RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 TRAT1Q6PIZ9 186 aa9.34□□□□□ -0.91
LIMS2-210ENST00000413578 CD200R1LQ6Q8B3 271 aa9.34□□□□□ -0.91
LIMS2-210ENST00000413578 C5orf24Q7Z6I8 188 aa9.34□□□□□ -0.91
LIMS2-210ENST00000413578 PRR18Q8N4B5 295 aa9.34□□□□□ -0.91
LIMS2-210ENST00000413578 TCTEX1D1Q8N7M0 179 aa9.34□□□□□ -0.91
LIMS2-210ENST00000413578 OR52L2PQ8NGH6 319 aa9.34□□□□□ -0.91
LIMS2-210ENST00000413578 MRPS24Q96EL2 167 aaKnown RBP9.34□□□□□ -0.91
LIMS2-210ENST00000413578 ZNF184Q99676 751 aaPredicted RBP9.34□□□□□ -0.91
LIMS2-210ENST00000413578 CST11Q9H112 138 aa9.34□□□□□ -0.91
LIMS2-210ENST00000413578 GHITMQ9H3K2 345 aa9.34□□□□□ -0.91
LIMS2-210ENST00000413578 TAF9BQ9HBM6 251 aa9.34□□□□□ -0.91
LIMS2-210ENST00000413578 OR2S2Q9NQN1 319 aa9.34□□□□□ -0.91
LIMS2-210ENST00000413578 JPT1Q9UK76 154 aa9.34□□□□□ -0.91
LIMS2-210ENST00000413578 NUBP2Q9Y5Y2 271 aa9.34□□□□□ -0.91
LIMS2-210ENST00000413578 A0A1W2PN81 502 aa9.33□□□□□ -0.92
LIMS2-210ENST00000413578 FAM90A7PA6NKC0 464 aa9.33□□□□□ -0.92
LIMS2-210ENST00000413578 FAM90A23PA8MXZ1 464 aa9.33□□□□□ -0.92
LIMS2-210ENST00000413578 HSPA12AO43301 675 aa9.33□□□□□ -0.92
LIMS2-210ENST00000413578 YPEL1O60688 119 aa9.33□□□□□ -0.92
LIMS2-210ENST00000413578 GLAP06280 429 aa9.33□□□□□ -0.92
LIMS2-210ENST00000413578 CHRNA7P36544 502 aa9.33□□□□□ -0.92
LIMS2-210ENST00000413578 PPP1CCP36873 323 aaKnown RBP9.33□□□□□ -0.92
LIMS2-210ENST00000413578 CX3CL1P78423 397 aa9.33□□□□□ -0.92
LIMS2-210ENST00000413578 HTD2P86397 168 aa9.33□□□□□ -0.92
LIMS2-210ENST00000413578 RIPK1Q13546 671 aa9.33□□□□□ -0.92
LIMS2-210ENST00000413578 GPR176Q14439 515 aa9.33□□□□□ -0.92
LIMS2-210ENST00000413578 ECSCRQ19T08 205 aa9.33□□□□□ -0.92
LIMS2-210ENST00000413578 C6orf141Q5SZD1 244 aa9.33□□□□□ -0.92
LIMS2-210ENST00000413578 ZNF660Q6AZW8 331 aaPredicted RBP9.33□□□□□ -0.92
LIMS2-210ENST00000413578 RAB12Q6IQ22 244 aa9.33□□□□□ -0.92
LIMS2-210ENST00000413578 OR13C5Q8NGS8 318 aa9.33□□□□□ -0.92
LIMS2-210ENST00000413578 CASTOR1Q8WTX7 329 aa9.33□□□□□ -0.92
LIMS2-210ENST00000413578 APH1BQ8WW43 257 aa9.33□□□□□ -0.92
LIMS2-210ENST00000413578 SMIM19Q96E16 107 aa9.33□□□□□ -0.92
LIMS2-210ENST00000413578 RHOVQ96L33 236 aa9.33□□□□□ -0.92
LIMS2-210ENST00000413578 YPEL2Q96QA6 119 aa9.33□□□□□ -0.92
LIMS2-210ENST00000413578 S100A13Q99584 98 aa9.33□□□□□ -0.92
LIMS2-210ENST00000413578 IFI27L2Q9H2X8 130 aa9.33□□□□□ -0.92
LIMS2-210ENST00000413578 NKX1-2Q9UD57 310 aaPredicted RBP9.33□□□□□ -0.92
LIMS2-210ENST00000413578 FOXA2Q9Y261 457 aaPredicted RBP9.33□□□□□ -0.92
LIMS2-210ENST00000413578 ORC6Q9Y5N6 252 aa9.33□□□□□ -0.92
LIMS2-210ENST00000413578 HERC2O95714 4834 aa9.32□□□□□ -0.92
LIMS2-210ENST00000413578 TRAV8-7A0A075B6U6 113 aa9.32□□□□□ -0.92
LIMS2-210ENST00000413578 SAA2-SAA4A0A096LPE2 208 aa9.32□□□□□ -0.92
LIMS2-210ENST00000413578 H3BNX3 289 aa9.32□□□□□ -0.92
LIMS2-210ENST00000413578 OGG1O15527 345 aa9.32□□□□□ -0.92
LIMS2-210ENST00000413578 HSPB1P04792 205 aaKnown RBP9.32□□□□□ -0.92
LIMS2-210ENST00000413578 SAA2P0DJI9 122 aaPredicted RBP9.32□□□□□ -0.92
LIMS2-210ENST00000413578 FSTP19883 344 aa9.32□□□□□ -0.92
LIMS2-210ENST00000413578 OR3A3P47888 321 aa9.32□□□□□ -0.92
LIMS2-210ENST00000413578 RPS11P62280 158 aaKnown RBP eCLIP9.32□□□□□ -0.92
LIMS2-210ENST00000413578 PITPNAQ00169 270 aa9.32□□□□□ -0.92
LIMS2-210ENST00000413578 LRRC36Q1X8D7 754 aa9.32□□□□□ -0.92
LIMS2-210ENST00000413578 FAM71F2Q6NXP2 309 aa9.32□□□□□ -0.92
LIMS2-210ENST00000413578 GLIPR1L1Q6UWM5 242 aa9.32□□□□□ -0.92
LIMS2-210ENST00000413578 HAPLN4Q86UW8 402 aa9.32□□□□□ -0.92
LIMS2-210ENST00000413578 MRPL30Q8TCC3 161 aaKnown RBP9.32□□□□□ -0.92
LIMS2-210ENST00000413578 PYDC1Q8WXC3 89 aa9.32□□□□□ -0.92
LIMS2-210ENST00000413578 Q96M66 194 aa9.32□□□□□ -0.92
LIMS2-210ENST00000413578 Q96MT0 163 aa9.32□□□□□ -0.92
LIMS2-210ENST00000413578 RDH12Q96NR8 316 aa9.32□□□□□ -0.92
LIMS2-210ENST00000413578 FGF20Q9NP95 211 aaPredicted RBP9.32□□□□□ -0.92
LIMS2-210ENST00000413578 PEX16Q9Y5Y5 336 aa9.32□□□□□ -0.92
LIMS2-210ENST00000413578 FCN1O00602 326 aa9.31□□□□□ -0.92
LIMS2-210ENST00000413578 RRHO14718 337 aa9.31□□□□□ -0.92
LIMS2-210ENST00000413578 ARPC1BO15143 372 aaKnown RBP9.31□□□□□ -0.92
LIMS2-210ENST00000413578 LALBAP00709 142 aa9.31□□□□□ -0.92
LIMS2-210ENST00000413578 IGHV3-11P01762 117 aa9.31□□□□□ -0.92
LIMS2-210ENST00000413578 ETV1P50549 477 aa9.31□□□□□ -0.92
LIMS2-210ENST00000413578 OR2G6Q5TZ20 316 aa9.31□□□□□ -0.92
LIMS2-210ENST00000413578 PYHIN1Q6K0P9 492 aa9.31□□□□□ -0.92
LIMS2-210ENST00000413578 CBR4Q8N4T8 237 aa9.31□□□□□ -0.92
LIMS2-210ENST00000413578 MUL1Q969V5 352 aa9.31□□□□□ -0.92
LIMS2-210ENST00000413578 FLYWCH2Q96CP2 140 aaKnown RBP9.31□□□□□ -0.92
LIMS2-210ENST00000413578 PGLYRP3Q96LB9 341 aa9.31□□□□□ -0.92
LIMS2-210ENST00000413578 OR14A2Q96R54 314 aa9.31□□□□□ -0.92
LIMS2-210ENST00000413578 OR4C12Q96R67 309 aa9.31□□□□□ -0.92
LIMS2-210ENST00000413578 SPATA25Q9BR10 227 aa9.31□□□□□ -0.92
LIMS2-210ENST00000413578 THAP7Q9BT49 309 aaPredicted RBP9.31□□□□□ -0.92
LIMS2-210ENST00000413578 FBXL15Q9H469 300 aa9.31□□□□□ -0.92
LIMS2-210ENST00000413578 KIAA1456Q9P272 454 aa9.31□□□□□ -0.92
LIMS2-210ENST00000413578 STUB1Q9UNE7 303 aa9.31□□□□□ -0.92
LIMS2-210ENST00000413578 GAB2Q9UQC2 676 aa9.31□□□□□ -0.92
LIMS2-210ENST00000413578 ERGIC3Q9Y282 383 aa9.31□□□□□ -0.92
LIMS2-210ENST00000413578 RPL36Q9Y3U8 105 aaKnown RBP9.31□□□□□ -0.92
LIMS2-210ENST00000413578 TRBV5-7A0A0A0MS05 114 aa9.3□□□□□ -0.92
LIMS2-210ENST00000413578 MAS1P04201 325 aa9.3□□□□□ -0.92
LIMS2-210ENST00000413578 CT45A6P0DMU7 189 aa9.3□□□□□ -0.92
LIMS2-210ENST00000413578 CT45A5P0DMU8 189 aa9.3□□□□□ -0.92
LIMS2-210ENST00000413578 CT45A7P0DMV0 189 aa9.3□□□□□ -0.92
LIMS2-210ENST00000413578 SNRPBP14678 240 aaKnown RBP9.3□□□□□ -0.92
LIMS2-210ENST00000413578 MGMTP16455 207 aa9.3□□□□□ -0.92
LIMS2-210ENST00000413578 FUT3P21217 361 aa9.3□□□□□ -0.92
LIMS2-210ENST00000413578 HAGHQ16775 308 aa9.3□□□□□ -0.92
LIMS2-210ENST00000413578 Q499Y3 187 aa9.3□□□□□ -0.92
LIMS2-210ENST00000413578 AKIRIN2Q53H80 203 aa9.3□□□□□ -0.92
LIMS2-210ENST00000413578 DMKNQ6E0U4 476 aaPredicted RBP9.3□□□□□ -0.92
LIMS2-210ENST00000413578 FAM131AQ6UXB0 335 aa9.3□□□□□ -0.92
LIMS2-210ENST00000413578 IL34Q6ZMJ4 242 aa9.3□□□□□ -0.92
LIMS2-210ENST00000413578 SGPP2Q8IWX5 399 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms