RNA–Protein interactions for RNA: ENST00000414664.5

CPNE1-207, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,070 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-207ENST00000414664 OR56B4Q8NH76 319 aa20.27■□□□□ 0.84
CPNE1-207ENST00000414664 CFHR4Q92496 578 aa20.27■□□□□ 0.84
CPNE1-207ENST00000414664 ST6GALNAC6Q969X2 333 aa20.27■□□□□ 0.84
CPNE1-207ENST00000414664 RBM14Q96PK6 669 aaKnown RBP20.27■□□□□ 0.84
CPNE1-207ENST00000414664 SLC25A33Q9BSK2 321 aa20.27■□□□□ 0.84
CPNE1-207ENST00000414664 FUNDC2Q9BWH2 189 aa20.27■□□□□ 0.84
CPNE1-207ENST00000414664 ANK2Q01484 3957 aa20.26■□□□□ 0.83
CPNE1-207ENST00000414664 IGHV1-3A0A0C4DH29 117 aa20.26■□□□□ 0.83
CPNE1-207ENST00000414664 SNRNP70P08621 437 aaKnown RBP20.26■□□□□ 0.83
CPNE1-207ENST00000414664 SMIM18P0DKX4 95 aa20.26■□□□□ 0.83
CPNE1-207ENST00000414664 TALDO1P37837 337 aa20.26■□□□□ 0.83
CPNE1-207ENST00000414664 REG1BP48304 166 aa20.26■□□□□ 0.83
CPNE1-207ENST00000414664 TGIF2LXQ8IUE1 241 aa20.26■□□□□ 0.83
CPNE1-207ENST00000414664 LYG1Q8N1E2 194 aa20.26■□□□□ 0.83
CPNE1-207ENST00000414664 RTN4IP1Q8WWV3 396 aaPredicted RBP20.26■□□□□ 0.83
CPNE1-207ENST00000414664 PHF21AQ96BD5 680 aa20.26■□□□□ 0.83
CPNE1-207ENST00000414664 MRPS26Q9BYN8 205 aaKnown RBP20.26■□□□□ 0.83
CPNE1-207ENST00000414664 RHBDL2Q9NX52 303 aa20.26■□□□□ 0.83
CPNE1-207ENST00000414664 TRDCB7Z8K6 153 aa20.25■□□□□ 0.83
CPNE1-207ENST00000414664 M0QZK8 103 aa20.25■□□□□ 0.83
CPNE1-207ENST00000414664 ZBTB25P24278 435 aa20.25■□□□□ 0.83
CPNE1-207ENST00000414664 HES1Q14469 280 aa20.25■□□□□ 0.83
CPNE1-207ENST00000414664 KIR2DS1Q14954 304 aa20.25■□□□□ 0.83
CPNE1-207ENST00000414664 Q8N2B8 174 aa20.25■□□□□ 0.83
CPNE1-207ENST00000414664 SGMS2Q8NHU3 365 aa20.25■□□□□ 0.83
CPNE1-207ENST00000414664 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP20.25■□□□□ 0.831e-7■■■■□ 24.8
CPNE1-207ENST00000414664 HSPA12AO43301 675 aa20.24■□□□□ 0.83
CPNE1-207ENST00000414664 FCGR3AP08637 254 aa20.24■□□□□ 0.83
CPNE1-207ENST00000414664 SCTP09683 121 aa20.24■□□□□ 0.83
CPNE1-207ENST00000414664 TGFBR1P36897 503 aa20.24■□□□□ 0.83
CPNE1-207ENST00000414664 RPS19P39019 145 aaKnown RBP20.24■□□□□ 0.83
CPNE1-207ENST00000414664 HABP2Q14520 560 aaPredicted RBP20.24■□□□□ 0.83
CPNE1-207ENST00000414664 CDNFQ49AH0 187 aa20.24■□□□□ 0.83
CPNE1-207ENST00000414664 ARSJQ5FYB0 599 aaPredicted RBP20.24■□□□□ 0.83
CPNE1-207ENST00000414664 ZNF702PQ9H963 129 aa20.24■□□□□ 0.83
CPNE1-207ENST00000414664 SLC23A1Q9UHI7 598 aa20.24■□□□□ 0.83
CPNE1-207ENST00000414664 SIGLEC9Q9Y336 463 aa20.24■□□□□ 0.83
CPNE1-207ENST00000414664 LANCL1O43813 399 aa20.23■□□□□ 0.83
CPNE1-207ENST00000414664 TMEM11P17152 192 aa20.23■□□□□ 0.83
CPNE1-207ENST00000414664 OR4A4PQ8NGN8 299 aa20.23■□□□□ 0.83
CPNE1-207ENST00000414664 EDARADDQ8WWZ3 215 aa20.23■□□□□ 0.83
CPNE1-207ENST00000414664 GHITMQ9H3K2 345 aa20.23■□□□□ 0.83
CPNE1-207ENST00000414664 SPATA2Q9UM82 520 aa20.23■□□□□ 0.83
CPNE1-207ENST00000414664 ITGB1BP1O14713 200 aa20.22■□□□□ 0.83
CPNE1-207ENST00000414664 IGKV1D-33P01593 117 aa20.22■□□□□ 0.83
CPNE1-207ENST00000414664 IGKV1-33P01594 117 aa20.22■□□□□ 0.83
CPNE1-207ENST00000414664 GSTP1P09211 210 aaKnown RBP20.22■□□□□ 0.83
CPNE1-207ENST00000414664 CD1BP29016 333 aa20.22■□□□□ 0.83
CPNE1-207ENST00000414664 CEACAM6P40199 344 aa20.22■□□□□ 0.83
CPNE1-207ENST00000414664 SERPINB10P48595 397 aa20.22■□□□□ 0.83
CPNE1-207ENST00000414664 BLCAPP62952 87 aa20.22■□□□□ 0.83
CPNE1-207ENST00000414664 PITPNAQ00169 270 aa20.22■□□□□ 0.83
CPNE1-207ENST00000414664 SRSF7Q16629 238 aaKnown RBP eCLIP20.22■□□□□ 0.831e-7■□□□□ 9.8
CPNE1-207ENST00000414664 OR5H6Q8NGV6 325 aa20.22■□□□□ 0.83
CPNE1-207ENST00000414664 CITED1Q99966 193 aa20.22■□□□□ 0.83
CPNE1-207ENST00000414664 PIPOXQ9P0Z9 390 aa20.22■□□□□ 0.83
CPNE1-207ENST00000414664 MOB4Q9Y3A3 225 aa20.22■□□□□ 0.83
CPNE1-207ENST00000414664 FABP7O15540 132 aa20.21■□□□□ 0.83
CPNE1-207ENST00000414664 EBI3Q14213 229 aa20.21■□□□□ 0.83
CPNE1-207ENST00000414664 HACD4Q5VWC8 232 aa20.21■□□□□ 0.83
CPNE1-207ENST00000414664 IZUMO1Q8IYV9 350 aa20.21■□□□□ 0.83
CPNE1-207ENST00000414664 OR2T10Q8NGZ9 312 aa20.21■□□□□ 0.83
CPNE1-207ENST00000414664 A0A0A6YYH2 397 aa20.2■□□□□ 0.82
CPNE1-207ENST00000414664 A6NJ64 397 aa20.2■□□□□ 0.82
CPNE1-207ENST00000414664 DTYMKP23919 212 aa20.2■□□□□ 0.82
CPNE1-207ENST00000414664 PNLIPRP3Q17RR3 467 aa20.2■□□□□ 0.82
CPNE1-207ENST00000414664 ANKRD13BQ86YJ7 626 aa20.2■□□□□ 0.82
CPNE1-207ENST00000414664 DIABLOQ9NR28 239 aa20.2■□□□□ 0.82
CPNE1-207ENST00000414664 IGHV3-72A0A0B4J1Y9 119 aa20.19■□□□□ 0.82
CPNE1-207ENST00000414664 RAB29O14966 203 aa20.19■□□□□ 0.82
CPNE1-207ENST00000414664 PEX14O75381 377 aa20.19■□□□□ 0.82
CPNE1-207ENST00000414664 DIRAS3O95661 229 aa20.19■□□□□ 0.82
CPNE1-207ENST00000414664 VBP1P61758 197 aa20.19■□□□□ 0.82
CPNE1-207ENST00000414664 NCS1P62166 190 aa20.19■□□□□ 0.82
CPNE1-207ENST00000414664 SRSF4Q08170 494 aaKnown RBP20.19■□□□□ 0.82
CPNE1-207ENST00000414664 HNF4GQ14541 408 aa20.19■□□□□ 0.82
CPNE1-207ENST00000414664 FAM71F2Q6NXP2 309 aa20.19■□□□□ 0.82
CPNE1-207ENST00000414664 ODF3L1Q8IXM7 274 aa20.19■□□□□ 0.82
CPNE1-207ENST00000414664 SLC25A46Q96AG3 418 aa20.19■□□□□ 0.82
CPNE1-207ENST00000414664 SLC25A38Q96DW6 304 aa20.19■□□□□ 0.82
CPNE1-207ENST00000414664 S1PR3Q99500 378 aa20.19■□□□□ 0.82
CPNE1-207ENST00000414664 OR1A1Q9P1Q5 309 aa20.19■□□□□ 0.82
CPNE1-207ENST00000414664 ST8SIA5O15466 376 aa20.18■□□□□ 0.82
CPNE1-207ENST00000414664 GNG2P59768 71 aa20.18■□□□□ 0.82
CPNE1-207ENST00000414664 KRTAP10-3P60369 221 aa20.18■□□□□ 0.82
CPNE1-207ENST00000414664 ZNF260Q3ZCT1 412 aa20.18■□□□□ 0.82
CPNE1-207ENST00000414664 ABCA11PQ4W5N1 156 aa20.18■□□□□ 0.82
CPNE1-207ENST00000414664 FBLN7Q53RD9 439 aa20.18■□□□□ 0.82
CPNE1-207ENST00000414664 Q6ZS49 121 aa20.18■□□□□ 0.82
CPNE1-207ENST00000414664 ZNF833PQ6ZTB9 187 aa20.18■□□□□ 0.82
CPNE1-207ENST00000414664 GPR141Q7Z602 305 aa20.18■□□□□ 0.82
CPNE1-207ENST00000414664 KLHDC1Q8N7A1 406 aa20.18■□□□□ 0.82
CPNE1-207ENST00000414664 KCTD12Q96CX2 325 aaKnown RBP20.18■□□□□ 0.82
CPNE1-207ENST00000414664 EAF1Q96JC9 268 aaPredicted RBP20.18■□□□□ 0.82
CPNE1-207ENST00000414664 DCSTAMPQ9H295 470 aa20.18■□□□□ 0.82
CPNE1-207ENST00000414664 IFI27L2Q9H2X8 130 aa20.18■□□□□ 0.82
CPNE1-207ENST00000414664 SERTAD4Q9NUC0 356 aa20.18■□□□□ 0.82
CPNE1-207ENST00000414664 ZNF230Q9UIE0 474 aaPredicted RBP20.18■□□□□ 0.82
CPNE1-207ENST00000414664 SAA2-SAA4A0A096LPE2 208 aa20.17■□□□□ 0.82
CPNE1-207ENST00000414664 IGKV1-6A0A0C4DH72 117 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms