RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 PSPNO60542 156 aa12.97□□□□□ -0.33
SHMT2-202ENST00000414700 CLN5O75503 358 aa12.97□□□□□ -0.33
SHMT2-202ENST00000414700 HAND1O96004 215 aa12.97□□□□□ -0.33
SHMT2-202ENST00000414700 MT-ND4LP03901 98 aa12.97□□□□□ -0.33
SHMT2-202ENST00000414700 SFTA3P0C7M3 94 aa12.97□□□□□ -0.33
SHMT2-202ENST00000414700 AMY2BP19961 511 aa12.97□□□□□ -0.33
SHMT2-202ENST00000414700 FUT3P21217 361 aa12.97□□□□□ -0.33
SHMT2-202ENST00000414700 CAV2P51636 162 aa12.97□□□□□ -0.33
SHMT2-202ENST00000414700 KRTAP10-9P60411 292 aa12.97□□□□□ -0.33
SHMT2-202ENST00000414700 IL13RA2Q14627 380 aa12.97□□□□□ -0.33
SHMT2-202ENST00000414700 SPIN3Q5JUX0 258 aa12.97□□□□□ -0.33
SHMT2-202ENST00000414700 LYG2Q86SG7 212 aa12.97□□□□□ -0.33
SHMT2-202ENST00000414700 CD177Q8N6Q3 437 aa12.97□□□□□ -0.33
SHMT2-202ENST00000414700 LPAR3Q9UBY5 353 aa12.97□□□□□ -0.33
SHMT2-202ENST00000414700 FAM96BQ9Y3D0 163 aa12.97□□□□□ -0.33
SHMT2-202ENST00000414700 ITPR2Q14571 2701 aa12.97□□□□□ -0.33
SHMT2-202ENST00000414700 FAM90A10PA6NDY2 464 aa12.96□□□□□ -0.33
SHMT2-202ENST00000414700 FAM90A18PA6NE21 464 aa12.96□□□□□ -0.33
SHMT2-202ENST00000414700 FAM90A16PA6NEW6 464 aa12.96□□□□□ -0.33
SHMT2-202ENST00000414700 FAM90A20PA6NIJ5 464 aa12.96□□□□□ -0.33
SHMT2-202ENST00000414700 FAM90A8PA6NJQ4 464 aa12.96□□□□□ -0.33
SHMT2-202ENST00000414700 FAM90A7PA6NKC0 464 aa12.96□□□□□ -0.33
SHMT2-202ENST00000414700 FAM90A22PA8MWA6 464 aa12.96□□□□□ -0.33
SHMT2-202ENST00000414700 FAM90A12PA8MX19 464 aa12.96□□□□□ -0.33
SHMT2-202ENST00000414700 FAM90A5PA8MXJ8 464 aa12.96□□□□□ -0.33
SHMT2-202ENST00000414700 FAM90A23PA8MXZ1 464 aa12.96□□□□□ -0.33
SHMT2-202ENST00000414700 M0QYG6 137 aa12.96□□□□□ -0.33
SHMT2-202ENST00000414700 OVOL3O00110 214 aa12.96□□□□□ -0.33
SHMT2-202ENST00000414700 DEGS1O15121 323 aa12.96□□□□□ -0.33
SHMT2-202ENST00000414700 ST8SIA5O15466 376 aa12.96□□□□□ -0.33
SHMT2-202ENST00000414700 IGHV2-5P01817 119 aa12.96□□□□□ -0.33
SHMT2-202ENST00000414700 FAM90A15PP0C7V4 464 aa12.96□□□□□ -0.33
SHMT2-202ENST00000414700 FAM90A13PP0C7W8 464 aa12.96□□□□□ -0.33
SHMT2-202ENST00000414700 FAM90A14PP0C7W9 464 aa12.96□□□□□ -0.33
SHMT2-202ENST00000414700 FAM90A24PP0C7X0 464 aa12.96□□□□□ -0.33
SHMT2-202ENST00000414700 ZNF735P0CB33 412 aa12.96□□□□□ -0.33
SHMT2-202ENST00000414700 FAM157CP0CG43 387 aa12.96□□□□□ -0.33
SHMT2-202ENST00000414700 IRF2P14316 349 aa12.96□□□□□ -0.33
SHMT2-202ENST00000414700 ZBTB25P24278 435 aa12.96□□□□□ -0.33
SHMT2-202ENST00000414700 F2RL1P55085 397 aa12.96□□□□□ -0.33
SHMT2-202ENST00000414700 OR2B11Q5JQS5 317 aa12.96□□□□□ -0.33
SHMT2-202ENST00000414700 DUX4L9Q6RFH8 374 aaPredicted RBP12.96□□□□□ -0.33
SHMT2-202ENST00000414700 GVQW1Q8N7I0 195 aa12.96□□□□□ -0.33
SHMT2-202ENST00000414700 SUMF2Q8NBJ7 301 aa12.96□□□□□ -0.33
SHMT2-202ENST00000414700 TMED6Q8WW62 240 aa12.96□□□□□ -0.33
SHMT2-202ENST00000414700 SAT2Q96F10 170 aaPredicted RBP12.96□□□□□ -0.33
SHMT2-202ENST00000414700 CLCC1Q96S66 551 aa12.96□□□□□ -0.33
SHMT2-202ENST00000414700 ZNF107Q9UII5 783 aaPredicted RBP12.96□□□□□ -0.33
SHMT2-202ENST00000414700 AK3Q9UIJ7 227 aa12.96□□□□□ -0.33
SHMT2-202ENST00000414700 HSF4Q9ULV5 492 aa12.96□□□□□ -0.33
SHMT2-202ENST00000414700 WIPI2Q9Y4P8 454 aa12.96□□□□□ -0.33
SHMT2-202ENST00000414700 A0A1W2PPE3 182 aa12.96□□□□□ -0.34
SHMT2-202ENST00000414700 LRRC30A6NM36 301 aa12.96□□□□□ -0.34
SHMT2-202ENST00000414700 SLC33A1O00400 549 aaPredicted RBP12.96□□□□□ -0.34
SHMT2-202ENST00000414700 KNG1P01042 644 aa12.96□□□□□ -0.34
SHMT2-202ENST00000414700 GSTP1P09211 210 aaKnown RBP12.96□□□□□ -0.34
SHMT2-202ENST00000414700 PGAM2P15259 253 aa12.96□□□□□ -0.34
SHMT2-202ENST00000414700 RBM39Q14498 530 aaKnown RBP12.96□□□□□ -0.34
SHMT2-202ENST00000414700 C20orf204Q6ZNR8 217 aa12.96□□□□□ -0.34
SHMT2-202ENST00000414700 Q6ZPA2 131 aa12.96□□□□□ -0.34
SHMT2-202ENST00000414700 LINC00596Q86U02 117 aa12.96□□□□□ -0.34
SHMT2-202ENST00000414700 TMPRSS5Q9H3S3 457 aa12.96□□□□□ -0.34
SHMT2-202ENST00000414700 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.96□□□□□ -0.34
SHMT2-202ENST00000414700 CYTL1Q9NRR1 136 aa12.96□□□□□ -0.34
SHMT2-202ENST00000414700 UNC79Q9P2D8 2635 aa12.95□□□□□ -0.34
SHMT2-202ENST00000414700 RNASEK-C17orf49H0YIS7 233 aa12.95□□□□□ -0.34
SHMT2-202ENST00000414700 SH2D1BO14796 132 aa12.95□□□□□ -0.34
SHMT2-202ENST00000414700 OR8U8P0C7N1 319 aa12.95□□□□□ -0.34
SHMT2-202ENST00000414700 SELLP14151 372 aa12.95□□□□□ -0.34
SHMT2-202ENST00000414700 GABRA2P47869 451 aa12.95□□□□□ -0.34
SHMT2-202ENST00000414700 COL10A1Q03692 680 aa12.95□□□□□ -0.34
SHMT2-202ENST00000414700 ARFRP1Q13795 201 aa12.95□□□□□ -0.34
SHMT2-202ENST00000414700 FIP1L1Q6UN15 594 aaKnown RBP12.95□□□□□ -0.34
SHMT2-202ENST00000414700 SLC25A42Q86VD7 318 aa12.95□□□□□ -0.34
SHMT2-202ENST00000414700 MITD1Q8WV92 249 aa12.95□□□□□ -0.34
SHMT2-202ENST00000414700 CCL19Q99731 98 aa12.95□□□□□ -0.34
SHMT2-202ENST00000414700 TRBV6-7A0A0A0MS04 114 aa12.95□□□□□ -0.34
SHMT2-202ENST00000414700 OOEPA6NGQ2 149 aa12.95□□□□□ -0.34
SHMT2-202ENST00000414700 GYPAP02724 150 aa12.95□□□□□ -0.34
SHMT2-202ENST00000414700 DAOP14920 347 aa12.95□□□□□ -0.34
SHMT2-202ENST00000414700 PRDX2P32119 198 aa12.95□□□□□ -0.34
SHMT2-202ENST00000414700 STUMQ69YW2 141 aa12.95□□□□□ -0.34
SHMT2-202ENST00000414700 TRAPPC6BQ86SZ2 158 aa12.95□□□□□ -0.34
SHMT2-202ENST00000414700 ZNRF1Q8ND25 227 aa12.95□□□□□ -0.34
SHMT2-202ENST00000414700 OR13C8Q8NGS7 320 aa12.95□□□□□ -0.34
SHMT2-202ENST00000414700 MAFIPQ8WZ33 124 aa12.95□□□□□ -0.34
SHMT2-202ENST00000414700 DCUN1D4Q92564 292 aa12.95□□□□□ -0.34
SHMT2-202ENST00000414700 PHB2Q99623 299 aa12.95□□□□□ -0.34
SHMT2-202ENST00000414700 DOCK11Q5JSL3 2073 aa12.95□□□□□ -0.34
SHMT2-202ENST00000414700 SVEP1Q4LDE5 3571 aa12.94□□□□□ -0.34
SHMT2-202ENST00000414700 MED13LQ71F56 2210 aa12.94□□□□□ -0.34
SHMT2-202ENST00000414700 A0A0B4J2A0 478 aa12.94□□□□□ -0.34
SHMT2-202ENST00000414700 SERPINE3A8MV23 424 aa12.94□□□□□ -0.34
SHMT2-202ENST00000414700 ZNF736B4DX44 427 aaPredicted RBP12.94□□□□□ -0.34
SHMT2-202ENST00000414700 PSMB6P28072 239 aa12.94□□□□□ -0.34
SHMT2-202ENST00000414700 TEX36Q5VZQ5 186 aa12.94□□□□□ -0.34
SHMT2-202ENST00000414700 ZNF787Q6DD87 383 aa12.94□□□□□ -0.34
SHMT2-202ENST00000414700 C1orf87Q8N0U7 546 aa12.94□□□□□ -0.34
SHMT2-202ENST00000414700 NEK7Q8TDX7 302 aa12.94□□□□□ -0.34
SHMT2-202ENST00000414700 NEU4Q8WWR8 484 aaPredicted RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms