RNA–Protein interactions for RNA: ENST00000413601.3

LIMS4-201, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LIMS4, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-201ENST00000413601 TRBV6-6A0A0A6YYG2 114 aa11.77□□□□□ -0.53
LIMS4-201ENST00000413601 ZNF736B4DX44 427 aaPredicted RBP11.77□□□□□ -0.53
LIMS4-201ENST00000413601 YPEL1O60688 119 aa11.77□□□□□ -0.53
LIMS4-201ENST00000413601 RGS11O94810 467 aa11.77□□□□□ -0.53
LIMS4-201ENST00000413601 FGF9P31371 208 aaPredicted RBP11.77□□□□□ -0.53
LIMS4-201ENST00000413601 EBI3Q14213 229 aa11.77□□□□□ -0.53
LIMS4-201ENST00000413601 NSUN5P1Q3KNT7 163 aa11.77□□□□□ -0.53
LIMS4-201ENST00000413601 MOB1BQ7L9L4 216 aa11.77□□□□□ -0.53
LIMS4-201ENST00000413601 CENPVQ7Z7K6 275 aaPredicted RBP11.77□□□□□ -0.53
LIMS4-201ENST00000413601 ODF3L1Q8IXM7 274 aa11.77□□□□□ -0.53
LIMS4-201ENST00000413601 IZUMO1Q8IYV9 350 aa11.77□□□□□ -0.53
LIMS4-201ENST00000413601 C5orf56Q8N8D9 126 aa11.77□□□□□ -0.53
LIMS4-201ENST00000413601 OR5AU1Q8NGC0 362 aa11.77□□□□□ -0.53
LIMS4-201ENST00000413601 YPEL2Q96QA6 119 aa11.77□□□□□ -0.53
LIMS4-201ENST00000413601 CITED2Q99967 270 aaPredicted RBP11.77□□□□□ -0.53
LIMS4-201ENST00000413601 VWFP04275 2813 aa11.76□□□□□ -0.53
LIMS4-201ENST00000413601 PLXNB1O43157 2135 aa11.76□□□□□ -0.53
LIMS4-201ENST00000413601 TXNL1O43396 289 aa11.76□□□□□ -0.53
LIMS4-201ENST00000413601 SLC2A2P11168 524 aaPredicted RBP11.76□□□□□ -0.53
LIMS4-201ENST00000413601 CD1BP29016 333 aa11.76□□□□□ -0.53
LIMS4-201ENST00000413601 NEDD8Q15843 81 aa11.76□□□□□ -0.53
LIMS4-201ENST00000413601 MOGAT2Q3SYC2 334 aa11.76□□□□□ -0.53
LIMS4-201ENST00000413601 KCTD21Q4G0X4 260 aa11.76□□□□□ -0.53
LIMS4-201ENST00000413601 Q8N6K4 173 aa11.76□□□□□ -0.53
LIMS4-201ENST00000413601 OR2T10Q8NGZ9 312 aa11.76□□□□□ -0.53
LIMS4-201ENST00000413601 CMSS1Q9BQ75 279 aaKnown RBP11.76□□□□□ -0.53
LIMS4-201ENST00000413601 OR51E2Q9H255 320 aa11.76□□□□□ -0.53
LIMS4-201ENST00000413601 C12orf4Q9NQ89 552 aa11.76□□□□□ -0.53
LIMS4-201ENST00000413601 SSR3Q9UNL2 185 aa11.76□□□□□ -0.53
LIMS4-201ENST00000413601 KCNK7Q9Y2U2 307 aa11.76□□□□□ -0.53
LIMS4-201ENST00000413601 NCBP2LA6PVI3 153 aaKnown RBP11.75□□□□□ -0.53
LIMS4-201ENST00000413601 FGF16O43320 207 aa11.75□□□□□ -0.53
LIMS4-201ENST00000413601 LANCL1O43813 399 aa11.75□□□□□ -0.53
LIMS4-201ENST00000413601 MOSP00540 346 aa11.75□□□□□ -0.53
LIMS4-201ENST00000413601 OR3A3P47888 321 aa11.75□□□□□ -0.53
LIMS4-201ENST00000413601 LY6G6FQ5SQ64 297 aa11.75□□□□□ -0.53
LIMS4-201ENST00000413601 C10orf99Q6UWK7 81 aa11.75□□□□□ -0.53
LIMS4-201ENST00000413601 NDUFA11Q86Y39 141 aa11.75□□□□□ -0.53
LIMS4-201ENST00000413601 OR2AK2Q8NG84 335 aa11.75□□□□□ -0.53
LIMS4-201ENST00000413601 RAB3CQ96E17 227 aa11.75□□□□□ -0.53
LIMS4-201ENST00000413601 Q9N2K0 584 aa11.75□□□□□ -0.53
LIMS4-201ENST00000413601 A0A075B6Q4 140 aa11.74□□□□□ -0.53
LIMS4-201ENST00000413601 ADARB2-AS1A8MUL3 147 aa11.74□□□□□ -0.53
LIMS4-201ENST00000413601 ST8SIA5O15466 376 aa11.74□□□□□ -0.53
LIMS4-201ENST00000413601 SCTP09683 121 aa11.74□□□□□ -0.53
LIMS4-201ENST00000413601 RAB6AP20340 208 aa11.74□□□□□ -0.53
LIMS4-201ENST00000413601 HLA-DRB3P79483 266 aa11.74□□□□□ -0.53
LIMS4-201ENST00000413601 LSAMPQ13449 338 aa11.74□□□□□ -0.53
LIMS4-201ENST00000413601 TCTEX1D4Q5JR98 221 aa11.74□□□□□ -0.53
LIMS4-201ENST00000413601 TPRA1Q86W33 373 aa11.74□□□□□ -0.53
LIMS4-201ENST00000413601 OR10R2Q8NGX6 335 aa11.74□□□□□ -0.53
LIMS4-201ENST00000413601 CHCHD6Q9BRQ6 235 aa11.74□□□□□ -0.53
LIMS4-201ENST00000413601 PARP12Q9H0J9 701 aaKnown RBP11.74□□□□□ -0.53
LIMS4-201ENST00000413601 IFI27L2Q9H2X8 130 aa11.74□□□□□ -0.53
LIMS4-201ENST00000413601 RNF167Q9H6Y7 350 aa11.74□□□□□ -0.53
LIMS4-201ENST00000413601 PLSCR3Q9NRY6 295 aa11.74□□□□□ -0.53
LIMS4-201ENST00000413601 OR1A1Q9P1Q5 309 aa11.74□□□□□ -0.53
LIMS4-201ENST00000413601 SLC23A1Q9UHI7 598 aa11.74□□□□□ -0.53
LIMS4-201ENST00000413601 MGAT4AQ9UM21 535 aa11.74□□□□□ -0.53
LIMS4-201ENST00000413601 SAA2-SAA4A0A096LPE2 208 aa11.73□□□□□ -0.53
LIMS4-201ENST00000413601 LOC100506127A0A0U1RQW1 187 aa11.73□□□□□ -0.53
LIMS4-201ENST00000413601 A0A1W2PRX2 142 aa11.73□□□□□ -0.53
LIMS4-201ENST00000413601 NOTOA8MTQ0 251 aa11.73□□□□□ -0.53
LIMS4-201ENST00000413601 RAB27BO00194 218 aa11.73□□□□□ -0.53
LIMS4-201ENST00000413601 CD3GP09693 182 aa11.73□□□□□ -0.53
LIMS4-201ENST00000413601 SAA2P0DJI9 122 aaPredicted RBP11.73□□□□□ -0.53
LIMS4-201ENST00000413601 GNB3P16520 340 aa11.73□□□□□ -0.53
LIMS4-201ENST00000413601 CD36P16671 472 aa11.73□□□□□ -0.53
LIMS4-201ENST00000413601 GADD45AP24522 165 aa11.73□□□□□ -0.53
LIMS4-201ENST00000413601 SDC2P34741 201 aa11.73□□□□□ -0.53
LIMS4-201ENST00000413601 CEACAM6P40199 344 aa11.73□□□□□ -0.53
LIMS4-201ENST00000413601 F2RL1P55085 397 aa11.73□□□□□ -0.53
LIMS4-201ENST00000413601 CD83Q01151 205 aa11.73□□□□□ -0.53
LIMS4-201ENST00000413601 ZNF833PQ6ZTB9 187 aa11.73□□□□□ -0.53
LIMS4-201ENST00000413601 Q8N9W7 124 aa11.73□□□□□ -0.53
LIMS4-201ENST00000413601 KCTD7Q96MP8 289 aa11.73□□□□□ -0.53
LIMS4-201ENST00000413601 NOL4LQ96MY1 436 aaPredicted RBP11.73□□□□□ -0.53
LIMS4-201ENST00000413601 MRPL20Q9BYC9 149 aaKnown RBP11.73□□□□□ -0.53
LIMS4-201ENST00000413601 ATG5Q9H1Y0 275 aa11.73□□□□□ -0.53
LIMS4-201ENST00000413601 DAPK2Q9UIK4 370 aa11.73□□□□□ -0.53
LIMS4-201ENST00000413601 METTL21EPA6NDL7 271 aa11.72□□□□□ -0.53
LIMS4-201ENST00000413601 LINC01548A6NM66 108 aa11.72□□□□□ -0.53
LIMS4-201ENST00000413601 SERPINE3A8MV23 424 aa11.72□□□□□ -0.53
LIMS4-201ENST00000413601 MFNGO00587 321 aa11.72□□□□□ -0.53
LIMS4-201ENST00000413601 HSPA12AO43301 675 aa11.72□□□□□ -0.53
LIMS4-201ENST00000413601 IGHG2P01859 326 aa11.72□□□□□ -0.53
LIMS4-201ENST00000413601 ZBTB25P24278 435 aa11.72□□□□□ -0.53
LIMS4-201ENST00000413601 MRPS15P82914 257 aaKnown RBP11.72□□□□□ -0.53
LIMS4-201ENST00000413601 MXD1Q05195 221 aa11.72□□□□□ -0.53
LIMS4-201ENST00000413601 SLC35E3Q7Z769 313 aa11.72□□□□□ -0.53
LIMS4-201ENST00000413601 ZNF329Q86UD4 541 aa11.72□□□□□ -0.53
LIMS4-201ENST00000413601 PTX4Q96A99 478 aa11.72□□□□□ -0.53
LIMS4-201ENST00000413601 R3HDM4Q96D70 268 aa11.72□□□□□ -0.53
LIMS4-201ENST00000413601 ABHD14BQ96IU4 210 aa11.72□□□□□ -0.53
LIMS4-201ENST00000413601 S1PR3Q99500 378 aa11.72□□□□□ -0.53
LIMS4-201ENST00000413601 NABP2Q9BQ15 211 aa11.72□□□□□ -0.53
LIMS4-201ENST00000413601 LIN7CQ9NUP9 197 aaKnown RBP11.72□□□□□ -0.53
LIMS4-201ENST00000413601 LINC00527Q9UJ94 153 aa11.72□□□□□ -0.53
LIMS4-201ENST00000413601 IGKV1-6A0A0C4DH72 117 aa11.71□□□□□ -0.53
LIMS4-201ENST00000413601 TCRBV4S1A1TA0A5B7 111 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms