RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 FOXL1Q12952 345 aa18.61■□□□□ 0.57
SMARCB1-205ENST00000417137 CT45A1Q5HYN5 189 aa18.61■□□□□ 0.57
SMARCB1-205ENST00000417137 FAM53AQ6NSI3 398 aaPredicted RBP18.61■□□□□ 0.57
SMARCB1-205ENST00000417137 OR8H3Q8N146 312 aa18.61■□□□□ 0.57
SMARCB1-205ENST00000417137 CT45A3Q8NHU0 189 aa18.61■□□□□ 0.57
SMARCB1-205ENST00000417137 SLC23A1Q9UHI7 598 aa18.61■□□□□ 0.57
SMARCB1-205ENST00000417137 TMEM235A6NFC5 223 aa18.6■□□□□ 0.57
SMARCB1-205ENST00000417137 FABP7O15540 132 aa18.6■□□□□ 0.57
SMARCB1-205ENST00000417137 XRCC3O43542 346 aa18.6■□□□□ 0.57
SMARCB1-205ENST00000417137 ZNF134P52741 427 aa18.6■□□□□ 0.57
SMARCB1-205ENST00000417137 GNMTQ14749 295 aa18.6■□□□□ 0.57
SMARCB1-205ENST00000417137 DHRS7BQ6IAN0 325 aaPredicted RBP18.6■□□□□ 0.57
SMARCB1-205ENST00000417137 Q6ZS49 121 aa18.6■□□□□ 0.57
SMARCB1-205ENST00000417137 OR2AK2Q8NG84 335 aa18.6■□□□□ 0.57
SMARCB1-205ENST00000417137 ABHD14AQ9BUJ0 271 aa18.6■□□□□ 0.57
SMARCB1-205ENST00000417137 ELF5Q9UKW6 265 aaPredicted RBP18.6■□□□□ 0.57
SMARCB1-205ENST00000417137 TCF19Q9Y242 345 aa18.6■□□□□ 0.57
SMARCB1-205ENST00000417137 SMIM31A0A1B0GVY4 71 aa18.59■□□□□ 0.57
SMARCB1-205ENST00000417137 HSD17B6O14756 317 aa18.59■□□□□ 0.57
SMARCB1-205ENST00000417137 DIRAS3O95661 229 aa18.59■□□□□ 0.57
SMARCB1-205ENST00000417137 CEACAM6P40199 344 aa18.59■□□□□ 0.57
SMARCB1-205ENST00000417137 ZNF816Q0VGE8 651 aaPredicted RBP18.59■□□□□ 0.57
SMARCB1-205ENST00000417137 ST6GALNAC5Q9BVH7 336 aa18.59■□□□□ 0.57
SMARCB1-205ENST00000417137 ZNF230Q9UIE0 474 aaPredicted RBP18.59■□□□□ 0.57
SMARCB1-205ENST00000417137 SLC31A2O15432 143 aa18.58■□□□□ 0.56
SMARCB1-205ENST00000417137 APOA1P02647 267 aa18.58■□□□□ 0.56
SMARCB1-205ENST00000417137 FAM106CPP0CH98 169 aa18.58■□□□□ 0.56
SMARCB1-205ENST00000417137 SPCS2Q15005 226 aa18.58■□□□□ 0.56
SMARCB1-205ENST00000417137 IZUMO1Q8IYV9 350 aa18.58■□□□□ 0.56
SMARCB1-205ENST00000417137 LYG1Q8N1E2 194 aa18.58■□□□□ 0.56
SMARCB1-205ENST00000417137 DTX3Q8N9I9 347 aa18.58■□□□□ 0.56
SMARCB1-205ENST00000417137 EDARADDQ8WWZ3 215 aa18.58■□□□□ 0.56
SMARCB1-205ENST00000417137 GHITMQ9H3K2 345 aa18.58■□□□□ 0.56
SMARCB1-205ENST00000417137 AUNIPQ9H7T9 357 aa18.58■□□□□ 0.56
SMARCB1-205ENST00000417137 C1RLQ9NZP8 487 aa18.58■□□□□ 0.56
SMARCB1-205ENST00000417137 A6NDX4 124 aa18.57■□□□□ 0.56
SMARCB1-205ENST00000417137 ITGB1BP1O14713 200 aa18.57■□□□□ 0.56
SMARCB1-205ENST00000417137 TXNL1O43396 289 aa18.57■□□□□ 0.56
SMARCB1-205ENST00000417137 NDUFA7O95182 113 aa18.57■□□□□ 0.56
SMARCB1-205ENST00000417137 GSTT2P0CG29 244 aa18.57■□□□□ 0.56
SMARCB1-205ENST00000417137 GSTT2BP0CG30 244 aa18.57■□□□□ 0.56
SMARCB1-205ENST00000417137 ZNF137PP52743 207 aa18.57■□□□□ 0.56
SMARCB1-205ENST00000417137 TMEM69Q5SWH9 247 aa18.57■□□□□ 0.56
SMARCB1-205ENST00000417137 THNSL2Q86YJ6 484 aa18.57■□□□□ 0.56
SMARCB1-205ENST00000417137 OR4F5Q8NH21 305 aa18.57■□□□□ 0.56
SMARCB1-205ENST00000417137 OR10J5Q8NHC4 309 aa18.57■□□□□ 0.56
SMARCB1-205ENST00000417137 NUDCD2Q8WVJ2 157 aa18.57■□□□□ 0.56
SMARCB1-205ENST00000417137 MAFIPQ8WZ33 124 aa18.57■□□□□ 0.56
SMARCB1-205ENST00000417137 ST6GALNAC6Q969X2 333 aa18.57■□□□□ 0.56
SMARCB1-205ENST00000417137 A0A1B0GUS0 222 aa18.56■□□□□ 0.56
SMARCB1-205ENST00000417137 TIMM23O14925 209 aa18.56■□□□□ 0.56
SMARCB1-205ENST00000417137 COMPP49747 757 aaPredicted RBP18.56■□□□□ 0.56
SMARCB1-205ENST00000417137 DIAPH2-AS1Q14236 149 aa18.56■□□□□ 0.56
SMARCB1-205ENST00000417137 C12orf54Q6X4T0 127 aa18.56■□□□□ 0.56
SMARCB1-205ENST00000417137 MOB3BQ86TA1 216 aa18.56■□□□□ 0.56
SMARCB1-205ENST00000417137 TGIF2LXQ8IUE1 241 aa18.56■□□□□ 0.56
SMARCB1-205ENST00000417137 CAPSLQ8WWF8 208 aa18.56■□□□□ 0.56
SMARCB1-205ENST00000417137 ISOC1Q96CN7 298 aa18.56■□□□□ 0.56
SMARCB1-205ENST00000417137 OR1A1Q9P1Q5 309 aa18.56■□□□□ 0.56
SMARCB1-205ENST00000417137 IGHV1-3A0A0C4DH29 117 aa18.55■□□□□ 0.56
SMARCB1-205ENST00000417137 A0A1W2PPI3 338 aa18.55■□□□□ 0.56
SMARCB1-205ENST00000417137 BET1O15155 118 aa18.55■□□□□ 0.56
SMARCB1-205ENST00000417137 LANCL1O43813 399 aa18.55■□□□□ 0.56
SMARCB1-205ENST00000417137 CTXN2P0C2S0 81 aa18.55■□□□□ 0.56
SMARCB1-205ENST00000417137 CBX5P45973 191 aa18.55■□□□□ 0.56
SMARCB1-205ENST00000417137 RAG2P55895 527 aa18.55■□□□□ 0.56
SMARCB1-205ENST00000417137 C16orf82Q7Z2V1 217 aa18.55■□□□□ 0.56
SMARCB1-205ENST00000417137 DRAM1Q8N682 238 aa18.55■□□□□ 0.56
SMARCB1-205ENST00000417137 RTN4IP1Q8WWV3 396 aaPredicted RBP18.55■□□□□ 0.56
SMARCB1-205ENST00000417137 AKR1E2Q96JD6 320 aa18.55■□□□□ 0.56
SMARCB1-205ENST00000417137 CABLES2Q9BTV7 478 aa18.55■□□□□ 0.56
SMARCB1-205ENST00000417137 NPFFR1Q9GZQ6 430 aa18.55■□□□□ 0.56
SMARCB1-205ENST00000417137 BEX1Q9HBH7 125 aa18.55■□□□□ 0.56
SMARCB1-205ENST00000417137 PIPOXQ9P0Z9 390 aa18.55■□□□□ 0.56
SMARCB1-205ENST00000417137 IGKV1-6A0A0C4DH72 117 aa18.54■□□□□ 0.56
SMARCB1-205ENST00000417137 CCDC160A6NGH7 325 aa18.54■□□□□ 0.56
SMARCB1-205ENST00000417137 RAB29O14966 203 aa18.54■□□□□ 0.56
SMARCB1-205ENST00000417137 SSX5O60225 188 aa18.54■□□□□ 0.56
SMARCB1-205ENST00000417137 HPGDSO60760 199 aa18.54■□□□□ 0.56
SMARCB1-205ENST00000417137 EIF4EP06730 217 aaKnown RBP18.54■□□□□ 0.56
SMARCB1-205ENST00000417137 REG1BP48304 166 aa18.54■□□□□ 0.56
SMARCB1-205ENST00000417137 IGSF11Q5DX21 431 aa18.54■□□□□ 0.56
SMARCB1-205ENST00000417137 CCBE1Q6UXH8 406 aaPredicted RBP18.54■□□□□ 0.56
SMARCB1-205ENST00000417137 OR56B4Q8NH76 319 aa18.54■□□□□ 0.56
SMARCB1-205ENST00000417137 GINS4Q9BRT9 223 aa18.54■□□□□ 0.56
SMARCB1-205ENST00000417137 TOLLIPQ9H0E2 274 aa18.54■□□□□ 0.56
SMARCB1-205ENST00000417137 RDH8Q9NYR8 311 aa18.54■□□□□ 0.56
SMARCB1-205ENST00000417137 CEPT1Q9Y6K0 416 aa18.54■□□□□ 0.56
SMARCB1-205ENST00000417137 TRBV6-7A0A0A0MS04 114 aa18.53■□□□□ 0.56
SMARCB1-205ENST00000417137 FAM90A9PA6NNJ1 464 aa18.53■□□□□ 0.56
SMARCB1-205ENST00000417137 FAM25AB3EWG3 89 aa18.53■□□□□ 0.56
SMARCB1-205ENST00000417137 FAM25CB3EWG5 89 aa18.53■□□□□ 0.56
SMARCB1-205ENST00000417137 FAM25GB3EWG6 89 aa18.53■□□□□ 0.56
SMARCB1-205ENST00000417137 H3BMQ9 156 aa18.53■□□□□ 0.56
SMARCB1-205ENST00000417137 CD24P25063 80 aa18.53■□□□□ 0.56
SMARCB1-205ENST00000417137 TAS2R20P59543 309 aa18.53■□□□□ 0.56
SMARCB1-205ENST00000417137 HERPUD1Q15011 391 aa18.53■□□□□ 0.56
SMARCB1-205ENST00000417137 AWAT1Q58HT5 328 aa18.53■□□□□ 0.56
SMARCB1-205ENST00000417137 TMEM219Q86XT9 240 aa18.53■□□□□ 0.56
SMARCB1-205ENST00000417137 S1PR3Q99500 378 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms