RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 ZNF580Q9UK33 172 aa13.81□□□□□ -0.2
PDLIM2-208ENST00000416159 TPRKBQ9Y3C4 175 aa13.81□□□□□ -0.2
PDLIM2-208ENST00000416159 ANKRD65E5RJM6 399 aa13.8□□□□□ -0.2
PDLIM2-208ENST00000416159 CCL24O00175 119 aa13.8□□□□□ -0.2
PDLIM2-208ENST00000416159 SLC22A1O15245 554 aa13.8□□□□□ -0.2
PDLIM2-208ENST00000416159 BPNT1O95861 308 aa13.8□□□□□ -0.2
PDLIM2-208ENST00000416159 RPLP1P05386 114 aaKnown RBP13.8□□□□□ -0.2
PDLIM2-208ENST00000416159 OR5H8P0DN80 308 aa13.8□□□□□ -0.2
PDLIM2-208ENST00000416159 VDAC1P21796 283 aa13.8□□□□□ -0.2
PDLIM2-208ENST00000416159 CDX1P47902 265 aaPredicted RBP13.8□□□□□ -0.2
PDLIM2-208ENST00000416159 KIR2DS1Q14954 304 aa13.8□□□□□ -0.2
PDLIM2-208ENST00000416159 MMDQ15546 238 aa13.8□□□□□ -0.2
PDLIM2-208ENST00000416159 DEFB121Q5J5C9 76 aa13.8□□□□□ -0.2
PDLIM2-208ENST00000416159 C6orf201Q7Z4U5 140 aa13.8□□□□□ -0.2
PDLIM2-208ENST00000416159 ODF3L1Q8IXM7 274 aa13.8□□□□□ -0.2
PDLIM2-208ENST00000416159 UFD1Q92890 307 aa13.8□□□□□ -0.2
PDLIM2-208ENST00000416159 NABP2Q9BQ15 211 aa13.8□□□□□ -0.2
PDLIM2-208ENST00000416159 HSPB9Q9BQS6 159 aa13.8□□□□□ -0.2
PDLIM2-208ENST00000416159 NKX1-2Q9UD57 310 aaPredicted RBP13.8□□□□□ -0.2
PDLIM2-208ENST00000416159 ZMAT5Q9UDW3 170 aaKnown RBP13.8□□□□□ -0.2
PDLIM2-208ENST00000416159 ZNF107Q9UII5 783 aaPredicted RBP13.8□□□□□ -0.2
PDLIM2-208ENST00000416159 WI2-2373I1.2A0A1W2PRP0 233 aa13.79□□□□□ -0.2
PDLIM2-208ENST00000416159 TMEM14DPA8MWL7 114 aa13.79□□□□□ -0.2
PDLIM2-208ENST00000416159 IGHG4P01861 327 aa13.79□□□□□ -0.2
PDLIM2-208ENST00000416159 IGF1P05019 195 aa13.79□□□□□ -0.2
PDLIM2-208ENST00000416159 BLVRBP30043 206 aaPredicted RBP13.79□□□□□ -0.2
PDLIM2-208ENST00000416159 CFHR3Q02985 330 aa13.79□□□□□ -0.2
PDLIM2-208ENST00000416159 UNC119Q13432 240 aa13.79□□□□□ -0.2
PDLIM2-208ENST00000416159 OR2AK2Q8NG84 335 aa13.79□□□□□ -0.2
PDLIM2-208ENST00000416159 OR6M1Q8NGM8 313 aa13.79□□□□□ -0.2
PDLIM2-208ENST00000416159 OR8U1Q8NH10 309 aa13.79□□□□□ -0.2
PDLIM2-208ENST00000416159 RAX2Q96IS3 184 aa13.79□□□□□ -0.2
PDLIM2-208ENST00000416159 ZNF251Q9BRH9 671 aa13.79□□□□□ -0.2
PDLIM2-208ENST00000416159 RIMS4Q9H426 269 aaPredicted RBP13.79□□□□□ -0.2
PDLIM2-208ENST00000416159 PLEKHJ1Q9NW61 149 aa13.79□□□□□ -0.2
PDLIM2-208ENST00000416159 STEAP1Q9UHE8 339 aa13.79□□□□□ -0.2
PDLIM2-208ENST00000416159 NAPSAO96009 420 aa13.78□□□□□ -0.2
PDLIM2-208ENST00000416159 AQP4P55087 323 aa13.78□□□□□ -0.2
PDLIM2-208ENST00000416159 ACTBP60709 375 aa13.78□□□□□ -0.2
PDLIM2-208ENST00000416159 QRFPP83859 136 aa13.78□□□□□ -0.2
PDLIM2-208ENST00000416159 TPBGQ13641 420 aa13.78□□□□□ -0.2
PDLIM2-208ENST00000416159 TRAM1Q15629 374 aa13.78□□□□□ -0.2
PDLIM2-208ENST00000416159 LIPKQ5VXJ0 399 aa13.78□□□□□ -0.2
PDLIM2-208ENST00000416159 ZNF880Q6PDB4 577 aa13.78□□□□□ -0.2
PDLIM2-208ENST00000416159 LCNL1Q6ZST4 164 aa13.78□□□□□ -0.2
PDLIM2-208ENST00000416159 ZNF833PQ6ZTB9 187 aa13.78□□□□□ -0.2
PDLIM2-208ENST00000416159 MOB1BQ7L9L4 216 aa13.78□□□□□ -0.2
PDLIM2-208ENST00000416159 SVOPQ8N4V2 548 aa13.78□□□□□ -0.2
PDLIM2-208ENST00000416159 TMEM203Q969S6 136 aa13.78□□□□□ -0.2
PDLIM2-208ENST00000416159 RBMXL1Q96E39 390 aaKnown RBP13.78□□□□□ -0.2
PDLIM2-208ENST00000416159 KCTD7Q96MP8 289 aa13.78□□□□□ -0.2
PDLIM2-208ENST00000416159 DUX3Q96PT4 197 aa13.78□□□□□ -0.2
PDLIM2-208ENST00000416159 NICN1Q9BSH3 213 aa13.78□□□□□ -0.2
PDLIM2-208ENST00000416159 URM1Q9BTM9 101 aaKnown RBP13.78□□□□□ -0.2
PDLIM2-208ENST00000416159 MRPL20Q9BYC9 149 aaKnown RBP13.78□□□□□ -0.2
PDLIM2-208ENST00000416159 DUSP21Q9H596 190 aa13.78□□□□□ -0.2
PDLIM2-208ENST00000416159 CHMP1AQ9HD42 196 aaPredicted RBP13.78□□□□□ -0.2
PDLIM2-208ENST00000416159 ISYNA1Q9NPH2 558 aa13.78□□□□□ -0.2
PDLIM2-208ENST00000416159 PIPOXQ9P0Z9 390 aa13.78□□□□□ -0.2
PDLIM2-208ENST00000416159 SLC2A2P11168 524 aaPredicted RBP13.77□□□□□ -0.21
PDLIM2-208ENST00000416159 MYF6P23409 242 aa13.77□□□□□ -0.21
PDLIM2-208ENST00000416159 FAM71F2Q6NXP2 309 aa13.77□□□□□ -0.21
PDLIM2-208ENST00000416159 SETD6Q8TBK2 473 aa13.77□□□□□ -0.21
PDLIM2-208ENST00000416159 IL1F10Q8WWZ1 152 aa13.77□□□□□ -0.21
PDLIM2-208ENST00000416159 KCNK15Q9H427 330 aa13.77□□□□□ -0.21
PDLIM2-208ENST00000416159 SAA2-SAA4A0A096LPE2 208 aa13.76□□□□□ -0.21
PDLIM2-208ENST00000416159 TRBV6-6A0A0A6YYG2 114 aa13.76□□□□□ -0.21
PDLIM2-208ENST00000416159 SLC17A2O00624 439 aa13.76□□□□□ -0.21
PDLIM2-208ENST00000416159 NBR2O15453 112 aa13.76□□□□□ -0.21
PDLIM2-208ENST00000416159 RGS10O43665 173 aa13.76□□□□□ -0.21
PDLIM2-208ENST00000416159 HLA-DRB1P01911 266 aa13.76□□□□□ -0.21
PDLIM2-208ENST00000416159 HSMCR30P0CW71 290 aa13.76□□□□□ -0.21
PDLIM2-208ENST00000416159 SAA2P0DJI9 122 aaPredicted RBP13.76□□□□□ -0.21
PDLIM2-208ENST00000416159 ARSBP15848 533 aa13.76□□□□□ -0.21
PDLIM2-208ENST00000416159 PSMA1P25786 263 aaKnown RBP13.76□□□□□ -0.21
PDLIM2-208ENST00000416159 PSMB8P28062 276 aa13.76□□□□□ -0.21
PDLIM2-208ENST00000416159 RANBP1P43487 201 aa13.76□□□□□ -0.21
PDLIM2-208ENST00000416159 OR3A3P47888 321 aa13.76□□□□□ -0.21
PDLIM2-208ENST00000416159 RAB25P57735 213 aa13.76□□□□□ -0.21
PDLIM2-208ENST00000416159 DCTN2Q13561 401 aaKnown RBP13.76□□□□□ -0.21
PDLIM2-208ENST00000416159 TMEM91Q6ZNR0 172 aa13.76□□□□□ -0.21
PDLIM2-208ENST00000416159 NRG4Q8WWG1 115 aa13.76□□□□□ -0.21
PDLIM2-208ENST00000416159 RITA1Q96K30 269 aa13.76□□□□□ -0.21
PDLIM2-208ENST00000416159 LPAR5Q9H1C0 372 aa13.76□□□□□ -0.21
PDLIM2-208ENST00000416159 IFI27L2Q9H2X8 130 aa13.76□□□□□ -0.21
PDLIM2-208ENST00000416159 OR51J1Q9H342 316 aa13.76□□□□□ -0.21
PDLIM2-208ENST00000416159 GHITMQ9H3K2 345 aa13.76□□□□□ -0.21
PDLIM2-208ENST00000416159 PLGRKTQ9HBL7 147 aa13.76□□□□□ -0.21
PDLIM2-208ENST00000416159 KIAA1456Q9P272 454 aa13.76□□□□□ -0.21
PDLIM2-208ENST00000416159 MGAT4AQ9UM21 535 aa13.76□□□□□ -0.21
PDLIM2-208ENST00000416159 A0A0A6YYD4 124 aa13.75□□□□□ -0.21
PDLIM2-208ENST00000416159 ITGB1BP1O14713 200 aa13.75□□□□□ -0.21
PDLIM2-208ENST00000416159 RAB29O14966 203 aa13.75□□□□□ -0.21
PDLIM2-208ENST00000416159 ARL6IP5O75915 188 aa13.75□□□□□ -0.21
PDLIM2-208ENST00000416159 DGCR2P98153 550 aa13.75□□□□□ -0.21
PDLIM2-208ENST00000416159 MLLT11Q13015 90 aaPredicted RBP13.75□□□□□ -0.21
PDLIM2-208ENST00000416159 C5orf64Q2M2E5 130 aa13.75□□□□□ -0.21
PDLIM2-208ENST00000416159 LIN54Q6MZP7 749 aa13.75□□□□□ -0.21
PDLIM2-208ENST00000416159 TMEM65Q6PI78 240 aa13.75□□□□□ -0.21
PDLIM2-208ENST00000416159 FAM89BQ8N5H3 189 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms