RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 BPIFB3P59826 476 aa12.59□□□□□ -0.39
NCKIPSD-204ENST00000416649 NMSQ5H8A3 153 aa12.59□□□□□ -0.39
NCKIPSD-204ENST00000416649 ANAPC16Q96DE5 110 aa12.59□□□□□ -0.39
NCKIPSD-204ENST00000416649 BTF3L4Q96K17 158 aa12.59□□□□□ -0.39
NCKIPSD-204ENST00000416649 TMEM56Q96MV1 263 aa12.59□□□□□ -0.39
NCKIPSD-204ENST00000416649 TMEM56-RWDD3S4R434 201 aa12.59□□□□□ -0.39
NCKIPSD-204ENST00000416649 DSPP15924 2871 aaKnown RBP12.59□□□□□ -0.39
NCKIPSD-204ENST00000416649 IGKV1-27A0A075B6S5 117 aa12.59□□□□□ -0.39
NCKIPSD-204ENST00000416649 DUXBA0A1W2PPF3 345 aa12.59□□□□□ -0.39
NCKIPSD-204ENST00000416649 BLACEA4D250 179 aa12.59□□□□□ -0.39
NCKIPSD-204ENST00000416649 DEFA4P12838 97 aa12.59□□□□□ -0.39
NCKIPSD-204ENST00000416649 SNAI3Q3KNW1 292 aa12.59□□□□□ -0.39
NCKIPSD-204ENST00000416649 SPANXN5Q5MJ07 72 aa12.59□□□□□ -0.39
NCKIPSD-204ENST00000416649 Q6ZPA2 131 aa12.59□□□□□ -0.39
NCKIPSD-204ENST00000416649 OR1L3Q8NH93 324 aa12.59□□□□□ -0.39
NCKIPSD-204ENST00000416649 PLEK2Q9NYT0 353 aa12.59□□□□□ -0.39
NCKIPSD-204ENST00000416649 RNF115Q9Y4L5 304 aa12.59□□□□□ -0.39
NCKIPSD-204ENST00000416649 IGKV1D-13A0A0B4J2D9 117 aa12.58□□□□□ -0.39
NCKIPSD-204ENST00000416649 PGPEP1LA6NFU8 196 aa12.58□□□□□ -0.39
NCKIPSD-204ENST00000416649 ZNF814B7Z6K7 855 aa12.58□□□□□ -0.39
NCKIPSD-204ENST00000416649 IGKV1-13P0DP09 117 aa12.58□□□□□ -0.39
NCKIPSD-204ENST00000416649 OSR2Q8N2R0 312 aa12.58□□□□□ -0.39
NCKIPSD-204ENST00000416649 RPP25LQ8N5L8 163 aaKnown RBP12.58□□□□□ -0.39
NCKIPSD-204ENST00000416649 OR10V1Q8NGI7 309 aa12.58□□□□□ -0.39
NCKIPSD-204ENST00000416649 TECTBQ96PL2 329 aa12.58□□□□□ -0.39
NCKIPSD-204ENST00000416649 SPOCK3Q9BQ16 436 aa12.58□□□□□ -0.39
NCKIPSD-204ENST00000416649 ALKBH4Q9NXW9 302 aa12.58□□□□□ -0.39
NCKIPSD-204ENST00000416649 FER1L5A0AVI2 2057 aa12.58□□□□□ -0.4
NCKIPSD-204ENST00000416649 CNOT1A5YKK6 2376 aaKnown RBP12.58□□□□□ -0.4
NCKIPSD-204ENST00000416649 TRBV11-1A0A0K0K1C0 115 aa12.58□□□□□ -0.4
NCKIPSD-204ENST00000416649 ZNF816-ZNF321PA0A0X1KG74 233 aa12.58□□□□□ -0.4
NCKIPSD-204ENST00000416649 PAGE4O60829 102 aa12.58□□□□□ -0.4
NCKIPSD-204ENST00000416649 CRYAAP02489 173 aa12.58□□□□□ -0.4
NCKIPSD-204ENST00000416649 SSPNQ14714 243 aa12.58□□□□□ -0.4
NCKIPSD-204ENST00000416649 GUSBP11Q6P575 273 aa12.58□□□□□ -0.4
NCKIPSD-204ENST00000416649 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.58□□□□□ -0.4
NCKIPSD-204ENST00000416649 WDR5BQ86VZ2 330 aa12.58□□□□□ -0.4
NCKIPSD-204ENST00000416649 BAGE3Q86Y29 109 aa12.58□□□□□ -0.4
NCKIPSD-204ENST00000416649 BAGE2Q86Y30 109 aa12.58□□□□□ -0.4
NCKIPSD-204ENST00000416649 OIT3Q8WWZ8 545 aa12.58□□□□□ -0.4
NCKIPSD-204ENST00000416649 GAL3ST2Q9H3Q3 398 aa12.58□□□□□ -0.4
NCKIPSD-204ENST00000416649 PSENENQ9NZ42 101 aa12.58□□□□□ -0.4
NCKIPSD-204ENST00000416649 RNF24Q9Y225 148 aa12.58□□□□□ -0.4
NCKIPSD-204ENST00000416649 TMEM265A0A087WTH1 108 aa12.58□□□□□ -0.4
NCKIPSD-204ENST00000416649 M0R135 149 aa12.58□□□□□ -0.4
NCKIPSD-204ENST00000416649 IGKV1D-33P01593 117 aa12.58□□□□□ -0.4
NCKIPSD-204ENST00000416649 IGKV1-33P01594 117 aa12.58□□□□□ -0.4
NCKIPSD-204ENST00000416649 TCN2P20062 427 aa12.58□□□□□ -0.4
NCKIPSD-204ENST00000416649 SRP14P37108 136 aaKnown RBP12.58□□□□□ -0.4
NCKIPSD-204ENST00000416649 NPBWR2P48146 333 aa12.58□□□□□ -0.4
NCKIPSD-204ENST00000416649 RANP62826 216 aaKnown RBP12.58□□□□□ -0.4
NCKIPSD-204ENST00000416649 EIF3IQ13347 325 aaKnown RBP12.58□□□□□ -0.4
NCKIPSD-204ENST00000416649 TEX43Q6ZNM6 134 aa12.58□□□□□ -0.4
NCKIPSD-204ENST00000416649 ZNF799Q96GE5 643 aa12.58□□□□□ -0.4
NCKIPSD-204ENST00000416649 WDYHV1Q96HA8 205 aa12.58□□□□□ -0.4
NCKIPSD-204ENST00000416649 IGKV1-12A0A0C4DH73 117 aa12.57□□□□□ -0.4
NCKIPSD-204ENST00000416649 SERF1AO75920 110 aa12.57□□□□□ -0.4
NCKIPSD-204ENST00000416649 IGKV1D-12P01611 117 aa12.57□□□□□ -0.4
NCKIPSD-204ENST00000416649 SCTP09683 121 aa12.57□□□□□ -0.4
NCKIPSD-204ENST00000416649 LYSMD4Q5XG99 296 aa12.57□□□□□ -0.4
NCKIPSD-204ENST00000416649 ZNF525Q8N782 197 aa12.57□□□□□ -0.4
NCKIPSD-204ENST00000416649 SGMS2Q8NHU3 365 aa12.57□□□□□ -0.4
NCKIPSD-204ENST00000416649 GPR146Q96CH1 333 aa12.57□□□□□ -0.4
NCKIPSD-204ENST00000416649 OR4C12Q96R67 309 aa12.57□□□□□ -0.4
NCKIPSD-204ENST00000416649 AGMATQ9BSE5 352 aa12.57□□□□□ -0.4
NCKIPSD-204ENST00000416649 EFNA2O43921 213 aa12.57□□□□□ -0.4
NCKIPSD-204ENST00000416649 SERPINE2P07093 398 aa12.57□□□□□ -0.4
NCKIPSD-204ENST00000416649 CARD18P57730 90 aa12.57□□□□□ -0.4
NCKIPSD-204ENST00000416649 RPS16P62249 146 aaKnown RBP12.57□□□□□ -0.4
NCKIPSD-204ENST00000416649 Q6ZN92 141 aa12.57□□□□□ -0.4
NCKIPSD-204ENST00000416649 OR5AU1Q8NGC0 362 aa12.57□□□□□ -0.4
NCKIPSD-204ENST00000416649 PCED1AQ9H1Q7 454 aa12.57□□□□□ -0.4
NCKIPSD-204ENST00000416649 FGF21Q9NSA1 209 aa12.57□□□□□ -0.4
NCKIPSD-204ENST00000416649 SPTBN2O15020 2390 aa12.57□□□□□ -0.4
NCKIPSD-204ENST00000416649 LILRA5A6NI73 299 aa12.56□□□□□ -0.4
NCKIPSD-204ENST00000416649 UBE2G2P60604 165 aa12.56□□□□□ -0.4
NCKIPSD-204ENST00000416649 RPL15P61313 204 aaKnown RBP12.56□□□□□ -0.4
NCKIPSD-204ENST00000416649 AARDQ4LEZ3 155 aa12.56□□□□□ -0.4
NCKIPSD-204ENST00000416649 SLC25A47Q6Q0C1 308 aa12.56□□□□□ -0.4
NCKIPSD-204ENST00000416649 MRPL52Q86TS9 123 aaKnown RBP12.56□□□□□ -0.4
NCKIPSD-204ENST00000416649 HIPK2Q9H2X6 1198 aa12.56□□□□□ -0.4
NCKIPSD-204ENST00000416649 KLRF1Q9NZS2 232 aa12.56□□□□□ -0.4
NCKIPSD-204ENST00000416649 CACNG5Q9UF02 275 aa12.56□□□□□ -0.4
NCKIPSD-204ENST00000416649 PXMP4Q9Y6I8 212 aa12.56□□□□□ -0.4
NCKIPSD-204ENST00000416649 TRAF3IP2O43734 574 aaPredicted RBP12.56□□□□□ -0.4
NCKIPSD-204ENST00000416649 DUX1O43812 170 aa12.56□□□□□ -0.4
NCKIPSD-204ENST00000416649 NDUFB8O95169 186 aa12.56□□□□□ -0.4
NCKIPSD-204ENST00000416649 TYMSP04818 313 aa12.56□□□□□ -0.4
NCKIPSD-204ENST00000416649 ZNF16P17020 682 aaPredicted RBP12.56□□□□□ -0.4
NCKIPSD-204ENST00000416649 CBLN1P23435 193 aa12.56□□□□□ -0.4
NCKIPSD-204ENST00000416649 ZNF552Q9H707 407 aaPredicted RBP12.56□□□□□ -0.4
NCKIPSD-204ENST00000416649 PDCD6O75340 191 aa12.55□□□□□ -0.4
NCKIPSD-204ENST00000416649 C1QTNF9P0C862 333 aa12.55□□□□□ -0.4
NCKIPSD-204ENST00000416649 TDGF1P13385 188 aa12.55□□□□□ -0.4
NCKIPSD-204ENST00000416649 MPLP40238 635 aa12.55□□□□□ -0.4
NCKIPSD-204ENST00000416649 HINT1P49773 126 aaPredicted RBP12.55□□□□□ -0.4
NCKIPSD-204ENST00000416649 MSMO1Q15800 293 aa12.55□□□□□ -0.4
NCKIPSD-204ENST00000416649 ZNF468Q5VIY5 522 aaPredicted RBP12.55□□□□□ -0.4
NCKIPSD-204ENST00000416649 UNQ5815/PRO19632Q6UWF5 114 aa12.55□□□□□ -0.4
NCKIPSD-204ENST00000416649 ERASQ7Z444 233 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms