421712 OR1A1Q9P1Q5 309 aa12.68□□□□□ -0.38
BRAT1-202ENST00000421712 A6NDX4 124 aa12.67□□□□□ -0.38
BRAT1-202ENST00000421712 FAM25AB3EWG3 89 aa12.67□□□□□ -0.38
BRAT1-202ENST00000421712 FAM25CB3EWG5 89 aa12.67□□□□□ -0.38
BRAT1-202ENST00000421712 FAM25GB3EWG6 89 aa12.67□□□□□ -0.38
BRAT1-202ENST00000421712 TIMM23O14925 209 aa12.67□□□□□ -0.38
BRAT1-202ENST00000421712 ST8SIA5O15466 376 aa12.67□□□□□ -0.38
BRAT1-202ENST00000421712 XRCC3O43542 346 aa12.67□□□□□ -0.38
BRAT1-202ENST00000421712 HPGDSO60760 199 aa12.67□□□□□ -0.38
BRAT1-202ENST00000421712 FAM106CPP0CH98 169 aa12.67□□□□□ -0.38
BRAT1-202ENST00000421712 RAG2P55895 527 aa12.67□□□□□ -0.38
BRAT1-202ENST00000421712 LIAT1Q6ZQX7 453 aa12.67□□□□□ -0.38
BRAT1-202ENST00000421712 TGIF2LXQ8IUE1 241 aa12.67□□□□□ -0.38
BRAT1-202ENST00000421712 OR4F5Q8NH21 305 aa12.67□□□□□ -0.38
BRAT1-202ENST00000421712 OR56B4Q8NH76 319 aa12.67□□□□□ -0.38
BRAT1-202ENST00000421712 OR10J5Q8NHC4 309 aa12.67□□□□□ -0.38
BRAT1-202ENST00000421712 BCL7BQ9BQE9 202 aa12.67□□□□□ -0.38
BRAT1-202ENST00000421712 GINS4Q9BRT9 223 aa12.67□□□□□ -0.38
BRAT1-202ENST00000421712 MRPS7Q9Y2R9 242 aaKnown RBP12.67□□□□□ -0.38
BRAT1-202ENST00000421712 EIF4EP06730 217 aaKnown RBP12.66□□□□□ -0.38
BRAT1-202ENST00000421712 ZNF816Q0VGE8 651 aaPredicted RBP12.66□□□□□ -0.38
BRAT1-202ENST00000421712 SRSF7Q16629 238 aaKnown RBP eCLIP12.66□□□□□ -0.38
BRAT1-202ENST00000421712 AWAT1Q58HT5 328 aa12.66□□□□□ -0.38
BRAT1-202ENST00000421712 IGSF11Q5DX21 431 aa12.66□□□□□ -0.38
BRAT1-202ENST00000421712 LY6G6FQ5SQ64 297 aa12.66□□□□□ -0.38
BRAT1-202ENST00000421712 CCBE1Q6UXH8 406 aaPredicted RBP12.66□□□□□ -0.38
BRAT1-202ENST00000421712 C3orf56Q8N813 242 aa12.66□□□□□ -0.38
BRAT1-202ENST00000421712 SPATA3Q8NHX4 192 aa12.66□□□□□ -0.38
BRAT1-202ENST00000421712 EDARADDQ8WWZ3 215 aa12.66□□□□□ -0.38
BRAT1-202ENST00000421712 AUNIPQ9H7T9 357 aa12.66□□□□□ -0.38
BRAT1-202ENST00000421712 BEX1Q9HBH7 125 aa12.66□□□□□ -0.38
BRAT1-202ENST00000421712 FBN3Q75N90 2809 aa12.66□□□□□ -0.38
BRAT1-202ENST00000421712 IGHV3-72A0A0B4J1Y9 119 aa12.65□□□□□ -0.38
BRAT1-202ENST00000421712 IGHV1-3A0A0C4DH29 117 aa12.65□□□□□ -0.38
BRAT1-202ENST00000421712 IGKV1-6A0A0C4DH72 117 aa12.65□□□□□ -0.38
BRAT1-202ENST00000421712 A0A1W2PPI3 338 aa12.65□□□□□ -0.38
BRAT1-202ENST00000421712 APOA1P02647 267 aa12.65□□□□□ -0.38
BRAT1-202ENST00000421712 FCER2P06734 321 aa12.65□□□□□ -0.38
BRAT1-202ENST00000421712 SNRNP70P08621 437 aaKnown RBP12.65□□□□□ -0.38
BRAT1-202ENST00000421712 PTHLHP12272 177 aa12.65□□□□□ -0.38
BRAT1-202ENST00000421712 MDKP21741 143 aaPredicted RBP12.65□□□□□ -0.38
BRAT1-202ENST00000421712 TAS2R20P59543 309 aa12.65□□□□□ -0.38
BRAT1-202ENST00000421712 RELBQ01201 579 aa12.65□□□□□ -0.38
BRAT1-202ENST00000421712 HNF4GQ14541 408 aa12.65□□□□□ -0.38
BRAT1-202ENST00000421712 RTN4IP1Q8WWV3 396 aaPredicted RBP12.65□□□□□ -0.38
BRAT1-202ENST00000421712 ISOC1Q96CN7 298 aa12.65□□□□□ -0.38
BRAT1-202ENST00000421712 CMTM3Q96MX0 182 aa12.65□□□□□ -0.38
BRAT1-202ENST00000421712 NPFFR1Q9GZQ6 430 aa12.65□□□□□ -0.38
BRAT1-202ENST00000421712 C11orf54Q9H0W9 315 aaPredicted RBP12.65□□□□□ -0.38
BRAT1-202ENST00000421712 RDH8Q9NYR8 311 aa12.65□□□□□ -0.38
BRAT1-202ENST00000421712 PIPOXQ9P0Z9 390 aa12.65□□□□□ -0.38
BRAT1-202ENST00000421712 RNF150Q9ULK6 438 aa12.65□□□□□ -0.38
BRAT1-202ENST00000421712 RBM7Q9Y580 266 aaKnown RBP12.65□□□□□ -0.38
BRAT1-202ENST00000421712 COL6A5A8TX70 2615 aa12.65□□□□□ -0.38
BRAT1-202ENST00000421712 IGKV1D-8A0A087WSZ0 117 aa12.64□□□□□ -0.39
BRAT1-202ENST00000421712 H3BMQ9 156 aa12.64□□□□□ -0.39
BRAT1-202ENST00000421712 RAB29O14966 203 aa12.64□□□□□ -0.39
BRAT1-202ENST00000421712 RGS5O15539 181 aa12.64□□□□□ -0.39
BRAT1-202ENST00000421712 TXNL1O43396 289 aa12.64□□□□□ -0.39
BRAT1-202ENST00000421712 CHST1O43916 411 aa12.64□□□□□ -0.39
BRAT1-202ENST00000421712 SSX5O60225 188 aa12.64□□□□□ -0.39
BRAT1-202ENST00000421712 NDUFA7O95182 113 aa12.64□□□□□ -0.39
BRAT1-202ENST00000421712 ELK1P19419 428 aa12.64□□□□□ -0.39
BRAT1-202ENST00000421712 OR3A3P47888 321 aa12.64□□□□□ -0.39
BRAT1-202ENST00000421712 HERPUD1Q15011 391 aa12.64□□□□□ -0.39
BRAT1-202ENST00000421712 Q6ZS49 121 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms