RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 RPS16P62249 146 aaKnown RBP12.24□□□□□ -0.45
HDAC9-208ENST00000417496 PDZD11Q5EBL8 140 aa12.24□□□□□ -0.45
HDAC9-208ENST00000417496 RNFT1Q5M7Z0 435 aa12.24□□□□□ -0.45
HDAC9-208ENST00000417496 BEND4Q6ZU67 534 aa12.24□□□□□ -0.45
HDAC9-208ENST00000417496 ZNF525Q8N782 197 aa12.24□□□□□ -0.45
HDAC9-208ENST00000417496 RBMXL1Q96E39 390 aaKnown RBP12.24□□□□□ -0.45
HDAC9-208ENST00000417496 IER2Q9BTL4 223 aa12.24□□□□□ -0.45
HDAC9-208ENST00000417496 DOK5Q9P104 306 aa12.24□□□□□ -0.45
HDAC9-208ENST00000417496 USF3Q68DE3 2245 aa12.24□□□□□ -0.45
HDAC9-208ENST00000417496 LOC102723971A0A1B0GUV8 181 aa12.24□□□□□ -0.45
HDAC9-208ENST00000417496 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.24□□□□□ -0.45
HDAC9-208ENST00000417496 J3QT63 122 aa12.24□□□□□ -0.45
HDAC9-208ENST00000417496 HOXB1P14653 301 aaPredicted RBP12.24□□□□□ -0.45
HDAC9-208ENST00000417496 CD200P41217 278 aa12.24□□□□□ -0.45
HDAC9-208ENST00000417496 OR8G1Q15617 311 aa12.24□□□□□ -0.45
HDAC9-208ENST00000417496 GFI1BQ5VTD9 330 aa12.24□□□□□ -0.45
HDAC9-208ENST00000417496 ZNF787Q6DD87 383 aa12.24□□□□□ -0.45
HDAC9-208ENST00000417496 OR8G2PQ6IF36 304 aa12.24□□□□□ -0.45
HDAC9-208ENST00000417496 SPNS3Q6ZMD2 512 aa12.24□□□□□ -0.45
HDAC9-208ENST00000417496 SNIP1Q8TAD8 396 aaKnown RBP12.24□□□□□ -0.45
HDAC9-208ENST00000417496 EDARADDQ8WWZ3 215 aa12.24□□□□□ -0.45
HDAC9-208ENST00000417496 BCL2L2Q92843 193 aaPredicted RBP12.24□□□□□ -0.45
HDAC9-208ENST00000417496 CHD3Q12873 2000 aaKnown RBP12.23□□□□□ -0.45
HDAC9-208ENST00000417496 LNP1A1A4G5 178 aa12.23□□□□□ -0.45
HDAC9-208ENST00000417496 TRGC2P03986 189 aa12.23□□□□□ -0.45
HDAC9-208ENST00000417496 SP1P08047 785 aa12.23□□□□□ -0.45
HDAC9-208ENST00000417496 CD55P08174 381 aa12.23□□□□□ -0.45
HDAC9-208ENST00000417496 IDH3GP51553 393 aaPredicted RBP12.23□□□□□ -0.45
HDAC9-208ENST00000417496 KHDC3LQ587J8 217 aa12.23□□□□□ -0.45
HDAC9-208ENST00000417496 FAM90A2PQ658T7 463 aa12.23□□□□□ -0.45
HDAC9-208ENST00000417496 CDPF1Q6NVV7 123 aa12.23□□□□□ -0.45
HDAC9-208ENST00000417496 ZNF497Q6ZNH5 498 aa12.23□□□□□ -0.45
HDAC9-208ENST00000417496 LINC00596Q86U02 117 aa12.23□□□□□ -0.45
HDAC9-208ENST00000417496 GCNT2Q8N0V5 402 aa12.23□□□□□ -0.45
HDAC9-208ENST00000417496 LILRB2Q8N423 598 aa12.23□□□□□ -0.45
HDAC9-208ENST00000417496 FGFRL1Q8N441 504 aa12.23□□□□□ -0.45
HDAC9-208ENST00000417496 DRAM1Q8N682 238 aa12.23□□□□□ -0.45
HDAC9-208ENST00000417496 WDYHV1Q96HA8 205 aa12.23□□□□□ -0.45
HDAC9-208ENST00000417496 OR4C12Q96R67 309 aa12.23□□□□□ -0.45
HDAC9-208ENST00000417496 GP6Q9HCN6 339 aa12.23□□□□□ -0.45
HDAC9-208ENST00000417496 DOCK11Q5JSL3 2073 aa12.23□□□□□ -0.45
HDAC9-208ENST00000417496 PSPNO60542 156 aa12.22□□□□□ -0.45
HDAC9-208ENST00000417496 NXPH2O95156 264 aa12.22□□□□□ -0.45
HDAC9-208ENST00000417496 KRASP01116 189 aa12.22□□□□□ -0.45
HDAC9-208ENST00000417496 LINC00205P59089 165 aa12.22□□□□□ -0.45
HDAC9-208ENST00000417496 RAB2AP61019 212 aa12.22□□□□□ -0.45
HDAC9-208ENST00000417496 FBXW9Q5XUX1 488 aa12.22□□□□□ -0.45
HDAC9-208ENST00000417496 TMPRSS7Q7RTY8 843 aa12.22□□□□□ -0.45
HDAC9-208ENST00000417496 C1QL4Q86Z23 238 aa12.22□□□□□ -0.45
HDAC9-208ENST00000417496 RCC1LQ96I51 464 aaKnown RBP12.22□□□□□ -0.45
HDAC9-208ENST00000417496 ZPBPQ9BS86 351 aa12.22□□□□□ -0.45
HDAC9-208ENST00000417496 ABI3Q9P2A4 366 aa12.22□□□□□ -0.45
HDAC9-208ENST00000417496 BDP1A6H8Y1 2624 aa12.22□□□□□ -0.45
HDAC9-208ENST00000417496 COL27A1Q8IZC6 1860 aaPredicted RBP12.22□□□□□ -0.45
HDAC9-208ENST00000417496 WNT9BO14905 357 aa12.22□□□□□ -0.45
HDAC9-208ENST00000417496 WISP2O76076 250 aa12.22□□□□□ -0.45
HDAC9-208ENST00000417496 HBE1P02100 147 aa12.22□□□□□ -0.45
HDAC9-208ENST00000417496 MPLP40238 635 aa12.22□□□□□ -0.45
HDAC9-208ENST00000417496 GLIPR1P48060 266 aa12.22□□□□□ -0.45
HDAC9-208ENST00000417496 SLC10A1Q14973 349 aa12.22□□□□□ -0.45
HDAC9-208ENST00000417496 C4orf17Q53FE4 359 aa12.22□□□□□ -0.45
HDAC9-208ENST00000417496 ZNF826PQ6ZT77 177 aa12.22□□□□□ -0.45
HDAC9-208ENST00000417496 ZNF808Q8N4W9 903 aaPredicted RBP12.22□□□□□ -0.45
HDAC9-208ENST00000417496 SSX3Q99909 188 aa12.22□□□□□ -0.45
HDAC9-208ENST00000417496 GGACTQ9BVM4 153 aa12.22□□□□□ -0.45
HDAC9-208ENST00000417496 DDA1Q9BW61 102 aa12.22□□□□□ -0.45
HDAC9-208ENST00000417496 PKIBQ9C010 78 aa12.22□□□□□ -0.45
HDAC9-208ENST00000417496 C19orf67A6NJJ6 358 aa12.21□□□□□ -0.45
HDAC9-208ENST00000417496 HIST1H2BKO60814 126 aa12.21□□□□□ -0.45
HDAC9-208ENST00000417496 LYZL6O75951 148 aa12.21□□□□□ -0.45
HDAC9-208ENST00000417496 HIST1H2BJP06899 126 aa12.21□□□□□ -0.45
HDAC9-208ENST00000417496 MDKP21741 143 aaPredicted RBP12.21□□□□□ -0.45
HDAC9-208ENST00000417496 HIST1H2BOP23527 126 aa12.21□□□□□ -0.45
HDAC9-208ENST00000417496 HIST1H2BBP33778 126 aa12.21□□□□□ -0.45
HDAC9-208ENST00000417496 HIST1H2BDP58876 126 aa12.21□□□□□ -0.45
HDAC9-208ENST00000417496 HIST1H2BCP62807 126 aa12.21□□□□□ -0.45
HDAC9-208ENST00000417496 HIST2H2BEQ16778 126 aa12.21□□□□□ -0.45
HDAC9-208ENST00000417496 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.21□□□□□ -0.45
HDAC9-208ENST00000417496 HIST1H2BHQ93079 126 aa12.21□□□□□ -0.45
HDAC9-208ENST00000417496 GUCD1Q96NT3 240 aa12.21□□□□□ -0.45
HDAC9-208ENST00000417496 HIST1H2BNQ99877 126 aa12.21□□□□□ -0.45
HDAC9-208ENST00000417496 HIST1H2BMQ99879 126 aa12.21□□□□□ -0.45
HDAC9-208ENST00000417496 SPRR3Q9UBC9 169 aa12.21□□□□□ -0.45
HDAC9-208ENST00000417496 A0A087WWC5 75 aa12.21□□□□□ -0.45
HDAC9-208ENST00000417496 UBE2L5PA0A1B0GUS4 154 aa12.21□□□□□ -0.45
HDAC9-208ENST00000417496 BCL2P10415 239 aa12.21□□□□□ -0.45
HDAC9-208ENST00000417496 SLC25A6P12236 298 aa12.21□□□□□ -0.45
HDAC9-208ENST00000417496 HOXA5P20719 270 aa12.21□□□□□ -0.45
HDAC9-208ENST00000417496 SLC35E3Q7Z769 313 aa12.21□□□□□ -0.45
HDAC9-208ENST00000417496 OR1L1Q8NH94 360 aa12.21□□□□□ -0.45
HDAC9-208ENST00000417496 TCEAL7Q9BRU2 100 aa12.21□□□□□ -0.45
HDAC9-208ENST00000417496 RTL8AQ9BWD3 113 aa12.21□□□□□ -0.45
HDAC9-208ENST00000417496 TOLLIPQ9H0E2 274 aa12.21□□□□□ -0.45
HDAC9-208ENST00000417496 OPA3Q9H6K4 179 aa12.21□□□□□ -0.45
HDAC9-208ENST00000417496 CEBPZOSA8MTT3 80 aa12.2□□□□□ -0.46
HDAC9-208ENST00000417496 IGKV1D-33P01593 117 aa12.2□□□□□ -0.46
HDAC9-208ENST00000417496 IGKV1-33P01594 117 aa12.2□□□□□ -0.46
HDAC9-208ENST00000417496 G6PCP35575 357 aa12.2□□□□□ -0.46
HDAC9-208ENST00000417496 ERVK11-1P61568 191 aa12.2□□□□□ -0.46
HDAC9-208ENST00000417496 PPP1CBP62140 327 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms